Click here to switch to the map view.

The map label for this gene is hnr [H]

Identifier: 194735294

GI number: 194735294

Start: 1826325

End: 1827338

Strand: Reverse

Name: hnr [H]

Synonym: SeSA_A1886

Alternate gene names: 194735294

Gene position: 1827338-1826325 (Counterclockwise)

Preceding gene: 194736874

Following gene: 194735711

Centisome position: 38.8

GC content: 50.89

Gene sequence:

>1014_bases
ATGACGCAGCCATTGGTCGGAAAACAGATTCTTATTGTTGAAGACGAGCCTGTATTTCGCTCGCTTCTGGATTCGTGGTT
TTCCTCTTTGGGAGCGACAACGGCATTGGCAGGCGACGGGGTGGATGCCCTGGAGTTGATGGGGCGTTTTACCCCTGATC
TCATGATATGTGATATCGCTATGCCGAGAATGAACGGTCTCAAACTGGTAGAAAACTTACGTAATCGCGGAGACCAGACG
CCTATTCTGGTTATTTCCGCAACAGAAAATATGGCGGATATCGCCAAAGCGTTACGCCTTGGGGTTGAAGATGTCTTGCT
GAAGCCGGTAAAAGATCTCAACCGCTTGCGGGAAACCGTATTCGCTTGCTTATACCCTAATATGTTTAACTCGCGGGTTG
AAGAAGAAGAACGCCTGTTTCGTGACTGGGATGCAATGGTGAGTAATCCGACCGCCGCAGCGCAATTGTTGCAGGAATTG
CAGCCCCCGGTACAGCAGGTGATTTCTCATTGCCGCATTAATTACCGGCAGCTCGTCTCCGCCGATCAGCCTGGACTGGT
GCTGGATATTGCGCCGCTATCTGATAACGAACTGGCATTTTATTGCCTGGATGTCACCCGGGCGGGCGATAACGGCGTGT
TAGCCGCATTGTTGCTGCGAGCGCTATTTAACGGCTTATTGCAGGATCAGCTCGGCCAACAAAAGCACCGTTTACCGGAG
TTAGGCGCGCTATTAAAACAGGTAAATCATCTGCTCAGACAAGCCAATTTACCTGGGCAATTCCCGCTATTTGTCGGCTA
CTATCACAGTGAGCTCAAAAATTTGATTCTCGTCTCCGCCGGATTGAACGCCACCTTAAATACGGGCGCTCATCAGGTTC
AAATTAGCAGCGGCGTGCCGCTAGGAACATTGGGTAACGCCTACCTTAACCAATTAAGCCAGCGTTGCGACTCATGGCAG
TGTCAAATATGGGGCGCAGGAGGGCGTCTGCGATTGATGTTGTCTGCGGAATGA

Upstream 100 bases:

>100_bases
CGACGTTTAATGTACCTTTTACGATCACTTAAGCAAATTCTGACAGGCGCAAGCGGCAATACCATGCCACTATTGATTAA
AGCCAGTCAGGGGAGAGAAC

Downstream 100 bases:

>100_bases
CCAAACGGAAGAGTGAGCGGAAATTGCTTTACCTGCCTTTCCCGACGAGTGTTACTATCTGCGGCAGATTTATAAGTATT
TGTCTTAATTATACCAATAT

Product: response regulator of RpoS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 336

Protein sequence:

>337_residues
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQT
PILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQEL
QPPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPE
LGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVPLGTLGNAYLNQLSQRCDSWQ
CQIWGAGGRLRLMLSAE

Sequences:

>Translated_337_residues
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQT
PILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQEL
QPPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPE
LGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVPLGTLGNAYLNQLSQRCDSWQ
CQIWGAGGRLRLMLSAE
>Mature_336_residues
TQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIAMPRMNGLKLVENLRNRGDQTP
ILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETVFACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQELQ
PPVQQVISHCRINYRQLVSADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPEL
GALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVPLGTLGNAYLNQLSQRCDSWQC
QIWGAGGRLRLMLSAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1787487, Length=337, Percent_Identity=90.5044510385757, Blast_Score=609, Evalue=1e-176,
Organism=Escherichia coli, GI1788550, Length=108, Percent_Identity=36.1111111111111, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI145693157, Length=111, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1787229, Length=112, Percent_Identity=36.6071428571429, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 37209; Mature: 37077

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIA
CCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCEEEEEEC
MPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETV
CCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
FACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQELQPPVQQVISHCRINYRQLVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHC
ADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPE
CCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEECCCCEEEEECCCCC
LGTLGNAYLNQLSQRCDSWQCQIWGAGGRLRLMLSAE
CCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECC
>Mature Secondary Structure 
TQPLVGKQILIVEDEPVFRSLLDSWFSSLGATTALAGDGVDALELMGRFTPDLMICDIA
CCCCCCCEEEEECCCHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCCEEEEEEC
MPRMNGLKLVENLRNRGDQTPILVISATENMADIAKALRLGVEDVLLKPVKDLNRLRETV
CCCCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
FACLYPNMFNSRVEEEERLFRDWDAMVSNPTAAAQLLQELQPPVQQVISHCRINYRQLVS
HHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHHHCCCHHHHHC
ADQPGLVLDIAPLSDNELAFYCLDVTRAGDNGVLAALLLRALFNGLLQDQLGQQKHRLPE
CCCCCEEEEEECCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
LGALLKQVNHLLRQANLPGQFPLFVGYYHSELKNLILVSAGLNATLNTGAHQVQISSGVP
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHEEEEECCCCCEECCCCEEEEECCCCC
LGTLGNAYLNQLSQRCDSWQCQIWGAGGRLRLMLSAE
CCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]