Click here to switch to the map view.

The map label for this gene is yggN [H]

Identifier: 194736353

GI number: 194736353

Start: 3166710

End: 3167429

Strand: Reverse

Name: yggN [H]

Synonym: SeSA_A3281

Alternate gene names: 194736353

Gene position: 3167429-3166710 (Counterclockwise)

Preceding gene: 194736940

Following gene: 194734155

Centisome position: 67.26

GC content: 54.44

Gene sequence:

>720_bases
ATGATGCGCAAAACGCTGCTGGCGGCAGTGCTAACGTTGACGGCGATGGCCGCTCATGCAGATTACAAATGCAGTGTCAC
GCCGCGTGACGATGTGATCCTGAGTCCACAAACGGTGCAGGTGAAAGGTGAAAACGGCAACCTGGTGATCACGCCGGACG
GCAATGTGATGTACAACGGTAAGCAGTACACCCTTAGCGCCGCGCAACGCGAGCAAGCGAAAGATTACCAGGCGGAACTG
CGAAGCGCGCTGCCGTGGATTGATGAGGGCGCCCGATCGCGCGTCGAAAAAGGCCGCGTGGCGCTGGATAAAATCATCGC
TAAAGAGGTGGGCGAAAGCAGCAACATGCGTAGCCGTCTGACGAAGCTTGATGCGCAATTAAAAGCGCAAATGAACCGTA
TTATCGAACATCGTACGGACGGCCTGACGTTCCACTATAAGGCTATCGACCAGGTGCGTGCCGACGGTCAGCAGTTGGTG
AATCAGGCGATGGGCGGTATTTTGCAGGACAGCATTAACGAAATGGGCGCCAAAGCGGTGCTTAAAGGCGGCGGCAATCC
TTTACAGGGCGTGATGGGCAGTCTCGGTGGTTTGCAAACCGCTATCCAGAACGAATGGAAAAATCAGGAGAAAGATTTCC
AGCAGTTTGGCAAAGATGTCTGTAGCCGCGTAGTAACCTTAGAAGATAGCCGCAAAGCGCTGGTTGGCAGCCTGAAGTAA

Upstream 100 bases:

>100_bases
AACCTTGAAGAAGTCCGAACCAGCGAACTTTTCGACGTTTGGTGGGACTAATGAGTACAGGGTCGGCAAATGCCGGCCCG
CTTTGTCTTGAGGGAAAGTT

Downstream 100 bases:

>100_bases
TCTTTCCTTTTTAAACAATGGCGTAGATCGTATCTGCGCCTTTTTATTCTGTTTTTTCCTGCATTTTGTTATCCATCTCT
AAAAAATACTCTCTGTTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MMRKTLLAAVLTLTAMAAHADYKCSVTPRDDVILSPQTVQVKGENGNLVITPDGNVMYNGKQYTLSAAQREQAKDYQAEL
RSALPWIDEGARSRVEKGRVALDKIIAKEVGESSNMRSRLTKLDAQLKAQMNRIIEHRTDGLTFHYKAIDQVRADGQQLV
NQAMGGILQDSINEMGAKAVLKGGGNPLQGVMGSLGGLQTAIQNEWKNQEKDFQQFGKDVCSRVVTLEDSRKALVGSLK

Sequences:

>Translated_239_residues
MMRKTLLAAVLTLTAMAAHADYKCSVTPRDDVILSPQTVQVKGENGNLVITPDGNVMYNGKQYTLSAAQREQAKDYQAEL
RSALPWIDEGARSRVEKGRVALDKIIAKEVGESSNMRSRLTKLDAQLKAQMNRIIEHRTDGLTFHYKAIDQVRADGQQLV
NQAMGGILQDSINEMGAKAVLKGGGNPLQGVMGSLGGLQTAIQNEWKNQEKDFQQFGKDVCSRVVTLEDSRKALVGSLK
>Mature_239_residues
MMRKTLLAAVLTLTAMAAHADYKCSVTPRDDVILSPQTVQVKGENGNLVITPDGNVMYNGKQYTLSAAQREQAKDYQAEL
RSALPWIDEGARSRVEKGRVALDKIIAKEVGESSNMRSRLTKLDAQLKAQMNRIIEHRTDGLTFHYKAIDQVRADGQQLV
NQAMGGILQDSINEMGAKAVLKGGGNPLQGVMGSLGGLQTAIQNEWKNQEKDFQQFGKDVCSRVVTLEDSRKALVGSLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789328, Length=239, Percent_Identity=87.8661087866109, Blast_Score=443, Evalue=1e-126,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021307 [H]

Pfam domain/function: PF11101 DUF2884 [H]

EC number: NA

Molecular weight: Translated: 26201; Mature: 26201

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKTLLAAVLTLTAMAAHADYKCSVTPRDDVILSPQTVQVKGENGNLVITPDGNVMYNG
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCEEEEECCCCCEEEECCCCEEECC
KQYTLSAAQREQAKDYQAELRSALPWIDEGARSRVEKGRVALDKIIAKEVGESSNMRSRL
CEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TKLDAQLKAQMNRIIEHRTDGLTFHYKAIDQVRADGQQLVNQAMGGILQDSINEMGAKAV
HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKGGGNPLQGVMGSLGGLQTAIQNEWKNQEKDFQQFGKDVCSRVVTLEDSRKALVGSLK
HCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MMRKTLLAAVLTLTAMAAHADYKCSVTPRDDVILSPQTVQVKGENGNLVITPDGNVMYNG
CCHHHHHHHHHHHHHHHHCCCCEEECCCCCCEEECCCEEEEECCCCCEEEECCCCEEECC
KQYTLSAAQREQAKDYQAELRSALPWIDEGARSRVEKGRVALDKIIAKEVGESSNMRSRL
CEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
TKLDAQLKAQMNRIIEHRTDGLTFHYKAIDQVRADGQQLVNQAMGGILQDSINEMGAKAV
HHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKGGGNPLQGVMGSLGGLQTAIQNEWKNQEKDFQQFGKDVCSRVVTLEDSRKALVGSLK
HCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]