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The map label for this gene is sseB [H]

Identifier: 194734193

GI number: 194734193

Start: 1447839

End: 1448429

Strand: Direct

Name: sseB [H]

Synonym: SeSA_A1494

Alternate gene names: 194734193

Gene position: 1447839-1448429 (Clockwise)

Preceding gene: 194737063

Following gene: 194734854

Centisome position: 30.75

GC content: 43.15

Gene sequence:

>591_bases
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAGCCCTATTGTGTTTAAAAATAGTTTCGGCGTTAGCAACACTGATAC
CGGGGGGCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGTTATTC
AGGCTATTGCAAACGATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTACCTGAGGATGTAATTAAATACAT
GCGTGATAATGGTATTCTCATCGATGGTCTGACCATTGATGAATATATGGCTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGTCTACAGGCGGTCAAAGCGGCTTTGGATAACGATGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ATAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Upstream 100 bases:

>100_bases
AATAGTAAGTTTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAA
AAACAAAAAGGTAAAGCATA

Downstream 100 bases:

>100_bases
AAAAAGACCCGACCCTACAACAGGCACATGACACGATGCGGTTTTTCCGGCGTGGCGGCTCGCTGCGTATGTTGTTGGAT
GACGATGTTACACAGCCGCT

Product: secretion system effector SseB

Products: NA

Alternate protein names: Secretion system effector B [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MSSGNILWGSQSPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGLTIDEYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQI
IIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

Sequences:

>Translated_196_residues
MSSGNILWGSQSPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGLTIDEYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQI
IIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS
>Mature_195_residues
SSGNILWGSQSPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDKFIEVQKNAERARNTQEKSNEM
DEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGLTIDEYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQII
IQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

Specific function: Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. May act as a translocator that mediates translocation of SPI-2 TTSS effector proteins from intraphagosomal bacterial cells into the host cells. SseB i

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Cell surface. Note=Secreted via type III secretion system 2 (SPI-2 TTSS). After secretion, localizes mainly on the surface of the bacterial cell [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the espA/sseB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005095 [H]

Pfam domain/function: PF03433 EspA [H]

EC number: NA

Molecular weight: Translated: 21464; Mature: 21332

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGNILWGSQSPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDK
CCCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCC
FIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGLTID
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
EYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQIIIQKMSQELNAVLTQLTGLI
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKWGEISSMIAQKTYS
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSGNILWGSQSPIVFKNSFGVSNTDTGGQDDLSQQNPFAEGYGVLLILLMVIQAIANDK
CCCCEEECCCCCEEEECCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHCCCC
FIEVQKNAERARNTQEKSNEMDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGLTID
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEEECCCHH
EYMAKYGDHGKLDKGGLQAVKAALDNDANRNTDLMSQGQIIIQKMSQELNAVLTQLTGLI
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SKWGEISSMIAQKTYS
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9786193; 9786194; 11677609 [H]