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The map label for this gene is rimP [H]

Identifier: 194735644

GI number: 194735644

Start: 3358259

End: 3358711

Strand: Reverse

Name: rimP [H]

Synonym: SeSA_A3478

Alternate gene names: 194735644

Gene position: 3358711-3358259 (Counterclockwise)

Preceding gene: 194734665

Following gene: 194733934

Centisome position: 71.32

GC content: 50.33

Gene sequence:

>453_bases
TTGTCCACATTAGAGCAAAAATTAACAGAGATGATTACAGCGCCAGTTGAAGCCTTAGGCTACGAGCTGGTCGGCATCGA
ATTTATTCGCGGTCGCACATCCACACTGCGCATCTATATTGATAGTGAAGATGGCATCAATGTTGATGATTGTGCTGATG
TGAGCCACCAGGTAAGCGCGGTGCTGGACGTTGAAGATCCTATCTCCGTGGCTTACAACCTTGAAGTCTCGTCACCGGGT
CTCGACCGTCCTATGTTCACTGCCGATCACTATGCGCGTTTCCAGGGTGAAGAAGTCGCGCTGGTTCTTCGCATGGCGGT
ACAGAACCGTCGCAAGTGGCAGGGCATTATCAAAGCGGTGGACGGTGAAATGATTACCGTCACAGTCGAAGGCAAAGATG
AAGTGTTCGCGCTGAGTAATATCCAGAAGGCGAACCTGGTTCCCCACTTTTAA

Upstream 100 bases:

>100_bases
AGGGTTCAGTTATCTAAAGCCCCGATTTATCGGGGTTTTTTGTTATCTGACTACAGAATAACTGGGCTTTAGGCCCTTTT
TTTATGTCTTGGGGGTGGGC

Downstream 100 bases:

>100_bases
CAGTCTGGATGAGGTGAAAAGCCCGCGATGAACAAAGAAATTTTGGCTGTTGTTGAAGCCGTCTCCAACGAAAAAGCGCT
GCCACGCGAAAAAATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPG
LDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF

Sequences:

>Translated_150_residues
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPG
LDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF
>Mature_149_residues
STLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSAVLDVEDPISVAYNLEVSSPGL
DRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAVDGEMITVTVEGKDEVFALSNIQKANLVPHF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=150, Percent_Identity=95.3333333333333, Blast_Score=298, Evalue=7e-83,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 16670; Mature: 16539

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSA
CCHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHCHHHHHEE
VLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAV
EECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHC
DGEMITVTVEGKDEVFALSNIQKANLVPHF
CCCEEEEEECCCCCEEEECCCCCCCCCCCC
>Mature Secondary Structure 
STLEQKLTEMITAPVEALGYELVGIEFIRGRTSTLRIYIDSEDGINVDDCADVSHQVSA
CHHHHHHHHHHHHHHHHHCEEEEEEEEECCCCEEEEEEEECCCCCCHHHHHCHHHHHEE
VLDVEDPISVAYNLEVSSPGLDRPMFTADHYARFQGEEVALVLRMAVQNRRKWQGIIKAV
EECCCCCCEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHC
DGEMITVTVEGKDEVFALSNIQKANLVPHF
CCCEEEEEECCCCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA