Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194735863
Identifier: 194735863
GI number: 194735863
Start: 332051
End: 334243
Strand: Direct
Name: 194735863
Synonym: SeSA_A0322
Alternate gene names: NA
Gene position: 332051-334243 (Clockwise)
Preceding gene: 194737681
Following gene: 194735948
Centisome position: 7.05
GC content: 55.95
Gene sequence:
>2193_bases ATGAGTTTTGTATCCACAAATAATAAATCCGGTATGGGGGGGCTGACGACAACCACGCCGCCGATAACAGGTGAAAACAG TGGAACTACAGCAGGTTCGGTTGCCGGAAGCGTGGCGGGAGCCGCAGAAGCGGCAGTGGAACAGGCGCTGGGATCTCTGA TGGGCGACCTGCCTGAACCGTCGGGGTTGGTGAAAGCAGCGGTGGCTGCGGCGGCACAGGCTGCGGCAGCGGCGGGCGCG GCGCAGGATGTGATATCGGCACTAATTTCTGGTGCAACCAGCGGGCCGGGCGCACATAACGTGACGGTCAGCGGCAGCGC AGTTCCACCGCAGATGCTGCTGTTTTCCAGTCTGAACGGCTCGGAAGCTCTCGGTAGCTTGTTTACCTACATCGTACAGC TAAAAACGCCCGACACCCTGAATCTGGGCTATGTCTCCCCCGCAGCCAACCTGCCGCTTAAAGCCATGGTGGGCAAAGAT TTGTGCGTCAACATCGAACTGGATGGCGGCGGCAAACGGCATATCAGCGGGCTGGTCACGGCGGCGCGGGTGGTGGGCCA TGAAGGGCGTTCTGTTACCTATGAGCTGCGTATGGAGCCGTGGGTAAAACTGCTGACCCACACCAGCGACTACAAGGCAT TCCAGAATAAAACCGTGGTGGACATTCTCGATGAAGTGCTGGCTGAGTATCCGTATCCGGTGGAAAAGCGACTGGTGGAA AGCTACCCGGTACGCACCTGGCAGGTACAGTACGGTGAAACTGATTTTGATTTTCTTCAGCGACTGATGCAGGAGTGGGG CATCTACTGGTGGTTTGAGCACAGCGAGGACAGCCACACGCTGGTGCTGGCGGATGCCATCAGTACACATCACGCCTGCC CGGATTCACCGGAGGTAGAATGGCATCAAAAAGGGTTAAAGCTGGATAAAGCATTTATCCACACCATTATAGCCAATGAA AGTCTGCGTACCGGGCAGTGGGTACTGGATGATTTTGACTTTAAAAAACCGCGCTCGCGGCTGGCGAACACAGTGGCAAA CCCGCGTGAAACCGGCCATGCCAGTTACGAACACTACGAATGGCCGGGCGATTATTTCGACAAGGGCGAAGGCGAAATGC TGACGCGCATTCGTATGGAAGCGCAGCGCAGCCCTGGCAGCCGGGTTCACGGTGCCGGGAATATCCGTACGCTGATGACT GGCTACACCTTTGCGTTGATGAATCACCCTACGGCAGAACTCAACCAGGAATATCTGTTGGCGCAGACTACGCTGTTTGT GCAGGACAACGCGCAGCACAGCGGGCAGGACCAGCACTTTACCTTTTCCACCCGTTTTGAACTGCACCCGACCCGTGAGG TGTTCCGCCCGCAGCGGACGGTGAGCAAACCCCACACCAAAGGGCCGCAGAGCGCCATCGTCACCGGCCCGGCGGGCCAG GAAATCTGGACGGATCAGTACGGGCGGGTAAAGGTGCAGTTTGGCTGGGACCGTTACGGCAAAATGGATGAAAACAGCTC CTGCTGGATACGCGTCAGCTACCCATGGGCGGGCAAAGGCTTCGGGATGATCCAGATCCCGCGTATCGGCCAGGAAGTGC TGGTGGATTTCAAAAACGGCGATCCGGATCTGCCGATCATCGTGGGGCGTACCTACAACCAGGACACCATGCCGCCGTGG GGACTGCCGGGAATGGCGTCGCAGAGCGGGATCTTCAGCCACTCGCTGTATGGCGGGCCAACGAACGGCAACATGCTGCG TTTTGACGACAAAACCGGCGCGGAGGAAGTGAAGTTCCACGCGGAAAAAGATCTCAACACCACGGTGAAGAATAATGAAA CGCATACGGTTATGGTGGATCGCACTAAAACCATTATTAAAAATGAAACCAACAGTATTGGTGAGGACAGAAACACCACG GTAACGAAGAATGACGGCCTTTCCGTAAAACTGGCGCAGACGATCAATATCGGCACCACTTATCGTTTAGATGTTGGCGA TCAATTCACGCTTCGCTGCGGCAATGCGGCGCTTGTTTTACATAAGGACGGCTCCATTGAGTTTTGTGGCAAGCAACTGA TGTTACATACCAGCGATGTCATGCAACTGATTGGTAAAGGTATTGATATGAACCCGGATGGCGGCACAGCCGTAACCGCC GATGATATTGCCCCCCTTCCCACCTCTGAATGA
Upstream 100 bases:
>100_bases AGCGCTTTTTTGTGCTTTTTAAAATATGTTTGTGCCAGTGGAATGTTATTTCCGACTGCCAAATACTGCGCTTAAATTTA GTATTAAAGGAGCAAATACC
Downstream 100 bases:
>100_bases TCTGAATTAAACCTGGAGTTCTCATGGATCGACCATACCGCATACAGGAAGGGTGTTTTGTCCTGCCTGAAACATTTACG GATCGCAGCGTTAATATTTT
Product: Rhs-family protein
Products: NA
Alternate protein names: Rhs Element Vgr Protein; Rhs-Family Protein; VgrG Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Replication/Virulence Associated Protein; Conserved Hypothethical Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; RHS Accessory Genetic Element; Vgr Family Type VI Secretion System
Number of amino acids: Translated: 730; Mature: 729
Protein sequence:
>730_residues MSFVSTNNKSGMGGLTTTTPPITGENSGTTAGSVAGSVAGAAEAAVEQALGSLMGDLPEPSGLVKAAVAAAAQAAAAAGA AQDVISALISGATSGPGAHNVTVSGSAVPPQMLLFSSLNGSEALGSLFTYIVQLKTPDTLNLGYVSPAANLPLKAMVGKD LCVNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVE SYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISTHHACPDSPEVEWHQKGLKLDKAFIHTIIANE SLRTGQWVLDDFDFKKPRSRLANTVANPRETGHASYEHYEWPGDYFDKGEGEMLTRIRMEAQRSPGSRVHGAGNIRTLMT GYTFALMNHPTAELNQEYLLAQTTLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQ EIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPW GLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTT VTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA DDIAPLPTSE
Sequences:
>Translated_730_residues MSFVSTNNKSGMGGLTTTTPPITGENSGTTAGSVAGSVAGAAEAAVEQALGSLMGDLPEPSGLVKAAVAAAAQAAAAAGA AQDVISALISGATSGPGAHNVTVSGSAVPPQMLLFSSLNGSEALGSLFTYIVQLKTPDTLNLGYVSPAANLPLKAMVGKD LCVNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVE SYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISTHHACPDSPEVEWHQKGLKLDKAFIHTIIANE SLRTGQWVLDDFDFKKPRSRLANTVANPRETGHASYEHYEWPGDYFDKGEGEMLTRIRMEAQRSPGSRVHGAGNIRTLMT GYTFALMNHPTAELNQEYLLAQTTLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQ EIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPW GLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTT VTKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA DDIAPLPTSE >Mature_729_residues SFVSTNNKSGMGGLTTTTPPITGENSGTTAGSVAGSVAGAAEAAVEQALGSLMGDLPEPSGLVKAAVAAAAQAAAAAGAA QDVISALISGATSGPGAHNVTVSGSAVPPQMLLFSSLNGSEALGSLFTYIVQLKTPDTLNLGYVSPAANLPLKAMVGKDL CVNIELDGGGKRHISGLVTAARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVES YPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISTHHACPDSPEVEWHQKGLKLDKAFIHTIIANES LRTGQWVLDDFDFKKPRSRLANTVANPRETGHASYEHYEWPGDYFDKGEGEMLTRIRMEAQRSPGSRVHGAGNIRTLMTG YTFALMNHPTAELNQEYLLAQTTLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQE IWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNGDPDLPIIVGRTYNQDTMPPWG LPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFHAEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTV TKNDGLSVKLAQTINIGTTYRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTAD DIAPLPTSE
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79681; Mature: 79550
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVSTNNKSGMGGLTTTTPPITGENSGTTAGSVAGSVAGAAEAAVEQALGSLMGDLPEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGLVKAAVAAAAQAAAAAGAAQDVISALISGATSGPGAHNVTVSGSAVPPQMLLFSSLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHEEECCCC SEALGSLFTYIVQLKTPDTLNLGYVSPAANLPLKAMVGKDLCVNIELDGGGKRHISGLVT HHHHHHHHHEEEEECCCCCCCCEEECCCCCCCCHHCCCCCEEEEEEECCCCCHHHHHHHH AARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVE HHHHHCCCCCEEEEEEECCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH SYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISTHHACPDSPEVE HCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEECHHHCCCCCCCCCCH WHQKGLKLDKAFIHTIIANESLRTGQWVLDDFDFKKPRSRLANTVANPRETGHASYEHYE HHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC WPGDYFDKGEGEMLTRIRMEAQRSPGSRVHGAGNIRTLMTGYTFALMNHPTAELNQEYLL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCEEEEEECCCHHHHCCCEEE AQTTLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQ EEEEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHCCCCCCCCCCCEEEECCCCC EIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNG CHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECCC DPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFH CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCHHHHEEE AEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTT CCCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCEE YRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA EEEECCCEEEEEECCEEEEEEECCCCEECCHHHEEEHHHHHHHHHCCCCCCCCCCCEEEC DDIAPLPTSE CCCCCCCCCC >Mature Secondary Structure SFVSTNNKSGMGGLTTTTPPITGENSGTTAGSVAGSVAGAAEAAVEQALGSLMGDLPEP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC SGLVKAAVAAAAQAAAAAGAAQDVISALISGATSGPGAHNVTVSGSAVPPQMLLFSSLNG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHHHHEEECCCC SEALGSLFTYIVQLKTPDTLNLGYVSPAANLPLKAMVGKDLCVNIELDGGGKRHISGLVT HHHHHHHHHEEEEECCCCCCCCEEECCCCCCCCHHCCCCCEEEEEEECCCCCHHHHHHHH AARVVGHEGRSVTYELRMEPWVKLLTHTSDYKAFQNKTVVDILDEVLAEYPYPVEKRLVE HHHHHCCCCCEEEEEEECCHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHH SYPVRTWQVQYGETDFDFLQRLMQEWGIYWWFEHSEDSHTLVLADAISTHHACPDSPEVE HCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEECCCCCCEEEEEECHHHCCCCCCCCCCH WHQKGLKLDKAFIHTIIANESLRTGQWVLDDFDFKKPRSRLANTVANPRETGHASYEHYE HHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCC WPGDYFDKGEGEMLTRIRMEAQRSPGSRVHGAGNIRTLMTGYTFALMNHPTAELNQEYLL CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCEEEEEECCCHHHHCCCEEE AQTTLFVQDNAQHSGQDQHFTFSTRFELHPTREVFRPQRTVSKPHTKGPQSAIVTGPAGQ EEEEEEEECCCCCCCCCCEEEEEEEEEECCCHHHHCCHHHCCCCCCCCCCCEEEECCCCC EIWTDQYGRVKVQFGWDRYGKMDENSSCWIRVSYPWAGKGFGMIQIPRIGQEVLVDFKNG CHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCEEEEEECCC DPDLPIIVGRTYNQDTMPPWGLPGMASQSGIFSHSLYGGPTNGNMLRFDDKTGAEEVKFH CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEECCCCCHHHHEEE AEKDLNTTVKNNETHTVMVDRTKTIIKNETNSIGEDRNTTVTKNDGLSVKLAQTINIGTT CCCCCCCCCCCCCEEEEEEECCHHHHHCCCCCCCCCCCCEEECCCCCEEEEEEEEECCEE YRLDVGDQFTLRCGNAALVLHKDGSIEFCGKQLMLHTSDVMQLIGKGIDMNPDGGTAVTA EEEECCCEEEEEECCEEEEEEECCCCEECCHHHEEEHHHHHHHHHCCCCCCCCCCCEEEC DDIAPLPTSE CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA