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The map label for this gene is fliS

Identifier: 194734080

GI number: 194734080

Start: 2027992

End: 2028399

Strand: Direct

Name: fliS

Synonym: SeSA_A2118

Alternate gene names: 194734080

Gene position: 2027992-2028399 (Clockwise)

Preceding gene: 194738249

Following gene: 194734713

Centisome position: 43.07

GC content: 49.51

Gene sequence:

>408_bases
ATGTACACCGCGAGCGGTATCAAAGCTTATGCGCAAGTCAGCGTGGAAAGCGCCGTGATGAGCGCCAGCCCGCATCAGTT
GATTGAAATGTTGTTTGATGGCGCGAATAGCGCTCTGGTGCGCGCTCGCCTGTTTTTAGAACAAGGCGATGTTGTCGCGA
AAGGTGAAGCGTTAAGCAAAGCCATTAATATTATCGATAACGGGCTGAAAGCCGGCCTCGATCAGGAAAAAGGCGGTGAG
ATTGCGACGAATCTTTCCGAGCTATACGACTATATGATTCGCCGTTTACTGCAGGCTAATTTGCGTAACGACGCTCAGGC
CATCGAAGAAGTGGAAGGGTTACTCAGCAATATTGCAGAAGCCTGGAAACAGATTTCACCGAAAGCATCTTTCCAGGAGT
CTCGTTAA

Upstream 100 bases:

>100_bases
TTACCCAACTGGATACCATGATGAGTAAACTGAATAACACCAGTAGTTATTTGACCCAGCAATTTACAGCTATGAACAAG
TCCTGATAACAGAGGTCACC

Downstream 100 bases:

>100_bases
TGACCTCAACCGTGGAGTTTATCAACCGTTGGCAGCGTATTGCGCTGCTCAGTCAATCGCTGCTTGAACTTGCGCAGCGA
GGTGAATGGGATCTCTTATT

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARLFLEQGDVVAKGEALSKAINIIDNGLKAGLDQEKGGE
IATNLSELYDYMIRRLLQANLRNDAQAIEEVEGLLSNIAEAWKQISPKASFQESR

Sequences:

>Translated_135_residues
MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARLFLEQGDVVAKGEALSKAINIIDNGLKAGLDQEKGGE
IATNLSELYDYMIRRLLQANLRNDAQAIEEVEGLLSNIAEAWKQISPKASFQESR
>Mature_135_residues
MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARLFLEQGDVVAKGEALSKAINIIDNGLKAGLDQEKGGE
IATNLSELYDYMIRRLLQANLRNDAQAIEEVEGLLSNIAEAWKQISPKASFQESR

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family

Homologues:

Organism=Escherichia coli, GI1788234, Length=129, Percent_Identity=62.015503875969, Blast_Score=160, Evalue=3e-41,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLIS_SALTY (P26609)

Other databases:

- EMBL:   M85241
- EMBL:   AE006468
- RefSeq:   NP_460914.1
- ProteinModelPortal:   P26609
- SMR:   P26609
- IntAct:   P26609
- MINT:   MINT-2831255
- PRIDE:   P26609
- GeneID:   1253482
- GenomeReviews:   AE006468_GR
- KEGG:   stm:STM1961
- HOGENOM:   HBG692036
- OMA:   AQSRYAI
- ProtClustDB:   PRK05685
- BioCyc:   STYP99287:STM1961-MONOMER
- GO:   GO:0005829
- InterPro:   IPR003713
- Gene3D:   G3DSA:1.20.120.340
- TIGRFAMs:   TIGR00208

Pfam domain/function: PF02561 FliS; SSF101116 FliS

EC number: NA

Molecular weight: Translated: 14687; Mature: 14687

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARLFLEQGDVVAKGEALSK
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHHHHH
AINIIDNGLKAGLDQEKGGEIATNLSELYDYMIRRLLQANLRNDAQAIEEVEGLLSNIAE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AWKQISPKASFQESR
HHHHCCCCCCCCCCC
>Mature Secondary Structure
MYTASGIKAYAQVSVESAVMSASPHQLIEMLFDGANSALVRARLFLEQGDVVAKGEALSK
CCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECHHHHHH
AINIIDNGLKAGLDQEKGGEIATNLSELYDYMIRRLLQANLRNDAQAIEEVEGLLSNIAE
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
AWKQISPKASFQESR
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609