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The map label for this gene is pduB [H]

Identifier: 194735756

GI number: 194735756

Start: 2096656

End: 2097468

Strand: Direct

Name: pduB [H]

Synonym: SeSA_A2209

Alternate gene names: 194735756

Gene position: 2096656-2097468 (Clockwise)

Preceding gene: 194736143

Following gene: 194735085

Centisome position: 44.52

GC content: 60.02

Gene sequence:

>813_bases
ATGAGCAGCAATGAGCTGGTGGAACAGATCATGGCGCAGGTGATTGCCCGTGTGGCAACGCCGGAACAACAGGCCATCCC
TGGTCAACCCCAACCTATACGAGAGACGGCTATGGCAGAAAAAAGCTGCAGTTTAACGGAATTTGTCGGGACCGCCATTG
GCGATACCCTTGGCCTGGTTATCGCTAACGTCGATACCGCCCTGCTGGATGCGATGAAGCTTGAGAAGCGCTATCGCTCC
ATCGGCATTCTCGGCGCCCGCATCGGCGCAGGCCCGCACATTATGGCGGCGGACGAAGCGGTGAAAGCCACCAATACCGA
AGTAGTCAGCATTGAGCTGCCGCGCGATACCAAAGGCGGCGCGGGCCACGGTTCGCTGATTATTTTAGGCGGCAACGACG
TTTCCGACGTCAAGCGCGGTATCGAAGTCGCGCTGAAAGAGCTGGACCGTACCTTCGGTGATGTTTACGGCAACGAAGCC
GGGCATATCGAGCTGCAGTACACCGCTCGCGCCAGCTACGCGCTGGAAAAAGCGTTCGGCGCGCCGATTGGCCGTGCCTG
CGGCGTCATTGTCGGCGCTCCGGCTTCCGTCGGCGTACTGATGGCCGATACCGCCCTGAAGTCAGCCAACGTTGAAGTCG
TGGCGTACAGCTCTCCGGCGCACGGCACCAGCTTTAGTAACGAAGCCATTCTGGTGATTTCCGGCGACTCCGGCGCGGTC
CGTCAGGCGGTGACCTCCGCCCGCGAAATCGGCAAAACCGTCCTTGCGACCCTCGGTTCTGAACCGAAAAACGATCGCCC
GTCCTACATCTGA

Upstream 100 bases:

>100_bases
GTGCCGCAGCCGCACGCAACGTGGGTGAAGTGAAAGCCGTACACGTCATCCCACGCCCTCACACCGATGTAGAAAAAATC
TTACCGAAGGGAATTAGCCA

Downstream 100 bases:

>100_bases
TACCCACGAGGCTGATTCATGAGATCGAAAAGATTTGAAGCACTGGCGAAACGCCCTGTGAATCAGGACGGCTTCGTTAA
GGAGTGGATCGAAGAAGGCT

Product: propanediol utilization protein PduB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRS
IGILGARIGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEA
GHIELQYTARASYALEKAFGAPIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAV
RQAVTSAREIGKTVLATLGSEPKNDRPSYI

Sequences:

>Translated_270_residues
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRS
IGILGARIGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEA
GHIELQYTARASYALEKAFGAPIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAV
RQAVTSAREIGKTVLATLGSEPKNDRPSYI
>Mature_269_residues
SSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLVIANVDTALLDAMKLEKRYRSI
GILGARIGAGPHIMAADEAVKATNTEVVSIELPRDTKGGAGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAG
HIELQYTARASYALEKAFGAPIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAVR
QAVTSAREIGKTVLATLGSEPKNDRPSYI

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4816

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutL/PduB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009193
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 28014; Mature: 27883

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLV
CCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IANVDTALLDAMKLEKRYRSIGILGARIGAGPHIMAADEAVKATNTEVVSIELPRDTKGG
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCHHHHCCCCEEEEEECCCCCCCC
AGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFG
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHC
APIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAV
CCHHHHCCEEEECCCCCCEEEEHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHH
RQAVTSAREIGKTVLATLGSEPKNDRPSYI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
SSNELVEQIMAQVIARVATPEQQAIPGQPQPIRETAMAEKSCSLTEFVGTAIGDTLGLV
CHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHH
IANVDTALLDAMKLEKRYRSIGILGARIGAGPHIMAADEAVKATNTEVVSIELPRDTKGG
HHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCEEECCHHHHCCCCEEEEEECCCCCCCC
AGHGSLIILGGNDVSDVKRGIEVALKELDRTFGDVYGNEAGHIELQYTARASYALEKAFG
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHC
APIGRACGVIVGAPASVGVLMADTALKSANVEVVAYSSPAHGTSFSNEAILVISGDSGAV
CCHHHHCCEEEECCCCCCEEEEHHHHCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCHH
RQAVTSAREIGKTVLATLGSEPKNDRPSYI
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8071226; 9352910; 11677609 [H]