Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is yidJ [C]
Identifier: 194735205
GI number: 194735205
Start: 95959
End: 97848
Strand: Direct
Name: yidJ [C]
Synonym: SeSA_A0094
Alternate gene names: 194735205
Gene position: 95959-97848 (Clockwise)
Preceding gene: 194736735
Following gene: 194735745
Centisome position: 2.04
GC content: 46.88
Gene sequence:
>1890_bases ATGAGTAATAAAAAAAATCTGTCCGCAGAAGAGACGGATCTTACGCGTAGGAAACTGTTAACCAGCGCCGGTATTCTTGC CGCCGGCGGTATGCTATCCGGCGCGGTAAAGGCTGATGAAAAATGCGCCGTCAAGGCGAAACCGGCGTGGGATAAACCGT TTACCGGCGAAATCCCGGAAAAATTGCCAGAAGGATATAATATTCTGTTAGTCGTGACCGACCAGGAGCGTTTTTTTCCT ACGTTTCCTTTCCCGGTACCCGGCAGAGAGCGGCTCATGAAAACGGGGGTGACATTCTGTAATCATCAGAATACCAGTAA TGTCTGCACGCCTTCCCGCTCCGTATTGTATACCGGCTTACATATGCCCCAGACAAAGATGTTTGATAATCTGGGATTGC CCTGGATGCCTTATGACCTTGACCCCGCTCTTGGAACCACAGGCCATATGATGCGGGAACTGGGATACTATACGGCCTAT AAAGGTAAGTGGCATCTTACAGAAAAACTGGAGAAGCCTTTGCCTGACGAAAAAGATGAGGATATTGATGTCGGGGATAT TCCTGAACCAGAATTACATAAAATTATGGAAAAATATGGTTTTGCTGACTATCACGGCATCGGCGATATTATTGGCCATA GTAAAGGCGGCTATTTTTATGATTCAACCACCACGGCTCAGACTATAAATTGGTTAAGATGCAAGGGGCAGCCCTTGAAT GACCAACACAAGCCCTGGTTCCTGGCCGTTAACCTCGTTAATCCTCATGACGTCATGTTTATTGATACCGATAAAGAGGG AGAAAAGGTACAGTGGCGTGGCGAGTTGGATCAGGATGATAATACCCTGGCGCCCACGCAGCCGCCGGAAAACGAGCTTT ATCAGGCAAGCTGGCCGAACTATCCGCTGCCGGCAAACAGGCATCAATCATTCAATGAGCAGGGAAGACCGCCGGCGCAT CTTGAATACCAGACGGCGCGCGCTGCGCTGGAAGGGCAGTTTCCTGATGAAGATCGTCGTTGGCGTAAACTGCTTGACTA CTATTTCAACTGTATCCGCGATTGTGATACTCACCTTGACCGGATATTAAATGAACTTGATGCCCTCAAGTTAACTGATA AAACGATTGTTGTATTTACTGCAGATCATGGCGAATTAGGCGGAAGCCATCAGATGCACGGTAAAGGCGCTTCCGTTTAT AAAGAACAGATCCATGTACCGATGATTATTTCCCACCCGGCGTACCCCGGTAATAAGAAATGTCAGGCGTTGACCTGTCA TCTTGATATTGCGCCGACATTAGTTGGGCTGACCGGTTTGCCGGAAGAAAAACAGCACCAGGCGTTAGGCAACCGCAAAG GCGTTAATTTTAGCGGATTGCTAAAAAACCCGGAGGGTGTTGCGGTTAATGCGGTGAGAAATGCCAGCTTATATTGCTAT GGCATGATCTTGTATACCGATGCCCATTATCTCCACCGCGTTATCGCGCTACAAAGAGATAAACAAAAAACGGTGGCGCA AATCAAGCAGGAAATATCCCATTTGCATCCTGATTTCAGCCATCGTTCAGGGACGCGGATGATTAACGATGGTCGTTATA AGTTTGCGCGTTATTTCTCGCTAAGGGAGCATAATACGCCGGAAACCTGGGAGGATCTTATTAAGTACAACGATCTTGAA CTTTACGATCTTAAAAATGATCCCGATGAGAACCATAACCTTGCTGCTGATAAACAGAAATATCAGGATCTCATACTTAC GATGAATGAAAAACTGAATAAAATTATCAAAGACGAAATTGGCGTGGATGACGGCAGTTTTATGCCGGATGCGGCCCGTG AGCCGTGGGATCTTACTATTGAGCAGTTTAACCGCATGGCGAAAGATTAA
Upstream 100 bases:
>100_bases AACACATATTCTTACCCGGAAGGCATTGATACATATCCACGCTTCCTCGTACAGTAATAAATGAATATGTGATAAAGTTA CTGACTACAGGTATAATAAT
Downstream 100 bases:
>100_bases GAGCCTGGCCCATTAGGCTATTTTATTCGCCATTTTGGGACCGGGCAGTGCTCAAAATCCTCACGTACTACGTGTACGCT CCGGTTTCTGCGCGCTGGTC
Product: sulfatase
Products: NA
Alternate protein names: Sulfatase Family Protein; Arylsulfatase A; Mucin-Desulfating Sulfatase; N-Acetylglucosamine-6-Sulfatase; Hydrolase; Arylsulfatase; Type I Phosphodiesterase/Nucleotide Pyrophosphatase Family; Twin-Arginine Translocation Pathway Signal; Arylsulfatase A Family Protein; Sulfatase/Phosphatase; Phosphonate Monoester Hydrolase; Iduronate-2-Sulfatase; Phosphatase/Sulfatase; Arylsulfatase A Like Protein
Number of amino acids: Translated: 629; Mature: 628
Protein sequence:
>629_residues MSNKKNLSAEETDLTRRKLLTSAGILAAGGMLSGAVKADEKCAVKAKPAWDKPFTGEIPEKLPEGYNILLVVTDQERFFP TFPFPVPGRERLMKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAY KGKWHLTEKLEKPLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLN DQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAH LEYQTARAALEGQFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVY KEQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPEGVAVNAVRNASLYCY GMILYTDAHYLHRVIALQRDKQKTVAQIKQEISHLHPDFSHRSGTRMINDGRYKFARYFSLREHNTPETWEDLIKYNDLE LYDLKNDPDENHNLAADKQKYQDLILTMNEKLNKIIKDEIGVDDGSFMPDAAREPWDLTIEQFNRMAKD
Sequences:
>Translated_629_residues MSNKKNLSAEETDLTRRKLLTSAGILAAGGMLSGAVKADEKCAVKAKPAWDKPFTGEIPEKLPEGYNILLVVTDQERFFP TFPFPVPGRERLMKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAY KGKWHLTEKLEKPLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLN DQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAH LEYQTARAALEGQFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVY KEQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPEGVAVNAVRNASLYCY GMILYTDAHYLHRVIALQRDKQKTVAQIKQEISHLHPDFSHRSGTRMINDGRYKFARYFSLREHNTPETWEDLIKYNDLE LYDLKNDPDENHNLAADKQKYQDLILTMNEKLNKIIKDEIGVDDGSFMPDAAREPWDLTIEQFNRMAKD >Mature_628_residues SNKKNLSAEETDLTRRKLLTSAGILAAGGMLSGAVKADEKCAVKAKPAWDKPFTGEIPEKLPEGYNILLVVTDQERFFPT FPFPVPGRERLMKTGVTFCNHQNTSNVCTPSRSVLYTGLHMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYK GKWHLTEKLEKPLPDEKDEDIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLND QHKPWFLAVNLVNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPNYPLPANRHQSFNEQGRPPAHL EYQTARAALEGQFPDEDRRWRKLLDYYFNCIRDCDTHLDRILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYK EQIHVPMIISHPAYPGNKKCQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPEGVAVNAVRNASLYCYG MILYTDAHYLHRVIALQRDKQKTVAQIKQEISHLHPDFSHRSGTRMINDGRYKFARYFSLREHNTPETWEDLIKYNDLEL YDLKNDPDENHNLAADKQKYQDLILTMNEKLNKIIKDEIGVDDGSFMPDAAREPWDLTIEQFNRMAKD
Specific function: Unknown
COG id: COG3119
COG function: function code P; Arylsulfatase A and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.6.- [C]
Molecular weight: Translated: 71737; Mature: 71606
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKKNLSAEETDLTRRKLLTSAGILAAGGMLSGAVKADEKCAVKAKPAWDKPFTGEIPE CCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCEEEECCCCCCCCCCCCCHH KLPEGYNILLVVTDQERFFPTFPFPVPGRERLMKTGVTFCNHQNTSNVCTPSRSVLYTGL HCCCCCEEEEEEECCHHCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCEEEECC HMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYKGKWHLTEKLEKPLPDEKDE CCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCEEEHHHHHCCCCCCCCC DIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLN CCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHCCCCCCEEECCCCHHHHHHEEEECCCCCC DQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPN CCCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCC YPLPANRHQSFNEQGRPPAHLEYQTARAALEGQFPDEDRRWRKLLDYYFNCIRDCDTHLD CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYKEQIHVPMIISHPAYPGNKK HHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCC CQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPEGVAVNAVRNASLYCY CEEEEEEEECHHHHHCCCCCCCHHHHHHHCCCCCCCHHHEECCCCCEEEEEEECCCEEEE GMILYTDAHYLHRVIALQRDKQKTVAQIKQEISHLHPDFSHRSGTRMINDGRYKFARYFS EEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEHHHHH LREHNTPETWEDLIKYNDLELYDLKNDPDENHNLAADKQKYQDLILTMNEKLNKIIKDEI HHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GVDDGSFMPDAAREPWDLTIEQFNRMAKD CCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SNKKNLSAEETDLTRRKLLTSAGILAAGGMLSGAVKADEKCAVKAKPAWDKPFTGEIPE CCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHCCCCCCCCEEEECCCCCCCCCCCCCHH KLPEGYNILLVVTDQERFFPTFPFPVPGRERLMKTGVTFCNHQNTSNVCTPSRSVLYTGL HCCCCCEEEEEEECCHHCCCCCCCCCCCHHHHHHHCCHHCCCCCCCCCCCCCCCEEEECC HMPQTKMFDNLGLPWMPYDLDPALGTTGHMMRELGYYTAYKGKWHLTEKLEKPLPDEKDE CCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEECCCEEEHHHHHCCCCCCCCC DIDVGDIPEPELHKIMEKYGFADYHGIGDIIGHSKGGYFYDSTTTAQTINWLRCKGQPLN CCCCCCCCCHHHHHHHHHCCCCHHCCCHHHHCCCCCCEEECCCCHHHHHHEEEECCCCCC DQHKPWFLAVNLVNPHDVMFIDTDKEGEKVQWRGELDQDDNTLAPTQPPENELYQASWPN CCCCCEEEEEEEECCCEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEECCCCC YPLPANRHQSFNEQGRPPAHLEYQTARAALEGQFPDEDRRWRKLLDYYFNCIRDCDTHLD CCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RILNELDALKLTDKTIVVFTADHGELGGSHQMHGKGASVYKEQIHVPMIISHPAYPGNKK HHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCC CQALTCHLDIAPTLVGLTGLPEEKQHQALGNRKGVNFSGLLKNPEGVAVNAVRNASLYCY CEEEEEEEECHHHHHCCCCCCCHHHHHHHCCCCCCCHHHEECCCCCEEEEEEECCCEEEE GMILYTDAHYLHRVIALQRDKQKTVAQIKQEISHLHPDFSHRSGTRMINDGRYKFARYFS EEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCEEEHHHHH LREHNTPETWEDLIKYNDLELYDLKNDPDENHNLAADKQKYQDLILTMNEKLNKIIKDEI HHCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC GVDDGSFMPDAAREPWDLTIEQFNRMAKD CCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA