Click here to switch to the map view.

The map label for this gene is yiaF [H]

Identifier: 194736381

GI number: 194736381

Start: 1231533

End: 1232294

Strand: Direct

Name: yiaF [H]

Synonym: SeSA_A1256

Alternate gene names: 194736381

Gene position: 1231533-1232294 (Clockwise)

Preceding gene: 194738103

Following gene: 194734853

Centisome position: 26.15

GC content: 46.19

Gene sequence:

>762_bases
ATGGCCAATACTAGCTGGATGCGCTCATTTACTCAGCGTTGGGGAAAATACGTTATCGTGCCGCTCGTGATCGCGATGCT
GACCGGTTGCGAAGGAAAGGGCGATAGTTCACGACGGGCTTTCGTTGAGTATTTGAATACGCAAATCATTACGTCTCCCG
TGGTGGGCGTCTGTGAGTTGACGCCAGCCCAACGTCAGGCTTTTGGTCATTACGCCGATGACTACGATGTACTATTAGCT
GCCTACGGGCAAATCTTTGCTGTGGTGTATGAGACCGGCCAGGAGGATAAGATCACCGGTGTTATTCAGTCTGAGCGTGA
TAATCTGGTTTTCCTGAACGAGCTACGTGTGGCTCGCGACGTAAACAATCGATTTATCCTTCGGTTGAAAAATGTGAGTA
GTGAAAACAGAAAAAAACATTCTGCTTTAAAGTTCCCCTCTGATGTGAAGCTTGTCTTTGACGCTGCGTGGAATAAAACC
GTAACACCGCTGGATGAGACGATGACTCGCTATTATTTTCTGCGCGGAAAGCGGCTCGACCAACTGGTCGCAATGGGCGA
GTTTCTGCAAAAACAGGGAAATAAAGTCCGCTTTGAAACGAATGGAAAAGCGGTTTTTGCCGACCTGGCAGCAAAAGAAC
ACTTTCAGGATCAACAATTTAATTTTTTCATTACGCAGAATGATATAAACCATCTTACTCAGCAGATGGTTGAATTTATA
AATAGTCAACAAGATGCGGCTGATGCTGGCGGCGTTAATTAA

Upstream 100 bases:

>100_bases
TTTCTCATAATATTTTTGTTTTGCTGTATCCGACGCATTTTTACCGTTGTGCACTGTTTATTCTTGCGATCCGGATTTCG
GCGTGTTTAAGGACGAACAG

Downstream 100 bases:

>100_bases
AGGAATGTGTCGTGAGGTGAAGCAATGTTAGGGGGGCGTAAACTCATCGCGAGATGGAATTTAACGAGTCGCAAGGGGAA
GGTTTCAGGACAGTAAACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MANTSWMRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQAFGHYADDYDVLLA
AYGQIFAVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFILRLKNVSSENRKKHSALKFPSDVKLVFDAAWNKT
VTPLDETMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFI
NSQQDAADAGGVN

Sequences:

>Translated_253_residues
MANTSWMRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQAFGHYADDYDVLLA
AYGQIFAVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFILRLKNVSSENRKKHSALKFPSDVKLVFDAAWNKT
VTPLDETMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFI
NSQQDAADAGGVN
>Mature_252_residues
ANTSWMRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCELTPAQRQAFGHYADDYDVLLAA
YGQIFAVVYETGQEDKITGVIQSERDNLVFLNELRVARDVNNRFILRLKNVSSENRKKHSALKFPSDVKLVFDAAWNKTV
TPLDETMTRYYFLRGKRLDQLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFIN
SQQDAADAGGVN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082290, Length=194, Percent_Identity=28.3505154639175, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021413 [H]

Pfam domain/function: PF11254 DUF3053 [H]

EC number: NA

Molecular weight: Translated: 28812; Mature: 28681

Theoretical pI: Translated: 7.56; Mature: 7.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANTSWMRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCEL
CCCHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC
TPAQRQAFGHYADDYDVLLAAYGQIFAVVYETGQEDKITGVIQSERDNLVFLNELRVARD
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHH
VNNRFILRLKNVSSENRKKHSALKFPSDVKLVFDAAWNKTVTPLDETMTRYYFLRGKRLD
CCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHH
QLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFI
HHHHHHHHHHHCCCEEEEEECCCEEEHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH
NSQQDAADAGGVN
CCCCCCCCCCCCC
>Mature Secondary Structure 
ANTSWMRSFTQRWGKYVIVPLVIAMLTGCEGKGDSSRRAFVEYLNTQIITSPVVGVCEL
CCHHHHHHHHHHHCCEEHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHCC
TPAQRQAFGHYADDYDVLLAAYGQIFAVVYETGQEDKITGVIQSERDNLVFLNELRVARD
CHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEHHHHHHHHH
VNNRFILRLKNVSSENRKKHSALKFPSDVKLVFDAAWNKTVTPLDETMTRYYFLRGKRLD
CCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHH
QLVAMGEFLQKQGNKVRFETNGKAVFADLAAKEHFQDQQFNFFITQNDINHLTQQMVEFI
HHHHHHHHHHHCCCEEEEEECCCEEEHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHH
NSQQDAADAGGVN
CCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]