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The map label for this gene is flgH [H]

Identifier: 194734750

GI number: 194734750

Start: 1220984

End: 1221649

Strand: Direct

Name: flgH [H]

Synonym: SeSA_A1248

Alternate gene names: 194734750

Gene position: 1220984-1221649 (Clockwise)

Preceding gene: 194734396

Following gene: 194737316

Centisome position: 25.93

GC content: 54.65

Gene sequence:

>666_bases
ATGGCCCTGATGGTCGCGACGCTGACAGGATGCGCCTGGATACCCGCTAAACCGCTCGTGCAGGGGGCGACCACGGCGCA
GCCGATACCTGGCCCGGTACCGGTGGCGAATGGCTCCATATTTCAGTCTGCGCAGCCGATTAATTATGGCTATCAGCCGC
TTTTTGAAGATCGTCGACCGCGTAATATCGGCGATACGCTCACGATTGTGTTACAGGAAAACGTCAGCGCCAGTAAAAGC
TCGTCGGCAAATGCCAGTCGCGACGGCAAAACCAGCTTTGGTTTTGATACGGTACCGCGTTATCTGCAGGGATTATTCGG
TAATTCCCGCGCGGATATGGAGGCCTCCGGCGGCAACTCTTTTAACGGTAAAGGCGGCGCGAATGCCAGCAATACCTTTA
GCGGCACGCTAACCGTGACCGTCGATCAGGTTCTGGCCAATGGCAATTTACACGTCGTGGGGGAAAAACAGATCGCGATT
AATCAGGGAACGGAATTCATCCGCTTCTCCGGCGTGGTAAATCCACGCACCATCAGCGGCAGCAACTCTGTTCCCTCGAC
ACAGGTGGCGGATGCGCGGATTGAATATGTCGGGAACGGCTATATTAACGAAGCGCAAAATATGGGCTGGCTGCAACGTT
TCTTCCTTAATTTGTCGCCGATGTAA

Upstream 100 bases:

>100_bases
TGACGCAACTCTAAGGGGCCGCCGGTGGGGATACGCCACCGGCTCCCTGATTTTGAAGATGAAGGTAATGCAAAAATACG
CGCTTCACGCTTACCCAGTT

Downstream 100 bases:

>100_bases
GCGAGGTGTATGTGTTTAAAGCTCTTGCAGGAATCGTTCTGGCACTGGTTGCCACTCTGGCGCACGCCGAGCGTATTCGG
GATCTGACCAGTGTCCAGGG

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein [H]

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKS
SSANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAI
NQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM

Sequences:

>Translated_221_residues
MALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKS
SSANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAI
NQGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
>Mature_220_residues
ALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNIGDTLTIVLQENVSASKSS
SANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAIN
QGTEFIRFSGVVNPRTISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation [H]

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family [H]

Homologues:

Organism=Escherichia coli, GI1787319, Length=220, Percent_Identity=93.1818181818182, Blast_Score=405, Evalue=1e-115,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000527 [H]

Pfam domain/function: PF02107 FlgH [H]

EC number: NA

Molecular weight: Translated: 23406; Mature: 23275

Theoretical pI: Translated: 8.45; Mature: 8.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRP
CEEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNS
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCC
FNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISG
CCCCCCCCCCCEECCEEEEEEEHHHHCCCEEEEECCEEEECCCCCEEEEECCCCCEEECC
SNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
CCCCCCCHHCCEEEEEECCCCCCCHHCHHHHHHHHHHCCCC
>Mature Secondary Structure 
ALMVATLTGCAWIPAKPLVQGATTAQPIPGPVPVANGSIFQSAQPINYGYQPLFEDRRP
EEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RNIGDTLTIVLQENVSASKSSSANASRDGKTSFGFDTVPRYLQGLFGNSRADMEASGGNS
CCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEECCCCCC
FNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRTISG
CCCCCCCCCCCEECCEEEEEEEHHHHCCCEEEEECCEEEECCCCCEEEEECCCCCEEECC
SNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLNLSPM
CCCCCCCHHCCEEEEEECCCCCCCHHCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA