Click here to switch to the map view.

The map label for this gene is ydjA [H]

Identifier: 194734120

GI number: 194734120

Start: 1341612

End: 1342163

Strand: Direct

Name: ydjA [H]

Synonym: SeSA_A1390

Alternate gene names: 194734120

Gene position: 1341612-1342163 (Clockwise)

Preceding gene: 194738192

Following gene: 194735899

Centisome position: 28.49

GC content: 56.16

Gene sequence:

>552_bases
ATGGATGCACTAGAACTGCTGGTCAACCGTCGTAGCGCCTCTCGTCTCGCAGAACCGGCGCCTGTCGGAGAGCAATTACA
GAACATTCTGCGGGCGGGAATGCGTGTTCCCGATCATAAATCTCTACAGCCGTGGCGTTTTTTTGTGATTGAAGGAGAGG
GGCGCGACCGCTTCAGCGCCGTGCTTGAACAAGGCGCTGTCGCTGCCGGGGGCGATGAGAACGCGATCGAAAAAGCGCGT
AATGCGCCGTTTCGCGCGCCGCTGATCATTACCGTGGTGGCAAAATGCGAAGAAAACCATAAGGTTCCGGTGTGGGAACA
GGAGATGTCTGCCGGATGTGCGGTAATGGCGATGCAAATGGCGGCGATTGCGCAAGGGTTTAATGGTATCTGGCGTAGCG
GTGCATTAACGGAGAGCGCTATCGTGCGGGAAGCCTTTGAGTGCCGCCCTCAGGATAAAATTGTTGGTTTTCTCTATCTC
GGCACGCCGCAGCTCAAAGCGTCAACGACGATCAGTACCCCCGACCCCACGCCGTTTGTGCGTTATTTCTGA

Upstream 100 bases:

>100_bases
ACCCATCAGGCAGTTGTCAGCAGGAATCACTGCCTGCGCTGTAACAAAATCCGCTCTCGTGTTAATTTTGTGAATAAATA
TCATTGCTGGAGTTAATCAA

Downstream 100 bases:

>100_bases
CGCTGAGGGATAAAACTGTCTGGATTCTGAGCAAAGGCGCGGTAATTCAGACAGTGATACTTACCACATCAGGGAATGAG
CGCTACCATAGCGCGAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDALELLVNRRSASRLAEPAPVGEQLQNILRAGMRVPDHKSLQPWRFFVIEGEGRDRFSAVLEQGAVAAGGDENAIEKAR
NAPFRAPLIITVVAKCEENHKVPVWEQEMSAGCAVMAMQMAAIAQGFNGIWRSGALTESAIVREAFECRPQDKIVGFLYL
GTPQLKASTTISTPDPTPFVRYF

Sequences:

>Translated_183_residues
MDALELLVNRRSASRLAEPAPVGEQLQNILRAGMRVPDHKSLQPWRFFVIEGEGRDRFSAVLEQGAVAAGGDENAIEKAR
NAPFRAPLIITVVAKCEENHKVPVWEQEMSAGCAVMAMQMAAIAQGFNGIWRSGALTESAIVREAFECRPQDKIVGFLYL
GTPQLKASTTISTPDPTPFVRYF
>Mature_183_residues
MDALELLVNRRSASRLAEPAPVGEQLQNILRAGMRVPDHKSLQPWRFFVIEGEGRDRFSAVLEQGAVAAGGDENAIEKAR
NAPFRAPLIITVVAKCEENHKVPVWEQEMSAGCAVMAMQMAAIAQGFNGIWRSGALTESAIVREAFECRPQDKIVGFLYL
GTPQLKASTTISTPDPTPFVRYF

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

Organism=Escherichia coli, GI1788063, Length=183, Percent_Identity=87.9781420765027, Blast_Score=339, Evalue=5e-95,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20114; Mature: 20114

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDALELLVNRRSASRLAEPAPVGEQLQNILRAGMRVPDHKSLQPWRFFVIEGEGRDRFSA
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHH
VLEQGAVAAGGDENAIEKARNAPFRAPLIITVVAKCEENHKVPVWEQEMSAGCAVMAMQM
HHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCHHHHHCCHHHHHHHH
AAIAQGFNGIWRSGALTESAIVREAFECRPQDKIVGFLYLGTPQLKASTTISTPDPTPFV
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCEEECCCCCCCCC
RYF
CCC
>Mature Secondary Structure
MDALELLVNRRSASRLAEPAPVGEQLQNILRAGMRVPDHKSLQPWRFFVIEGEGRDRFSA
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCHHHHH
VLEQGAVAAGGDENAIEKARNAPFRAPLIITVVAKCEENHKVPVWEQEMSAGCAVMAMQM
HHHHCCCCCCCCHHHHHHHHCCCCCCCEEEEEEEHHCCCCCCCCCHHHHHCCHHHHHHHH
AAIAQGFNGIWRSGALTESAIVREAFECRPQDKIVGFLYLGTPQLKASTTISTPDPTPFV
HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHEEEEEEECCCCCCCCEEECCCCCCCCC
RYF
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]