BacMap

Definition	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome.
Accession	NC_011094
Length	4,709,075

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The map label for this gene is yjgI [H]

Identifier: 194734666

GI number: 194734666

Start: 1741172

End: 1741885

Strand: Direct

Name: yjgI [H]

Synonym: SeSA_A1800

Alternate gene names: 194734666

Gene position: 1741172-1741885 (Clockwise)

Preceding gene: 194738109

Following gene: 194734031

Centisome position: 36.97

GC content: 57.56

Gene sequence:

>714_bases
ATGATGCTATTTCGCAACAAATCTGTACTGGTTTTAGGGGGAAGTCGTGGTATCGGCGCGGCTATTGTACGACGCTTTAG
CGCTGACGGCGCATCGGTCGTTTTCAGCTACGCCGGATCGCGCGAAGCCGCCGAAAAACTGGCAGCGGAAACCGGAAGCA
CCGCCATCCAGACGGATAGCGCCGATCGGGATGCCGTCATCAGCCTCGTGCGTGAGTACGGACCACTGGATATTCTGGTC
GTCAATGCGGGCGTGGCTCTCTTCGGCGATGCGCTGGAACAAGATAGCGATGCGATAGATCGTTTGTTCCGTATTAATAT
CCATGCGCCTTACCATGCGTCAGTCGAAGCAACCCGCAACATGCCGGAAGGTGGACGCATTATTATTATCGGTTCCGTGA
ATGGCGATCGGATGCCCGTACCGGGAATGGCCGCGTACGCCGCCAGTAAATCAGCCCTGCAAGGGCTGGCGCGCGGCCTG
GCTCGTGATTTTGGCCCCCGCGGGATTACGATAAATGTGGTGCAGCCAGGCCCCATTGATACCGACATCAATCCGGAAGA
TGGCCCCATGAAAGAGCTGATGCACAGTTTCATGGCGATCAAACGACACGGAAGACCTGAAGAAGTGGCTGGAATGGTGG
CATGGCTTGCCGGCCCGGAAGCCTCTTTCGTCACCGGCGCGATGCACACCATCGATGGTGCCTTCGGCGCCTGA

Upstream 100 bases:

>100_bases
GTTCGACTATGTTTTGTAGTCATTACTACATAACTCCTTGACGGCATGATTTCATTACGCATATTGTAGTGGCTACTACA
ATATCATAAAGGACATCCTG

Downstream 100 bases:

>100_bases
CGGCCAGGCGAATATCATACGGTTGCCGTCTACGCTCCGGCAACCGTGTTAGAAGCTGTTCATGCGAGAAAACATCCGCA
AGCGCCGGGATCAATCGTGG

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MMLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLAAETGSTAIQTDSADRDAVISLVREYGPLDILV
VNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEATRNMPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGL
ARDFGPRGITINVVQPGPIDTDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA

Sequences:

>Translated_237_residues
MMLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLAAETGSTAIQTDSADRDAVISLVREYGPLDILV
VNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEATRNMPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGL
ARDFGPRGITINVVQPGPIDTDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
>Mature_237_residues
MMLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLAAETGSTAIQTDSADRDAVISLVREYGPLDILV
VNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEATRNMPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGL
ARDFGPRGITINVVQPGPIDTDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=242, Percent_Identity=33.8842975206612, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI5031737, Length=237, Percent_Identity=32.0675105485232, Blast_Score=101, Evalue=7e-22,
Organism=Homo sapiens, GI126723750, Length=245, Percent_Identity=30.6122448979592, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI33667109, Length=216, Percent_Identity=31.0185185185185, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI126723191, Length=183, Percent_Identity=32.7868852459016, Blast_Score=81, Evalue=8e-16,
Organism=Homo sapiens, GI7705925, Length=245, Percent_Identity=28.9795918367347, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI10190704, Length=246, Percent_Identity=30.4878048780488, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI40254992, Length=239, Percent_Identity=28.4518828451883, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI19923817, Length=251, Percent_Identity=28.2868525896414, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI223718074, Length=235, Percent_Identity=29.7872340425532, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI20149619, Length=228, Percent_Identity=28.5087719298246, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI66933014, Length=219, Percent_Identity=26.9406392694064, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI15277342, Length=253, Percent_Identity=27.6679841897233, Blast_Score=69, Evalue=3e-12,
Organism=Escherichia coli, GI2367365, Length=237, Percent_Identity=80.168776371308, Blast_Score=390, Evalue=1e-110,
Organism=Escherichia coli, GI1789378, Length=244, Percent_Identity=32.3770491803279, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=36.0995850622407, Blast_Score=111, Evalue=4e-26,
Organism=Escherichia coli, GI87082100, Length=248, Percent_Identity=33.8709677419355, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI2367175, Length=242, Percent_Identity=32.2314049586777, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=28.4518828451883, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI87082160, Length=251, Percent_Identity=27.4900398406374, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1790717, Length=241, Percent_Identity=26.9709543568465, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1786812, Length=248, Percent_Identity=29.8387096774194, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787905, Length=247, Percent_Identity=31.5789473684211, Blast_Score=74, Evalue=6e-15,
Organism=Escherichia coli, GI1789208, Length=177, Percent_Identity=29.9435028248588, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=25.1968503937008, Blast_Score=62, Evalue=4e-11,
Organism=Escherichia coli, GI1786701, Length=189, Percent_Identity=31.7460317460317, Blast_Score=60, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI17560676, Length=249, Percent_Identity=31.3253012048193, Blast_Score=108, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=32.156862745098, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI115534694, Length=247, Percent_Identity=31.1740890688259, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17562908, Length=258, Percent_Identity=29.0697674418605, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17562904, Length=252, Percent_Identity=28.1746031746032, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17563726, Length=252, Percent_Identity=28.968253968254, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17562906, Length=260, Percent_Identity=26.9230769230769, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994600, Length=189, Percent_Identity=28.042328042328, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17555706, Length=246, Percent_Identity=29.2682926829268, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=189, Percent_Identity=26.984126984127, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25147288, Length=246, Percent_Identity=30.0813008130081, Blast_Score=77, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI17562990, Length=268, Percent_Identity=27.9850746268657, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17536651, Length=249, Percent_Identity=30.1204819277108, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=28.1853281853282, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=269, Percent_Identity=27.1375464684015, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=260, Percent_Identity=27.6923076923077, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17544670, Length=195, Percent_Identity=28.7179487179487, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17560332, Length=261, Percent_Identity=24.5210727969349, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=26.3358778625954, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17536025, Length=248, Percent_Identity=26.6129032258064, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=267, Percent_Identity=27.3408239700375, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508651, Length=245, Percent_Identity=26.1224489795918, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17562910, Length=257, Percent_Identity=23.7354085603113, Blast_Score=66, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6322226, Length=185, Percent_Identity=31.8918918918919, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6324126, Length=255, Percent_Identity=22.3529411764706, Blast_Score=62, Evalue=8e-11,
Organism=Drosophila melanogaster, GI24644339, Length=250, Percent_Identity=32.8, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI28571526, Length=250, Percent_Identity=30.8, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21357041, Length=256, Percent_Identity=30.859375, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI21355319, Length=235, Percent_Identity=31.063829787234, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI23397609, Length=244, Percent_Identity=31.5573770491803, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24643142, Length=241, Percent_Identity=30.2904564315353, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI24639444, Length=244, Percent_Identity=27.8688524590164, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24644337, Length=171, Percent_Identity=31.5789473684211, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24663911, Length=241, Percent_Identity=29.4605809128631, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI116007236, Length=206, Percent_Identity=29.126213592233, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24641232, Length=206, Percent_Identity=27.1844660194175, Blast_Score=64, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21358495, Length=203, Percent_Identity=28.0788177339901, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24906; Mature: 24906

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLAAETGSTAIQTDS
CEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCC
ADRDAVISLVREYGPLDILVVNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEATRN
CCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHEEEEEECCCCCCCHHHHCC
MPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGLARDFGPRGITINVVQPGPID
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MMLFRNKSVLVLGGSRGIGAAIVRRFSADGASVVFSYAGSREAAEKLAAETGSTAIQTDS
CEEEECCEEEEEECCCCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCC
ADRDAVISLVREYGPLDILVVNAGVALFGDALEQDSDAIDRLFRINIHAPYHASVEATRN
CCHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHCCHHHHHHEEEEEECCCCCCCHHHHCC
MPEGGRIIIIGSVNGDRMPVPGMAAYAASKSALQGLARGLARDFGPRGITINVVQPGPID
CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
TDINPEDGPMKELMHSFMAIKRHGRPEEVAGMVAWLAGPEASFVTGAMHTIDGAFGA
CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]