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The map label for this gene is dnaQ [H]

Identifier: 194736138

GI number: 194736138

Start: 305400

End: 306140

Strand: Direct

Name: dnaQ [H]

Synonym: SeSA_A0294

Alternate gene names: 194736138

Gene position: 305400-306140 (Clockwise)

Preceding gene: 194735250

Following gene: 194734614

Centisome position: 6.49

GC content: 51.96

Gene sequence:

>741_bases
ATGACCGATATGAGCACTGCAATTACACGACAGATTGTCCTCGATACCGAAACCACCGGTATGAACCAGATAGGCGCGCA
CTATGAAGGTCACAAGATTATTGAGATCGGTGCGGTTGAGGTGATAAACCGTCGTCTGACCGGTAATAACTTCCACGTTT
ACCTGAAGCCGGATCGGCTGGTGGATCCGGAAGCGTTTGGCGTACACGGCATCGCCGATGAGTTTCTGCTGGATAAGCCG
GTTTTTGCTGATGTGGTCGATGAGTTTCTCGATTATATCCGCGGCGCGGAGCTGGTCATCCATAACGCATCGTTCGATAT
CGGCTTTATGGATTATGAGTTTGGTCTGCTTAAACGCGATATTCCTAAAACCAATACTTTCTGCAAAGTTACCGACAGCC
TGGCGTTGGCGCGGAAAATGTTCCCCGGCAAGCGTAACAGCCTTGATGCGCTGTGTTCGCGTTATGAGATAGATAATAGC
AAACGTACTTTGCACGGCGCATTGCTCGATGCCCAGATCCTTGCTGAAGTGTATCTGGCGATGACGGGCGGGCAAACGTC
CATGACGTTTGCGATGGAAGGAGAGACGCAACGGCAGCAAGGTGAAGAGACCATTCAGCGAATCGTTCGCCAGGCCAGCC
GGTTACGGGTCGTTTTTGCCTCTGATGAAGAGCTGGCTGCGCATGAATCGCGGCTTGATCTGGTGCAGAAAAAGGGCGGA
AGTTGCCTTTGGCGGGCGTAA

Upstream 100 bases:

>100_bases
TCCCCAGGCAAGAGCCATCGGTGAAAATTTCTACCTGTTTAAGCATCTCTGGTAGACTTCCTGTAATTGAAATCGATAAC
AAAACGCAAGTCTGACATAA

Downstream 100 bases:

>100_bases
TTTATTCCTTTTTAGGCTATAAAAATCATCCTTCGGGCGATTTTTGCAGCAACTGATTCAAAAGGTGAGAAAAAGCGTTG
ACGGGCGACACCGCAAACCG

Product: DNA polymerase III subunit epsilon

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MTDMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKP
VFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNS
KRTLHGALLDAQILAEVYLAMTGGQTSMTFAMEGETQRQQGEETIQRIVRQASRLRVVFASDEELAAHESRLDLVQKKGG
SCLWRA

Sequences:

>Translated_246_residues
MTDMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKP
VFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNS
KRTLHGALLDAQILAEVYLAMTGGQTSMTFAMEGETQRQQGEETIQRIVRQASRLRVVFASDEELAAHESRLDLVQKKGG
SCLWRA
>Mature_245_residues
TDMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRLVDPEAFGVHGIADEFLLDKPV
FADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRDIPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSK
RTLHGALLDAQILAEVYLAMTGGQTSMTFAMEGETQRQQGEETIQRIVRQASRLRVVFASDEELAAHESRLDLVQKKGGS
CLWRA

Specific function: DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease [H]

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786409, Length=243, Percent_Identity=93.4156378600823, Blast_Score=483, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006054
- InterPro:   IPR006309
- InterPro:   IPR006055
- InterPro:   IPR013520
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00929 Exonuc_X-T [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 27617; Mature: 27486

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRL
CCCHHHHHHHEEEEECCCCCCHHHCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCC
VDPEAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRD
CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHCC
IPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILAEVYLA
CCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MTGGQTSMTFAMEGETQRQQGEETIQRIVRQASRLRVVFASDEELAAHESRLDLVQKKGG
HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCC
SCLWRA
CEECCC
>Mature Secondary Structure 
TDMSTAITRQIVLDTETTGMNQIGAHYEGHKIIEIGAVEVINRRLTGNNFHVYLKPDRL
CCHHHHHHHEEEEECCCCCCHHHCCCCCCCEEEEEHHHHHHHHHCCCCCEEEEECCCCC
VDPEAFGVHGIADEFLLDKPVFADVVDEFLDYIRGAELVIHNASFDIGFMDYEFGLLKRD
CCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHCC
IPKTNTFCKVTDSLALARKMFPGKRNSLDALCSRYEIDNSKRTLHGALLDAQILAEVYLA
CCCCCCEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
MTGGQTSMTFAMEGETQRQQGEETIQRIVRQASRLRVVFASDEELAAHESRLDLVQKKGG
HCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCC
SCLWRA
CEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3023634; 6316347; 3540531; 9278503; 1575709 [H]