Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is yceA [H]
Identifier: 194734541
GI number: 194734541
Start: 1202062
End: 1203114
Strand: Direct
Name: yceA [H]
Synonym: SeSA_A1223
Alternate gene names: 194734541
Gene position: 1202062-1203114 (Clockwise)
Preceding gene: 194735434
Following gene: 194735304
Centisome position: 25.53
GC content: 50.71
Gene sequence:
>1053_bases ATGCCAGTGTTACACAACCGCATCTCTAATGACGAGCTGAAAGCCAAAATGCTGGCGGAAAGCGAGCCGCGTACGACAAT TTCTTTTTATAAATATTTCACAATCGCCTCGCCGCAACAGACGCGGGACGCGTTGTATCAGGTGTTTACGGCGTTGGACG TTTTTGGTCGCGTTTACCTGGCGCATGAAGGCATCAATGCGCAAATCAGCGTGCCGCAAAGCAAGCTCGAGACGTTTCGT CAACAGCTTTATACGTTCGACCCCGCGCTGGACGGGCTGCGTTTAAATATCGCTCTGGAGGATGACGGAAAGTCATTTTG GGTGCTGCGTATGAAAGTTCGCGACCGTATCGTTGCTGACGGTATTGATGATCCGACTTTTGACGCCAGTAATGTCGGCG ATTATCTGAAGGCGGCAGATGTGAATGCGATGCTGGACGATCCTGACGCGGTCTTTATTGATATGCGCAACCATTATGAG TATGAAGTCGGCCATTTCGAAAATGCTCTGGAAATCCCGGCGGATACGTTTCGTGAACAGTTGCCAAAAGCGGTTGAAAT GCTGCGGGAACATGCAGATAAAAAGATAGTGATGTACTGTACCGGCGGTATTCGTTGTGAGAAAGCCAGCGCCTGGATGA AACACAACGGTTTCAATAAAGTCTGGCATATTGAGGGTGGCATCATTGAGTACGCCCGTCGCGCGCGCGAGCAGGGGCTT CCCGTTCGCTTTATCGGCAAAAACTTTGTATTTGATGAACGAATGGGCGAACGAATCTCGGATGAGGTTATCGCGCATTG CCATCAGTGCGGCGCGCCCTGCGATAGCCATACCAACTGCAAAAATGACGGTTGCCATCTGCTGTTTATCCAGTGTCCGC AGTGCGCCAGTAAATTTAACGGCTGCTGTAGTGAACAATGCTGTGAAGAGTTGGCCTTGCCGGAGGAAGAACAGCGCCGA CGTCGCGCGGGTCGCGAGAACGGCAACAAAATTTTTAATAAATCGCGTGGTCGGCTTAATAGCAAATTGAGCATTCCCGA TCCGGCTGAGTAA
Upstream 100 bases:
>100_bases AGCAGGAAATGTAGCGCAAAATGTGTGGATGTAAATTGGCGAGACTTGCCTTATCATGCCTGCCCACTTTATTTTTTGCT GATTGCAGGATACGTACACC
Downstream 100 bases:
>100_bases TATTTTGCCGGATAGCCGCGTAAAGGCCGCTATCCGGCATTTCGCCAGGCGTTACTTCTGCTGAACGCCTTCTACTGAGA TGATAAGCTCAACCTCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MPVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYLAHEGINAQISVPQSKLETFR QQLYTFDPALDGLRLNIALEDDGKSFWVLRMKVRDRIVADGIDDPTFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL PVRFIGKNFVFDERMGERISDEVIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPQCASKFNGCCSEQCCEELALPEEEQRR RRAGRENGNKIFNKSRGRLNSKLSIPDPAE
Sequences:
>Translated_350_residues MPVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYLAHEGINAQISVPQSKLETFR QQLYTFDPALDGLRLNIALEDDGKSFWVLRMKVRDRIVADGIDDPTFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYE YEVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL PVRFIGKNFVFDERMGERISDEVIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPQCASKFNGCCSEQCCEELALPEEEQRR RRAGRENGNKIFNKSRGRLNSKLSIPDPAE >Mature_349_residues PVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYLAHEGINAQISVPQSKLETFRQ QLYTFDPALDGLRLNIALEDDGKSFWVLRMKVRDRIVADGIDDPTFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYEY EVGHFENALEIPADTFREQLPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGLP VRFIGKNFVFDERMGERISDEVIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPQCASKFNGCCSEQCCEELALPEEEQRRR RAGRENGNKIFNKSRGRLNSKLSIPDPAE
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=305, Percent_Identity=29.5081967213115, Blast_Score=120, Evalue=2e-27, Organism=Escherichia coli, GI1787294, Length=350, Percent_Identity=89.7142857142857, Blast_Score=669, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 39936; Mature: 39804
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYL CCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHE AHEGINAQISVPQSKLETFRQQLYTFDPALDGLRLNIALEDDGKSFWVLRMKVRDRIVAD EECCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHC GIDDPTFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYEYEVGHFENALEIPADTFREQ CCCCCCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHH LPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL HHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCC PVRFIGKNFVFDERMGERISDEVIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPQCASKFN CEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHC GCCSEQCCEELALPEEEQRRRRAGRENGNKIFNKSRGRLNSKLSIPDPAE CCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure PVLHNRISNDELKAKMLAESEPRTTISFYKYFTIASPQQTRDALYQVFTALDVFGRVYL CCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHE AHEGINAQISVPQSKLETFRQQLYTFDPALDGLRLNIALEDDGKSFWVLRMKVRDRIVAD EECCCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCEEEEEEEEHHHHHHHC GIDDPTFDASNVGDYLKAADVNAMLDDPDAVFIDMRNHYEYEVGHFENALEIPADTFREQ CCCCCCCCCHHHHHHHHHCCCCCEECCCCEEEEEECCCCEEECCCCCCCCCCCHHHHHHH LPKAVEMLREHADKKIVMYCTGGIRCEKASAWMKHNGFNKVWHIEGGIIEYARRAREQGL HHHHHHHHHHHCCCEEEEEECCCEEECHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCC PVRFIGKNFVFDERMGERISDEVIAHCHQCGAPCDSHTNCKNDGCHLLFIQCPQCASKFN CEEECCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECHHHHHHHC GCCSEQCCEELALPEEEQRRRRAGRENGNKIFNKSRGRLNSKLSIPDPAE CCCHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA