Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194734851
Identifier: 194734851
GI number: 194734851
Start: 3113324
End: 3114262
Strand: Reverse
Name: 194734851
Synonym: SeSA_A3221
Alternate gene names: NA
Gene position: 3114262-3113324 (Counterclockwise)
Preceding gene: 194736611
Following gene: 194734498
Centisome position: 66.13
GC content: 42.81
Gene sequence:
>939_bases ATGTTTATTAACTTAGCGCTTTGTTTTTTATACCTGGAGGGAATAATGAAACGATTTATATTTCTGCCATTAATAACATA TTTTCTATTAATGAATGCAATGGCAGCTAACGGAGAAAATAATCCCAGTAATCTATTAGGTGCACCAGTTAATACCGCTA TTTCTGGTGGTTCAGTATTGCCGGAAGGAAAGTTATTAACCGCCGTGAATAGCTCATTTCGCGATAAAGATCATCAAATC GAGGGGCACGGAAGCCCGGATGTTTACTCCCAGATATGGTTATTGAAGATTCGTTACGGTTTGACCGACAGACTGGAATT ATCAACTGTGGGTTCCTATATCAATAACAAACGAGACAATCTGTCTCCTGAGTACATAGAGGGAATGGGCGACCAATCGG TGGGGGTCAATTATGCTTTAATAAGCCAGCGAAGAGGTGATCCGTTTTGGGTTACGGTAGGCGGGGCATTATTACTACCC ACCGGGCAAGATGGAGATAATCATTTGCCTGGGAATAGCGCCTGGGGAGGAAGAGTAACACTCACTTTAACAAAATTATT TACTCCTAACATTAAAGGGGATATGGGTTTTGTATATCAGGGACCATTTGAGCGCGGTAACCAGGACGTGAAACGAGGTA ACGAATTCCAGTGGAATACCCAGGTGCGGTATATGTTTAGCGATTTACCGCTGGATCTTGGTCTGGAAAGTGCCTACAGC AATAATGCCTCTGGAACGAAAAAACTGTCTAATGGCAGCGTAGTTAATAACCATTCTGGAACTACCGAATGGGTTGTTGG TCCATCATTTAATATTGCTGTCGATTCACTGAAGTTATGGTTTGGTGCCGGAGCCTTCTTCCCGGTAATGCAGGAAGCGA AGTCGCCAACCAAAATGGAAGATGTACGCTGGGAATTTAAAATAGGTAAGACCTGGTAA
Upstream 100 bases:
>100_bases CGTTATTTACCTCTCAATATAGTTACAAAAATTTCCGTATATTAAATTCATCAAGTTATTAATTTAAATTATAAATTAAA AATAAGCGTAAATAACGTAA
Downstream 100 bases:
>100_bases GACTCGTTCAAAGTGTTACCCGCCGACTGGCGGGTAACGTGCAGGAGTTAAAGCTTCTCGCCGTTGCTGGCAATCACCTC TTTGTACCAGTTGAAGCTTT
Product: putative outer membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MFINLALCFLYLEGIMKRFIFLPLITYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAVNSSFRDKDHQI EGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEYIEGMGDQSVGVNYALISQRRGDPFWVTVGGALLLP TGQDGDNHLPGNSAWGGRVTLTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYS NNASGTKKLSNGSVVNNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW
Sequences:
>Translated_312_residues MFINLALCFLYLEGIMKRFIFLPLITYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAVNSSFRDKDHQI EGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEYIEGMGDQSVGVNYALISQRRGDPFWVTVGGALLLP TGQDGDNHLPGNSAWGGRVTLTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYS NNASGTKKLSNGSVVNNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW >Mature_312_residues MFINLALCFLYLEGIMKRFIFLPLITYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVLPEGKLLTAVNSSFRDKDHQI EGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDNLSPEYIEGMGDQSVGVNYALISQRRGDPFWVTVGGALLLP TGQDGDNHLPGNSAWGGRVTLTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYS NNASGTKKLSNGSVVNNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKMEDVRWEFKIGKTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34495; Mature: 34495
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINLALCFLYLEGIMKRFIFLPLITYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHCCCCCCCC PEGKLLTAVNSSFRDKDHQIEGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDN CCCCEEEECCCCCCCCCCEECCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCC LSPEYIEGMGDQSVGVNYALISQRRGDPFWVTVGGALLLPTGQDGDNHLPGNSAWGGRVT CCHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEE LTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYS EEEEEEECCCCCCCCCEEEECCHHCCCHHHHCCCCEEECCEEEEEEECCCCCCCCHHHCC NNASGTKKLSNGSVVNNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKME CCCCCCEECCCCCEEECCCCCEEEEECCCCEEEHHHEEEECCCCHHHHHHHHCCCCCCHH DVRWEFKIGKTW HEEEEEEECCCC >Mature Secondary Structure MFINLALCFLYLEGIMKRFIFLPLITYFLLMNAMAANGENNPSNLLGAPVNTAISGGSVL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEECCCCHHCCCCCCCC PEGKLLTAVNSSFRDKDHQIEGHGSPDVYSQIWLLKIRYGLTDRLELSTVGSYINNKRDN CCCCEEEECCCCCCCCCCEECCCCCCHHHHHEEEEEEECCCCCCCHHHHHHHHHCCCCCC LSPEYIEGMGDQSVGVNYALISQRRGDPFWVTVGGALLLPTGQDGDNHLPGNSAWGGRVT CCHHHHHCCCCCCCCCEEEEEECCCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCCEEE LTLTKLFTPNIKGDMGFVYQGPFERGNQDVKRGNEFQWNTQVRYMFSDLPLDLGLESAYS EEEEEEECCCCCCCCCEEEECCHHCCCHHHHCCCCEEECCEEEEEEECCCCCCCCHHHCC NNASGTKKLSNGSVVNNHSGTTEWVVGPSFNIAVDSLKLWFGAGAFFPVMQEAKSPTKME CCCCCCEECCCCCEEECCCCCEEEEECCCCEEEHHHEEEECCCCHHHHHHHHCCCCCCHH DVRWEFKIGKTW HEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA