| Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
|---|---|
| Accession | NC_011094 |
| Length | 4,709,075 |
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The map label for this gene is fliF [H]
Identifier: 194736346
GI number: 194736346
Start: 2033643
End: 2035382
Strand: Direct
Name: fliF [H]
Synonym: SeSA_A2127
Alternate gene names: 194736346
Gene position: 2033643-2035382 (Clockwise)
Preceding gene: 194737238
Following gene: 194736557
Centisome position: 43.19
GC content: 56.78
Gene sequence:
>1740_bases GTGAGTCTTGTTCCACTTTGCAAAAAACGCCGTCCACGATCAGTCACGAGGTGCGAGATGAGTGCGACTGCATCGACTGC AACCCAACCTAAACCTCTCGAGTGGCTTAATCGCCTACGCGCGAATCCCCGAATTCCGTTAATTGTAGCGGGTTCCGCTG CCGTGGCGATCGTCGTTGCGATGGTGCTGTGGGCCAAAACGCCCGATTACCGCACGCTATTTAGCAACCTTTCCGATCAG GACGGCGGCGCGATCGTCGCGCAGTTGACCCAGATGAATATCCCCTATCGCTTTGCCAATGGCAGCGGCGCGATTGAAGT GCCCGCCGACAAAGTGCATGAACTGCGTCTGCGTCTGGCGCAGCAGGGGCTGCCTAAAGGCGGCGCGGTAGGCTTTGAAC TGCTTGATCAGGAAAAATTCGGTATCAGTCAGTTCAGCGAGCAGGTGAATTATCAGCGCGCGCTGGAAGGTGAACTGGCC CGGACGATCGAGACGCTGGGTCCGGTAAAAAGCGCCCGTGTTCACCTGGCGATGCCAAAGCCGTCGCTATTTGTGCGGGA ACAAAAATCCCCTTCCGCCTCCGTCACCGTCACACTGGAACCGGGACGGGCGCTGGATGAAGGACAAATTAGCGCCGTGG TACATCTGGTTTCCAGCGCTGTCGCCGGTTTGCCGCCAGGAAACGTCACTCTGGTCGATCAATCCGGTCATCTGCTCACG CAATCCAATACCAGCGGTCGCGACCTTAATGACGCGCAATTAAAATTTGCTAATGATGTGGAAAGCCGCATCCAACGCCG TATCGAAGCCATTCTGTCGCCTATCGTCGGGAACGGTAATGTTCACGCTCAGGTAACCGCCCAGTTGGATTTTGCCAATA AAGAACAGACGGAAGAGCACTACAGCCCGAACGGCGATGCGTCGAAGGCCACCCTGCGTTCACGTCAGTTGAATATTAGC GAACAGGTAGGCGCGGGCTATCCCGGCGGCGTGCCTGGCGCGCTGTCGAACCAACCAGCGCCGCCTAACGAGGCGCCGAT CGCCACGCCGCCGACCAATCAACAAAACGCGCAGAATACGCCACAAACCAGCACCAGTACTAACAGTAACAGCGCTGGCC CGCGCAATACACAGCGTAATGAAACCAGTAACTACGAAGTGGACCGCACCATTCGTCACACCAAAATGAATGTGGGCGAT ATTGAGCGTCTCTCCGTGGCCGTCGTGGTGAATTACAAAACGCTGGCGGACGGCAAACCGCTGCCATTGACCGCCGATCA GATGAAACAGATCGAGGATTTAACCCGTGAAGCGATGGGTTTTTCTGATAAACGCGGCGATACGCTAAACGTGGTGAATT CACCGTTTAGCGCAGTGGATAACACCGGCGGCGAACTGCCCTTCTGGCAACAGCAGTCCTTTATCGATCAGTTGCTCGCG GCAGGTCGCTGGTTGCTGGTACTGGTGGTGGCCTGGATTCTGTGGCGCAAAGCGGTACGTCCGCAGTTGACGCGCCGTGT TGAAGAAGCGAAAGCGGCGCAGGAACAGGCGCAGGTTCGTCAGGAAACCGAAGAAGCCGTGGAAGTACGCCTTAGCAAAG ACGAGCAGCTCCAGCAACGCCGGGCTAACCAGCGTCTGGGCGCTGAGGTGATGAGCCAGCGTATTCGCGAAATGTCAGAC AACGATCCGCGCGTGGTGGCGCTGGTCATTCGCCAGTGGATGAGTAACGATCATGAGTAA
Upstream 100 bases:
>100_bases GGCGTTAAATAACGATAAAAAACCTCGGTTTTTAGCGCATAGAAAAATTCGAAACCACAAATAATGAGACCGTCAATTTT TCGAGTTTGCTGACCCGGGA
Downstream 100 bases:
>100_bases TCTTAGCGGTACCGATAAAAGCGTCATTTTGTTGATGACCATTGGCGAAGACCGGGCGGCAGAGGTGTTTAAACACCTCT CCACCCGCGAAGTGCAGGCG
Product: flagellar MS-ring protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 579; Mature: 578
Protein sequence:
>579_residues MSLVPLCKKRRPRSVTRCEMSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIVVAMVLWAKTPDYRTLFSNLSDQ DGGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELA RTIETLGPVKSARVHLAMPKPSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSSAVAGLPPGNVTLVDQSGHLLT QSNTSGRDLNDAQLKFANDVESRIQRRIEAILSPIVGNGNVHAQVTAQLDFANKEQTEEHYSPNGDASKATLRSRQLNIS EQVGAGYPGGVPGALSNQPAPPNEAPIATPPTNQQNAQNTPQTSTSTNSNSAGPRNTQRNETSNYEVDRTIRHTKMNVGD IERLSVAVVVNYKTLADGKPLPLTADQMKQIEDLTREAMGFSDKRGDTLNVVNSPFSAVDNTGGELPFWQQQSFIDQLLA AGRWLLVLVVAWILWRKAVRPQLTRRVEEAKAAQEQAQVRQETEEAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSD NDPRVVALVIRQWMSNDHE
Sequences:
>Translated_579_residues MSLVPLCKKRRPRSVTRCEMSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIVVAMVLWAKTPDYRTLFSNLSDQ DGGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELA RTIETLGPVKSARVHLAMPKPSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSSAVAGLPPGNVTLVDQSGHLLT QSNTSGRDLNDAQLKFANDVESRIQRRIEAILSPIVGNGNVHAQVTAQLDFANKEQTEEHYSPNGDASKATLRSRQLNIS EQVGAGYPGGVPGALSNQPAPPNEAPIATPPTNQQNAQNTPQTSTSTNSNSAGPRNTQRNETSNYEVDRTIRHTKMNVGD IERLSVAVVVNYKTLADGKPLPLTADQMKQIEDLTREAMGFSDKRGDTLNVVNSPFSAVDNTGGELPFWQQQSFIDQLLA AGRWLLVLVVAWILWRKAVRPQLTRRVEEAKAAQEQAQVRQETEEAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSD NDPRVVALVIRQWMSNDHE >Mature_578_residues SLVPLCKKRRPRSVTRCEMSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIVVAMVLWAKTPDYRTLFSNLSDQD GGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRLAQQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELAR TIETLGPVKSARVHLAMPKPSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSSAVAGLPPGNVTLVDQSGHLLTQ SNTSGRDLNDAQLKFANDVESRIQRRIEAILSPIVGNGNVHAQVTAQLDFANKEQTEEHYSPNGDASKATLRSRQLNISE QVGAGYPGGVPGALSNQPAPPNEAPIATPPTNQQNAQNTPQTSTSTNSNSAGPRNTQRNETSNYEVDRTIRHTKMNVGDI ERLSVAVVVNYKTLADGKPLPLTADQMKQIEDLTREAMGFSDKRGDTLNVVNSPFSAVDNTGGELPFWQQQSFIDQLLAA GRWLLVLVVAWILWRKAVRPQLTRRVEEAKAAQEQAQVRQETEEAVEVRLSKDEQLQQRRANQRLGAEVMSQRIREMSDN DPRVVALVIRQWMSNDHE
Specific function: The M ring may be actively involved in energy transduction [H]
COG id: COG1766
COG function: function code NU; Flagellar biosynthesis/type III secretory pathway lipoprotein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fliF family [H]
Homologues:
Organism=Escherichia coli, GI1788248, Length=555, Percent_Identity=86.1261261261261, Blast_Score=956, Evalue=0.0,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013556 - InterPro: IPR000067 - InterPro: IPR006182 [H]
Pfam domain/function: PF01514 YscJ_FliF; PF08345 YscJ_FliF_C [H]
EC number: NA
Molecular weight: Translated: 63499; Mature: 63368
Theoretical pI: Translated: 8.64; Mature: 8.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVPLCKKRRPRSVTRCEMSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIVVA CCCCCCHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHH MVLWAKTPDYRTLFSNLSDQDGGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRLA HHHHCCCCCHHHHHHCCCCCCCCCEEHHHHHCCCCEEECCCCCCEECCHHHHHHHHHHHH QQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVKSARVHLAMPK HCCCCCCCCCCHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC PSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSSAVAGLPPGNVTLVDQSGHLLT CCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE QSNTSGRDLNDAQLKFANDVESRIQRRIEAILSPIVGNGNVHAQVTAQLDFANKEQTEEH ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHH YSPNGDASKATLRSRQLNISEQVGAGYPGGVPGALSNQPAPPNEAPIATPPTNQQNAQNT CCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQTSTSTNSNSAGPRNTQRNETSNYEVDRTIRHTKMNVGDIERLSVAVVVNYKTLADGKP CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCC LPLTADQMKQIEDLTREAMGFSDKRGDTLNVVNSPFSAVDNTGGELPFWQQQSFIDQLLA CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHH AGRWLLVLVVAWILWRKAVRPQLTRRVEEAKAAQEQAQVRQETEEAVEVRLSKDEQLQQR CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RANQRLGAEVMSQRIREMSDNDPRVVALVIRQWMSNDHE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure SLVPLCKKRRPRSVTRCEMSATASTATQPKPLEWLNRLRANPRIPLIVAGSAAVAIVVA CCCCCHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHH MVLWAKTPDYRTLFSNLSDQDGGAIVAQLTQMNIPYRFANGSGAIEVPADKVHELRLRLA HHHHCCCCCHHHHHHCCCCCCCCCEEHHHHHCCCCEEECCCCCCEECCHHHHHHHHHHHH QQGLPKGGAVGFELLDQEKFGISQFSEQVNYQRALEGELARTIETLGPVKSARVHLAMPK HCCCCCCCCCCHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC PSLFVREQKSPSASVTVTLEPGRALDEGQISAVVHLVSSAVAGLPPGNVTLVDQSGHLLT CCEEEEECCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE QSNTSGRDLNDAQLKFANDVESRIQRRIEAILSPIVGNGNVHAQVTAQLDFANKEQTEEH ECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHH YSPNGDASKATLRSRQLNISEQVGAGYPGGVPGALSNQPAPPNEAPIATPPTNQQNAQNT CCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PQTSTSTNSNSAGPRNTQRNETSNYEVDRTIRHTKMNVGDIERLSVAVVVNYKTLADGKP CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCC LPLTADQMKQIEDLTREAMGFSDKRGDTLNVVNSPFSAVDNTGGELPFWQQQSFIDQLLA CCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCCCHHHHHHHHHHHH AGRWLLVLVVAWILWRKAVRPQLTRRVEEAKAAQEQAQVRQETEEAVEVRLSKDEQLQQR CCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH RANQRLGAEVMSQRIREMSDNDPRVVALVIRQWMSNDHE HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2544561; 11677609; 1551848 [H]