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The map label for this gene is yhbE [H]

Identifier: 194734771

GI number: 194734771

Start: 3370538

End: 3371503

Strand: Reverse

Name: yhbE [H]

Synonym: SeSA_A3494

Alternate gene names: 194734771

Gene position: 3371503-3370538 (Counterclockwise)

Preceding gene: 194734741

Following gene: 194738014

Centisome position: 71.6

GC content: 52.69

Gene sequence:

>966_bases
ATGAAGCAGCAGGCAGGCATTGGCATTCTTTTAGCGCTCACTACCGCGATGTGCTGGGGAGCGTTGCCAATAGCAATGAA
GCAAGTGCTGGAGGTGATGGAGCCTTCAACCATTGTCTTCTACCGCTTCTTAATGGCCAGTATTGGCCTCGGGGCGATAC
TGGCAGTAAAAAGAAAGCTGCCGCCGCTGCGTATTTTTCGTAAGCCGCGCTGGTTGGTGTTATTAGCGATAGCGACCTGC
GGACTGTTCGGTAATTTCATTTTGTTCAGTTCTTCCCTGCAATATTTAAGCCCAACCGCGTCGCAGGTTATCGGCCAGCT
CTCGCCGGTTGGCATGATGGTCGCCAGCGTCTTTATTCTGAAAGAAAAGATGCGCGGTACGCAGGTGATTGGCGCGCTGA
TGTTATTGAGCGGGCTGGTGATGTTTTTTAACACCAGTCTGATCGAGATTTTTACCCGACTGACCGACTACACCTGGGGC
GTTATTTTTGGCGTAGGCGCGGCGATGGTGTGGGTGAGCTATGGCGTGGCGCAAAAAGTATTATTGCGACGTCTGGCCTC
GCAGCAGATCCTGTTTTTACTGTACACTTTATGTACGATAGCGCTCTTGCCGCTGGCAAAACCGATGGTGATAGCGCAAC
TGAGCGACTGGCAGCTCGCCTGTTTGATTTTCTGCGGGCTAAATACGCTGGTAGGATATGGCGCCCTGGCGGAAGCGATG
GCGCGTTGGCAGGCGGCGCAGGTGAGTGCGATAATCACGCTTACACCGCTATTTACCCTGCTGTTTTCAGATCTTTTATC
TATGGCCTGGCCCGATTTCTTCGCCAGACCGATGTTAAACCTTTTAGGTTATCTCGGTGCGTTTGTCGTGGTTGCGGGCG
CGATGTATTCCGCCATTGGTCATCGTATTTGGGGCGGTTTACGCAAGCATGAAACGGTGGTTTCGCAACCCCGCTCAGGC
GAATGA

Upstream 100 bases:

>100_bases
CCCCGCACCTGTTGCGGGGCTTTTTACATTCGATGGCCGACTAAAATATACCCGTGTGGCTGTGCGAATGCCGTTAACGG
GTCTTTGCAGGGAACACGGC

Downstream 100 bases:

>100_bases
TTTACGGAGAATAAAATGAAGTTTGTTGATGAAGCATCGATTCTGGTCGTTGCAGGCGATGGCGGTAATGGCTGTGTGAG
CTTCCGCCGCGAAAAATATA

Product: putative transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MKQQAGIGILLALTTAMCWGALPIAMKQVLEVMEPSTIVFYRFLMASIGLGAILAVKRKLPPLRIFRKPRWLVLLAIATC
GLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRGTQVIGALMLLSGLVMFFNTSLIEIFTRLTDYTWG
VIFGVGAAMVWVSYGVAQKVLLRRLASQQILFLLYTLCTIALLPLAKPMVIAQLSDWQLACLIFCGLNTLVGYGALAEAM
ARWQAAQVSAIITLTPLFTLLFSDLLSMAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHETVVSQPRSG
E

Sequences:

>Translated_321_residues
MKQQAGIGILLALTTAMCWGALPIAMKQVLEVMEPSTIVFYRFLMASIGLGAILAVKRKLPPLRIFRKPRWLVLLAIATC
GLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRGTQVIGALMLLSGLVMFFNTSLIEIFTRLTDYTWG
VIFGVGAAMVWVSYGVAQKVLLRRLASQQILFLLYTLCTIALLPLAKPMVIAQLSDWQLACLIFCGLNTLVGYGALAEAM
ARWQAAQVSAIITLTPLFTLLFSDLLSMAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHETVVSQPRSG
E
>Mature_321_residues
MKQQAGIGILLALTTAMCWGALPIAMKQVLEVMEPSTIVFYRFLMASIGLGAILAVKRKLPPLRIFRKPRWLVLLAIATC
GLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFILKEKMRGTQVIGALMLLSGLVMFFNTSLIEIFTRLTDYTWG
VIFGVGAAMVWVSYGVAQKVLLRRLASQQILFLLYTLCTIALLPLAKPMVIAQLSDWQLACLIFCGLNTLVGYGALAEAM
ARWQAAQVSAIITLTPLFTLLFSDLLSMAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIGHRIWGGLRKHETVVSQPRSG
E

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Escherichia coli, GI1789575, Length=321, Percent_Identity=93.4579439252336, Blast_Score=603, Evalue=1e-174,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 35151; Mature: 35151

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQQAGIGILLALTTAMCWGALPIAMKQVLEVMEPSTIVFYRFLMASIGLGAILAVKRKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCC
PPLRIFRKPRWLVLLAIATCGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFIL
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCHHHHHHHHHHHH
KEKMRGTQVIGALMLLSGLVMFFNTSLIEIFTRLTDYTWGVIFGVGAAMVWVSYGVAQKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRRLASQQILFLLYTLCTIALLPLAKPMVIAQLSDWQLACLIFCGLNTLVGYGALAEAM
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARWQAAQVSAIITLTPLFTLLFSDLLSMAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRIWGGLRKHETVVSQPRSGE
HHHHCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKQQAGIGILLALTTAMCWGALPIAMKQVLEVMEPSTIVFYRFLMASIGLGAILAVKRKL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHCC
PPLRIFRKPRWLVLLAIATCGLFGNFILFSSSLQYLSPTASQVIGQLSPVGMMVASVFIL
CHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHCCHHHHHHHHHHHH
KEKMRGTQVIGALMLLSGLVMFFNTSLIEIFTRLTDYTWGVIFGVGAAMVWVSYGVAQKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLRRLASQQILFLLYTLCTIALLPLAKPMVIAQLSDWQLACLIFCGLNTLVGYGALAEAM
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
ARWQAAQVSAIITLTPLFTLLFSDLLSMAWPDFFARPMLNLLGYLGAFVVVAGAMYSAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HRIWGGLRKHETVVSQPRSGE
HHHHCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]