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The map label for this gene is napC [H]

Identifier: 194735056

GI number: 194735056

Start: 2359461

End: 2360063

Strand: Reverse

Name: napC [H]

Synonym: SeSA_A2481

Alternate gene names: 194735056

Gene position: 2360063-2359461 (Counterclockwise)

Preceding gene: 194736854

Following gene: 194734093

Centisome position: 50.12

GC content: 51.58

Gene sequence:

>603_bases
ATGGAAAATTCTAACCGTAAACCCGGCTGGATAAAGCGCGTCTGGCGATGGTGGCGCAGCCCCAGCCGCCTGGCGTTGGG
GACGCTGCTGTTAATCGGTTTTATCGGCGGCATCATCTTCTGGGGCGGCTTCAATACCGGAATGGAAAAGGCTAACACCG
AAGAGTTTTGTATTAGCTGCCATGAAATGCGCAACACGGTGTATGAGGAGTATATGGAAACCGTCCACTACAACAACCGT
AGCGGCGTTCGTGCCACCTGTCCTGACTGCCATGTGCCGCATGAGTGGGGGCCGAAGATGATCCGTAAGATCAAAGCCAG
TAAAGAGCTGTATGCGAAGGTATTTGGGCTGATAGATACACCGCAGAAATTTGAAGCTCATCGCCTGACAATGGCACAAA
ATGAGTGGCGGCGCATGAAAGACAACAACTCGCAGGAATGCCGTAACTGCCACAATTTCGACTTTATGGATCTGACCGCG
CAAAAAGGCGTCGCGGCGAAAATGCACGATCAGGCGGTAAAAGATGGACAGACCTGTATCGATTGCCACAAAGGGATCGC
GCATAAACTGCCGGATATGCGTGATGTTAAACCAGGTTTCTGA

Upstream 100 bases:

>100_bases
TTATTTCTGCCTGCAGTGCCACGTACCGCAGTCTGATACCGCGCCGATTATCGACAATACCTTTACCCCCTCGCAAGGTT
ACGGGAAATAAGAGGTCATT

Downstream 100 bases:

>100_bases
CAGGACGTTGATGAGTGGGAATGCTTGAAGCCAGAGATCTGTACTGCGAGCGGGACGAGAGGACGCTGTTTCGCGGGCTG
TCGTTCACCGTGGACGCCGG

Product: cytochrome c-type protein NapC

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MENSNRKPGWIKRVWRWWRSPSRLALGTLLLIGFIGGIIFWGGFNTGMEKANTEEFCISCHEMRNTVYEEYMETVHYNNR
SGVRATCPDCHVPHEWGPKMIRKIKASKELYAKVFGLIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTA
QKGVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMRDVKPGF

Sequences:

>Translated_200_residues
MENSNRKPGWIKRVWRWWRSPSRLALGTLLLIGFIGGIIFWGGFNTGMEKANTEEFCISCHEMRNTVYEEYMETVHYNNR
SGVRATCPDCHVPHEWGPKMIRKIKASKELYAKVFGLIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTA
QKGVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMRDVKPGF
>Mature_200_residues
MENSNRKPGWIKRVWRWWRSPSRLALGTLLLIGFIGGIIFWGGFNTGMEKANTEEFCISCHEMRNTVYEEYMETVHYNNR
SGVRATCPDCHVPHEWGPKMIRKIKASKELYAKVFGLIDTPQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTA
QKGVAAKMHDQAVKDGQTCIDCHKGIAHKLPDMRDVKPGF

Specific function: Mediates electron flow from quinones to the NapAB complex [H]

COG id: COG3005

COG function: function code C; Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788530, Length=200, Percent_Identity=88.5, Blast_Score=391, Evalue=1e-110,
Organism=Escherichia coli, GI1787230, Length=185, Percent_Identity=48.1081081081081, Blast_Score=181, Evalue=3e-47,
Organism=Escherichia coli, GI1788181, Length=177, Percent_Identity=44.0677966101695, Blast_Score=155, Evalue=2e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011031
- InterPro:   IPR005126
- InterPro:   IPR011885 [H]

Pfam domain/function: PF03264 Cytochrom_NNT [H]

EC number: NA

Molecular weight: Translated: 23250; Mature: 23250

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS51008 MULTIHEME_CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
9.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSNRKPGWIKRVWRWWRSPSRLALGTLLLIGFIGGIIFWGGFNTGMEKANTEEFCISC
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
HEMRNTVYEEYMETVHYNNRSGVRATCPDCHVPHEWGPKMIRKIKASKELYAKVFGLIDT
HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCC
PQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTAQKGVAAKMHDQAVKDGQTCI
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCHHHH
DCHKGIAHKLPDMRDVKPGF
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MENSNRKPGWIKRVWRWWRSPSRLALGTLLLIGFIGGIIFWGGFNTGMEKANTEEFCISC
CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH
HEMRNTVYEEYMETVHYNNRSGVRATCPDCHVPHEWGPKMIRKIKASKELYAKVFGLIDT
HHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHCCC
PQKFEAHRLTMAQNEWRRMKDNNSQECRNCHNFDFMDLTAQKGVAAKMHDQAVKDGQTCI
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCHHHH
DCHKGIAHKLPDMRDVKPGF
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]