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The map label for this gene is 194736056

Identifier: 194736056

GI number: 194736056

Start: 321627

End: 322118

Strand: Direct

Name: 194736056

Synonym: SeSA_A0312

Alternate gene names: NA

Gene position: 321627-322118 (Clockwise)

Preceding gene: 194734020

Following gene: 194735441

Centisome position: 6.83

GC content: 51.83

Gene sequence:

>492_bases
ATGCCTTTTGCACTGCTCCTGCTTTCCGGATGCGGCAGTAGCGATGCGTTACCTGACCTCGAATCACAGCGACTCGACCT
GAGCGTGAAAGCCTCTGATAAGGTGAATCCTGACAATCAGAAGAAGGCCGCGCCCATTGAGATACGTGTTTATGAACTAA
AAAATGACGCCGCTTTCACGACAGCCGATTACTGGTCGCTCCATGACAACGACAAATCCGTCCTTACCGACGATTTAGTG
CGTCGCGACAGCTTTATTTTGCGTCCCGGCGAAGAGAAAAAACTGCGTCGCCCGCTGAATGCGCAGACCACGGCAATCGG
CGTACTGGCCGGATATCGTAACCTGGCCAAATCGGTCTGGCGGGTAACCTACAAAATCCCGGAAGCCCCGGAAAAAGCCT
GGTACAGCAACTTTATACCGGGGAAAGGAAAAGTGCAGTTGGATGCGGAACTGGAACAAAGCGCTATTGTAATTACGGAA
CGGGATAAATGA

Upstream 100 bases:

>100_bases
CCGGCCAGATTTATATCTGGCCGGATTTATTGTTTTGATTTTAAAGGAATTTACAGTGAATAAATGGCGTAACCCCACTC
GGCGGTTATGTGCGGTAGCT

Downstream 100 bases:

>100_bases
ATTATGAGCTGGAATGACCGCGTAGTCTGGAGTGAAGGACAATTTTTACTGCCGCAGATGTTTCAGCAGCAAGAGCGTTA
TCTGGAACACGTCATGCATT

Product: type VI secretion lipoprotein, family protein

Products: NA

Alternate protein names: Type VI Secretion Lipoprotein; Type VI Secretion Lipoprotein/VasD; SciN Protein; Replication/Virulence Associated Protein; Outer Membrane Lipoprotein; Type VI Secretion; Type VI Secretion System Protein Vasd; Type VI Secretion Protein VasD

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MPFALLLLSGCGSSDALPDLESQRLDLSVKASDKVNPDNQKKAAPIEIRVYELKNDAAFTTADYWSLHDNDKSVLTDDLV
RRDSFILRPGEEKKLRRPLNAQTTAIGVLAGYRNLAKSVWRVTYKIPEAPEKAWYSNFIPGKGKVQLDAELEQSAIVITE
RDK

Sequences:

>Translated_163_residues
MPFALLLLSGCGSSDALPDLESQRLDLSVKASDKVNPDNQKKAAPIEIRVYELKNDAAFTTADYWSLHDNDKSVLTDDLV
RRDSFILRPGEEKKLRRPLNAQTTAIGVLAGYRNLAKSVWRVTYKIPEAPEKAWYSNFIPGKGKVQLDAELEQSAIVITE
RDK
>Mature_162_residues
PFALLLLSGCGSSDALPDLESQRLDLSVKASDKVNPDNQKKAAPIEIRVYELKNDAAFTTADYWSLHDNDKSVLTDDLVR
RDSFILRPGEEKKLRRPLNAQTTAIGVLAGYRNLAKSVWRVTYKIPEAPEKAWYSNFIPGKGKVQLDAELEQSAIVITER
DK

Specific function: Unknown

COG id: COG3521

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18261; Mature: 18130

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFALLLLSGCGSSDALPDLESQRLDLSVKASDKVNPDNQKKAAPIEIRVYELKNDAAFT
CCEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
TADYWSLHDNDKSVLTDDLVRRDSFILRPGEEKKLRRPLNAQTTAIGVLAGYRNLAKSVW
EECEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RVTYKIPEAPEKAWYSNFIPGKGKVQLDAELEQSAIVITERDK
EEEEECCCCCCHHHHHCCCCCCCEEEECCCCCCEEEEEEECCC
>Mature Secondary Structure 
PFALLLLSGCGSSDALPDLESQRLDLSVKASDKVNPDNQKKAAPIEIRVYELKNDAAFT
CEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEEECCCCEEE
TADYWSLHDNDKSVLTDDLVRRDSFILRPGEEKKLRRPLNAQTTAIGVLAGYRNLAKSVW
EECEEEECCCCCHHHHHHHHHCCCEEECCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
RVTYKIPEAPEKAWYSNFIPGKGKVQLDAELEQSAIVITERDK
EEEEECCCCCCHHHHHCCCCCCCEEEECCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA