Click here to switch to the map view.

The map label for this gene is ycgN [C]

Identifier: 194734335

GI number: 194734335

Start: 1888428

End: 1888889

Strand: Reverse

Name: ycgN [C]

Synonym: SeSA_A1953

Alternate gene names: 194734335

Gene position: 1888889-1888428 (Counterclockwise)

Preceding gene: 194737229

Following gene: 194733986

Centisome position: 40.11

GC content: 49.35

Gene sequence:

>462_bases
ATGGCGGATACTTTAATGAGCGATACACCTTTCTGGCAACGTAAAACCCTGGATGAAATGACCGATGCCGAGTGGGAGTC
GCTGTGCGATGGCTGCGGTCAATGCTGCCTGCATAAGCTGATGGATGAAGATACAGATGAAATCTACTTCACCAACGTGG
CGTGCAGGCAATTAAATATCAAAACGTGCCAGTGCCGTCATTATGAACGCCGTTTTGAATTTGAACCCGACTGTATCAAA
CTCACTCGCGAAAACTTGCCAGACTTTGAATGGTTGCCGATGACCTGCGCCTACCGTTTGTTGGCGGAAGGTAAGCCCTT
GCCGACGTGGCATCCGCTGCTGACTGGATCGAAAGCCGCTATGCATGGCGAGCGAATTTCTGTCCGTCATATCGCGGTTA
AAGAATCCGAAGTACGGGACTGGCAGGATCATATTTTAAATAAACCGTCGTGGGCAGAATAA

Upstream 100 bases:

>100_bases
CGTTGTCTACCCGCGTTCTGTAAAATCTGCTTGCCGCCTTCAGCGGCGGTAAAACTTGCATCTGCAGGCCAGACTGGTTA
TAAGGTGCAGCTTTAGTGCA

Downstream 100 bases:

>100_bases
GTCTTCGGCAAAACGGCTGATTGTTTACAATTCTTTAATTTACGCCGGGCGGCCCCTGAAATCAGGAATTGCGTGCAAAT
TCCGTCACCTGGCGTTATCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MADTLMSDTPFWQRKTLDEMTDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRHYERRFEFEPDCIK
LTRENLPDFEWLPMTCAYRLLAEGKPLPTWHPLLTGSKAAMHGERISVRHIAVKESEVRDWQDHILNKPSWAE

Sequences:

>Translated_153_residues
MADTLMSDTPFWQRKTLDEMTDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRHYERRFEFEPDCIK
LTRENLPDFEWLPMTCAYRLLAEGKPLPTWHPLLTGSKAAMHGERISVRHIAVKESEVRDWQDHILNKPSWAE
>Mature_152_residues
ADTLMSDTPFWQRKTLDEMTDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNIKTCQCRHYERRFEFEPDCIKL
TRENLPDFEWLPMTCAYRLLAEGKPLPTWHPLLTGSKAAMHGERISVRHIAVKESEVRDWQDHILNKPSWAE

Specific function: Unknown

COG id: COG2983

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0260 family [H]

Homologues:

Organism=Escherichia coli, GI145693117, Length=153, Percent_Identity=92.156862745098, Blast_Score=298, Evalue=1e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008228
- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 18011; Mature: 17879

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
9.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTLMSDTPFWQRKTLDEMTDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNI
CCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCC
KTCQCRHYERRFEFEPDCIKLTRENLPDFEWLPMTCAYRLLAEGKPLPTWHPLLTGSKAA
CHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHH
MHGERISVRHIAVKESEVRDWQDHILNKPSWAE
HCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ADTLMSDTPFWQRKTLDEMTDAEWESLCDGCGQCCLHKLMDEDTDEIYFTNVACRQLNI
CCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHCCC
KTCQCRHYERRFEFEPDCIKLTRENLPDFEWLPMTCAYRLLAEGKPLPTWHPLLTGSKAA
CHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCHHH
MHGERISVRHIAVKESEVRDWQDHILNKPSWAE
HCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA