Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is yhbT [H]
Identifier: 194734551
GI number: 194734551
Start: 3341374
End: 3341898
Strand: Reverse
Name: yhbT [H]
Synonym: SeSA_A3462
Alternate gene names: 194734551
Gene position: 3341898-3341374 (Counterclockwise)
Preceding gene: 194735590
Following gene: 194735744
Centisome position: 70.97
GC content: 51.24
Gene sequence:
>525_bases GTGTTAGATAAACTGCGTTCACGCTTAGTCCATGCTGGCCCGTCTCTGATGAGTGTACCGGTTAAACTGACGCCCTTTGC GCTAAAGCGCCAGGTTCTGGAACAGGTTCTGAGCTGGCAGTTTCGTCAGGCGCTGGCCGATGGAGAGCTGGAATTCCTCG AAGGTCGTTGGTTAAGCATTCATGTTCGTGACATCGACTTAAAATGGTATACCACGGTTGAAAATGAAAAGCTGATCGTT AGCCAGCAGGCGGATGCTGACGTCAGTTTTAGCGCCGACGCCAGCGATCTGCTAATGATAGCTGCCCGTAAACAGGACCC GGATACGCTCTTTTTCCAGCGTCGACTGGTCATTGAAGGCGATACTGAGTTAGGGTTGTATGTGAAGAATCTGATGGACG CCATCGAACTGGAGCAGATGCCGAAAGCGTTACGCGTTATGCTGCTGCAACTGGCGGATTTTGTTGAGGCGGGTATGAAA AACTCGCCGGAAACCAAACAGACCTCGGTAGGTGAACCATGCTAA
Upstream 100 bases:
>100_bases TAATGGGGTAGAAAATCAGACCCAATTGTTGATTTACGCCGCCATGTGATTTATTGGATATGGCAAAATAACAGGACTAT TGAAACAGGGAGTAAAGCTC
Downstream 100 bases:
>100_bases TTCGAGTAGAAATTCCCATTGATGCGCCTGGTATTGATGCGCTGTTACGCCGTTCATTCGAAAGCGATGCGGAAGCGAAG CTGGTTCACGATTTGCGTGA
Product: sterol-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIV SQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMK NSPETKQTSVGEPC
Sequences:
>Translated_174_residues MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIV SQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMK NSPETKQTSVGEPC >Mature_174_residues MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSIHVRDIDLKWYTTVENEKLIV SQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEGDTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMK NSPETKQTSVGEPC
Specific function: Unknown
COG id: COG3154
COG function: function code I; Putative lipid carrier protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789547, Length=174, Percent_Identity=91.3793103448276, Blast_Score=327, Evalue=3e-91,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003033 - InterPro: IPR016830 [H]
Pfam domain/function: PF02036 SCP2 [H]
EC number: NA
Molecular weight: Translated: 19748; Mature: 19748
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSI CHHHHHHHHHHCCCCCEECCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE HVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEG EEEEEEEEEEEEECCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCEEEEEEEEEEC DTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSI CHHHHHHHHHHCCCCCEECCCEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEE HVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEG EEEEEEEEEEEEECCCEEEEEECCCCCEEECCCCCCEEEEEECCCCCCCEEEEEEEEEEC DTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]