Click here to switch to the map view.

The map label for this gene is fhuD [H]

Identifier: 194735158

GI number: 194735158

Start: 233406

End: 234296

Strand: Direct

Name: fhuD [H]

Synonym: SeSA_A0222

Alternate gene names: 194735158

Gene position: 233406-234296 (Clockwise)

Preceding gene: 194735854

Following gene: 194734815

Centisome position: 4.96

GC content: 58.92

Gene sequence:

>891_bases
ATGCGTGATTTATATCCTCTTACTCGCCGCCGTTTATTAACGGCGATGGCGCTCTCGCCGCTGCTTTGGCAAATGAATAC
GGCGCAGGCTGCCGCTATCGATCCCCGCCGGATTGTGGCGCTGGAGTGGCTGCCGGTTGAGCTGCTGCTGGCGCTCGGTA
TTACGCCGTATGGCGTGGCGGATGTGCCAAATTATAAGCTGTGGGTTAGCGAACCGCCGTTGCCGGATTCGGTGATTGAT
GTGGGTCTTCGCACTGAACCCAATCTCGAACTACTGACGGAGATGAAGCCGTCGTTTATGGTCTGGTCGGCAGGGTACGG
ACCCTCGCCGGAGAAACTGGCGCGGATCGCGCCGGGGCGCGGGTTCGATTTTAGTGACGGCAAAAAGCCGCTGGCGGTGG
CCCGACGCTCGCTGGTTGAACTGGCGCAGACGCTGAATCTGGAAGCTGCGGCAGAAAAACATCTGGCGCAATACGATCGC
TTCATCGCCAGTCAGAAGCCGCATTTTATCCGCCGCGGGGGGCGTCCGTTACTGATGACGACGCTTATCGATCCGCGGCA
TATGCTGGTGCTCGGCCCGAATTGCCTGTTCCAGGAGGTGCTGGACGAGTATGGCATTGTCAATGCCTGGCAGGGTGAAA
CCAACTTTTGGGGCAGTACGGCGGTCAGCATCGATCGGCTGGCGATGTATAAAGAAGCGGATGTGATCTGCTTCGATCAC
GGGAATAGCACCGATATGAACGCGCTGATGGCAACGCCGCTGTGGCAGGCCATGCCGTTTGTCCGCGCCGGGCGCTTTCA
CCGGGTGCCCGCCGTTTGGTTCTATGGCGCGACCCTCTCCACGATGCATTTTGTCCGCATCCTGAATAACGTGTTGGGAG
GCAAAGCGTGA

Upstream 100 bases:

>100_bases
CGGAACTGATGCGCAGTGACACGCTGGAGCAGATTTACGGTATCCCGATGGGTATCCTTCCGCATCCAGCGGGCGCGGCA
CCTGTGAGTTTTGTGTATTA

Downstream 100 bases:

>100_bases
GCAGAAAACGTGAAATGCCGGATGGCGGCGCGAAAAACGCCTTATCCGACCTACGGTTCGGGTGCTTTGTAGGCCGGATA
AGGCGAAGCCGCCATCCGGC

Product: iron-hydroxamate transporter substrate-binding subunit

Products: ADP; phosphate; iron (III) hydroxamate [Cytoplasm] [C]

Alternate protein names: Ferric hydroxamate uptake protein D; Ferrichrome-binding periplasmic protein; Iron(III)-hydroxamate-binding protein fhuD [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRDLYPLTRRRLLTAMALSPLLWQMNTAQAAAIDPRRIVALEWLPVELLLALGITPYGVADVPNYKLWVSEPPLPDSVID
VGLRTEPNLELLTEMKPSFMVWSAGYGPSPEKLARIAPGRGFDFSDGKKPLAVARRSLVELAQTLNLEAAAEKHLAQYDR
FIASQKPHFIRRGGRPLLMTTLIDPRHMLVLGPNCLFQEVLDEYGIVNAWQGETNFWGSTAVSIDRLAMYKEADVICFDH
GNSTDMNALMATPLWQAMPFVRAGRFHRVPAVWFYGATLSTMHFVRILNNVLGGKA

Sequences:

>Translated_296_residues
MRDLYPLTRRRLLTAMALSPLLWQMNTAQAAAIDPRRIVALEWLPVELLLALGITPYGVADVPNYKLWVSEPPLPDSVID
VGLRTEPNLELLTEMKPSFMVWSAGYGPSPEKLARIAPGRGFDFSDGKKPLAVARRSLVELAQTLNLEAAAEKHLAQYDR
FIASQKPHFIRRGGRPLLMTTLIDPRHMLVLGPNCLFQEVLDEYGIVNAWQGETNFWGSTAVSIDRLAMYKEADVICFDH
GNSTDMNALMATPLWQAMPFVRAGRFHRVPAVWFYGATLSTMHFVRILNNVLGGKA
>Mature_296_residues
MRDLYPLTRRRLLTAMALSPLLWQMNTAQAAAIDPRRIVALEWLPVELLLALGITPYGVADVPNYKLWVSEPPLPDSVID
VGLRTEPNLELLTEMKPSFMVWSAGYGPSPEKLARIAPGRGFDFSDGKKPLAVARRSLVELAQTLNLEAAAEKHLAQYDR
FIASQKPHFIRRGGRPLLMTTLIDPRHMLVLGPNCLFQEVLDEYGIVNAWQGETNFWGSTAVSIDRLAMYKEADVICFDH
GNSTDMNALMATPLWQAMPFVRAGRFHRVPAVWFYGATLSTMHFVRILNNVLGGKA

Specific function: Part of the ABC transporter complex fhuCDB involved in iron(3+)-hydroxamate import. Binds the iron(3+)-hydroxamate complex and transfers it to the membrane-bound permease. Required for the transport of all iron(3+)-hydroxamate siderophores such as ferrich

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786346, Length=296, Percent_Identity=83.1081081081081, Blast_Score=514, Evalue=1e-147,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008091
- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 33142; Mature: 33142

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: PS50983 FE_B12_PBP ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLYPLTRRRLLTAMALSPLLWQMNTAQAAAIDPRRIVALEWLPVELLLALGITPYGVA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHHHHCCCCCCCC
DVPNYKLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEKLARIAPGR
CCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCC
GFDFSDGKKPLAVARRSLVELAQTLNLEAAAEKHLAQYDRFIASQKPHFIRRGGRPLLMT
CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEE
TLIDPRHMLVLGPNCLFQEVLDEYGIVNAWQGETNFWGSTAVSIDRLAMYKEADVICFDH
EECCCCEEEEECCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC
GNSTDMNALMATPLWQAMPFVRAGRFHRVPAVWFYGATLSTMHFVRILNNVLGGKA
CCCCCCHHHHHCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRDLYPLTRRRLLTAMALSPLLWQMNTAQAAAIDPRRIVALEWLPVELLLALGITPYGVA
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEECHHHHHHHHHCCCCCCCC
DVPNYKLWVSEPPLPDSVIDVGLRTEPNLELLTEMKPSFMVWSAGYGPSPEKLARIAPGR
CCCCEEEEECCCCCCHHHHHCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCC
GFDFSDGKKPLAVARRSLVELAQTLNLEAAAEKHLAQYDRFIASQKPHFIRRGGRPLLMT
CCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCEEEE
TLIDPRHMLVLGPNCLFQEVLDEYGIVNAWQGETNFWGSTAVSIDRLAMYKEADVICFDH
EECCCCEEEEECCHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEC
GNSTDMNALMATPLWQAMPFVRAGRFHRVPAVWFYGATLSTMHFVRILNNVLGGKA
CCCCCCHHHHHCHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron (III) hydroxamate [Periplasm]; H2O [C]

Specific reaction: ATP + iron (III) hydroxamate [Periplasm] + H2O = ADP + phosphate + iron (III) hydroxamate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3301821; 2823072; 8202364; 9278503; 7651325; 10742172 [H]