Click here to switch to the map view.

The map label for this gene is yecR [H]

Identifier: 194736237

GI number: 194736237

Start: 2006664

End: 2006999

Strand: Direct

Name: yecR [H]

Synonym: SeSA_A2089

Alternate gene names: 194736237

Gene position: 2006664-2006999 (Clockwise)

Preceding gene: 194735836

Following gene: 194734185

Centisome position: 42.61

GC content: 53.27

Gene sequence:

>336_bases
ATGAAGCCTCTTATTTTTACTCTTTCACTGCTAGCCCTGACGGGATGCACCATTACTCGACAAGCGCAGGTCAGCGAAGC
CAGCCCGATAAGCGGCATCGTGCGCCTGACGTATAACCAGCCGCTATTTTTTACTTCACGGACAGATGACTATGTATCTC
ACGGGACCGCAACACGCGAATGCCAGCAGATGGGCTATGCCGATGCCGTTTCGTTTGGTCAGCCGGTAGGAACCTGTAGC
ATTTATGCGGGCTCGTTGTGTCTGAACACCCGATTTACCCTCTCCTGGCAGTGCCGGGGCGTTGCCGTCCCGCAAATCAT
GCCGCTTTATTATTAA

Upstream 100 bases:

>100_bases
CCGTTACCTTTAATCAAGGCGAATCCGTAAGTTATTCCAGCCATTGACGGTGCAAGACACGAGGTAGCATGGTCTGATAC
CGAATTGTCGGAGCGATTTT

Downstream 100 bases:

>100_bases
GGCGGCTGGCTTAACGCCGACACCATCTACAATGGAGGAGAGTGCAAGGTCGCTATTGCCAGCATGAAGGTGCTGGCTTT
CCTTTATTTTTATACACTAT

Product: putative outer membrane lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MKPLIFTLSLLALTGCTITRQAQVSEASPISGIVRLTYNQPLFFTSRTDDYVSHGTATRECQQMGYADAVSFGQPVGTCS
IYAGSLCLNTRFTLSWQCRGVAVPQIMPLYY

Sequences:

>Translated_111_residues
MKPLIFTLSLLALTGCTITRQAQVSEASPISGIVRLTYNQPLFFTSRTDDYVSHGTATRECQQMGYADAVSFGQPVGTCS
IYAGSLCLNTRFTLSWQCRGVAVPQIMPLYY
>Mature_111_residues
MKPLIFTLSLLALTGCTITRQAQVSEASPISGIVRLTYNQPLFFTSRTDDYVSHGTATRECQQMGYADAVSFGQPVGTCS
IYAGSLCLNTRFTLSWQCRGVAVPQIMPLYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788215, Length=90, Percent_Identity=62.2222222222222, Blast_Score=119, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12197; Mature: 12197

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPLIFTLSLLALTGCTITRQAQVSEASPISGIVRLTYNQPLFFTSRTDDYVSHGTATRE
CCCHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCHHHCCCCHHH
CQQMGYADAVSFGQPVGTCSIYAGSLCLNTRFTLSWQCRGVAVPQIMPLYY
HHHCCCHHHHCCCCCCCEEEEEECEEEECCEEEEEEEECCEECCCEECCCC
>Mature Secondary Structure
MKPLIFTLSLLALTGCTITRQAQVSEASPISGIVRLTYNQPLFFTSRTDDYVSHGTATRE
CCCHHHHHHHHHHHCCCEECCCCCCCCCCCCEEEEEEECCCEEEECCCCCHHHCCCCHHH
CQQMGYADAVSFGQPVGTCSIYAGSLCLNTRFTLSWQCRGVAVPQIMPLYY
HHHCCCHHHHCCCCCCCEEEEEECEEEECCEEEEEEEECCEECCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]