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The map label for this gene is ndpA [C]

Identifier: 194734307

GI number: 194734307

Start: 2347304

End: 2348311

Strand: Reverse

Name: ndpA [C]

Synonym: SeSA_A2465

Alternate gene names: 194734307

Gene position: 2348311-2347304 (Counterclockwise)

Preceding gene: 194737704

Following gene: 194737206

Centisome position: 49.87

GC content: 53.97

Gene sequence:

>1008_bases
ATGAGTCTGGATATCAACCAGATTGCCCTGCACCAGCTTATCAAGCGCGATGAGCAAAATCTTGAGCTGGTCTTGCGCGA
TTCATTGCTGGAGCCGACAACCACCGTTGTCGAGATGGTGGCTGAACTGCATCGGGTCTATAGCGCCAAGAATAAGGCGT
ATGGCCTGTTTAGCGAAGAGAGTGAACTGGCGCAAGCGCTGCGGTTGCAACGTCAGGGGGAAGAAGATTTTCTTGCCTTT
AGCCGGGCGGCGACCGGACGCCTGCGTGACGAACTGGCGAAATATCCCTTTGCGGACGGCGGCATTGTATTGTTCTGCCA
TTATCGTTACCTGGCGGTGGAGTATCTGCTGGTTACGGTACTGAACAACCTGAGCAGTATGCGGGTCAATGAAAATCTGG
ACATTAACCCGACGCATTATCTTGATATTAACCATGCGGATATCGTGGCGCGTATCGATCTTACCGAGTGGGAAACTAAT
CCGCAATCGACCCGCTATCTGACGTTTCTCAAAGGTCGGGTAGGGCGCAAGGTCGCTGACTTCTTTATGGATTTCCTCGG
CGCCAGCGAAGGGTTGAACGCCAAAGCGCAGAATCGCGGCCTGTTGCAGGCAGTGGATGATTTCACCGCAGAAGCGCAGT
TGGATAAAGCAGAACGTCAGAACGTGCGCCAGCAGGTGTACAGCTATTGCAACGAGCAGTTACAAGCCGGGGAAGAGATT
GAGCTGGAATCGCTGTCTAAAGAGCTTTCCGGCGTCAGTGAAGTCAGCTTCAGCGAATTTACCGCCGAAAAAGGCTATGA
GCTGGAAGAGAGCTTCCCGGCAGATCGCAGTACGCTACGCCAGTTAACCAAATATGCCGGCAGCGGCGGCGGGTTAACGA
TTAACTTTGATGCGATGCTGCTGGGCGAGCGGATTTTCTGGGACCCGGCGACCGATACCCTGACTATCAAAGGGACGCCG
CCGAATTTGCGCGATCAGTTGCAGCGACGCACGTCGGGCGGGAAATAA

Upstream 100 bases:

>100_bases
TCATTCGCGTTACGGATAACGCCTGAAATGACAGGGCGATTGCTTGCGTCTTCCGGCAGGCGGTGGTTGAATACCGCCCG
GTCTTAAAGGAGAGTTTATC

Downstream 100 bases:

>100_bases
AGTCGCTTGCCGGATGGGGGAGGAAACGCCTTATCCGGCAAGTGTGATTCATCTTTACCGCGAACTAAATTCCATAAAAA
AACCCCGCCGGGGCGGGGTT

Product: nucleoid-associated protein NdpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFSEESELAQALRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGGK

Sequences:

>Translated_335_residues
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFSEESELAQALRLQRQGEEDFLAF
SRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETN
PQSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTP
PNLRDQLQRRTSGGK
>Mature_334_residues
SLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFSEESELAQALRLQRQGEEDFLAFS
RAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTVLNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNP
QSTRYLTFLKGRVGRKVADFFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEIE
LESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAMLLGERIFWDPATDTLTIKGTPP
NLRDQLQRRTSGGK

Specific function: Unknown

COG id: COG3081

COG function: function code R; Nucleoid-associated protein

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YejK family [H]

Homologues:

Organism=Escherichia coli, GI1788513, Length=334, Percent_Identity=96.7065868263473, Blast_Score=667, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007358 [H]

Pfam domain/function: PF04245 NA37 [H]

EC number: NA

Molecular weight: Translated: 37850; Mature: 37719

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFSEE
CCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH
LNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQSTRYLTFLKGRVGRKVAD
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH
FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAML
CHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHH
LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK
HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SLDINQIALHQLIKRDEQNLELVLRDSLLEPTTTVVEMVAELHRVYSAKNKAYGLFSEE
CCCHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
SELAQALRLQRQGEEDFLAFSRAATGRLRDELAKYPFADGGIVLFCHYRYLAVEYLLVTV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHH
LNNLSSMRVNENLDINPTHYLDINHADIVARIDLTEWETNPQSTRYLTFLKGRVGRKVAD
HHHHHHHCCCCCCCCCCCEEEECCCCCEEEEEECHHCCCCCCCHHHHHHHHHHHHHHHHH
FFMDFLGASEGLNAKAQNRGLLQAVDDFTAEAQLDKAERQNVRQQVYSYCNEQLQAGEEI
HHHHHHCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
ELESLSKELSGVSEVSFSEFTAEKGYELEESFPADRSTLRQLTKYAGSGGGLTINFDAML
CHHHHHHHHCCHHHHHHHHHHHHCCCCCHHCCCCCHHHHHHHHHHCCCCCCEEEEEHHHH
LGERIFWDPATDTLTIKGTPPNLRDQLQRRTSGGK
HCCEEEECCCCCEEEEECCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA