Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is 194734022
Identifier: 194734022
GI number: 194734022
Start: 1650505
End: 1651830
Strand: Direct
Name: 194734022
Synonym: SeSA_A1711
Alternate gene names: NA
Gene position: 1650505-1651830 (Clockwise)
Preceding gene: 194735315
Following gene: 194737013
Centisome position: 35.05
GC content: 55.66
Gene sequence:
>1326_bases GTGGCAAAATCTCTCTTGCGCAGCGGCAATCTGGATGATTATCAGGCCGTGGGCGGCGGCGGTCAGGCCGTATTTGAATC AGCATTGCAAATTCGCGAAACGCTTCGTCTGCGTAAACAGCAGGCGATGGTTGACTGTCTGGCGATTCCGCAACTTAACG ATAATGGCGATCGGGTTGACTGGTATTCGCCGATTGAAGGTCAGGCGATAGCGTGGAAAGCGGCTGACGAAGAGACACGT TCTCGGGCTTTACGTTATTTAGCCAGCACTTTTGAAAGCGCGGCTGCACTCAGTCGCAAAAGTCTGCAATCCGGTAAAAC AGCGCTTCAGCTATTTGGATCGCTACTTGAGAAAGCGACGCAATTTCCCGGCGAAAATCATGTTTTCCTGGTTAACGGCA AACCGGTTATCACCTTCTGGGGATTCGTTAATCTCAACGAAAATACACGCGATGATGTGCTGGACTGCCTGCGGATAACC GAGGCAATCCCCGACATCCCTCTGGTCGAGCCGGAGCCGGAGCCCGAAGAAAAGCCGCTGGTAGAGGCGGCGTTTAGTCA GGCGGATGAACCCTTGTTAACGTCTGTCATTGAGCCGCCGAAAATGCCGGAGGAACCTGTTGCGCCGCCCGTTATCGTTA GCGAGCCGAAGCCGGCCACACCCATCCCGGTTGCTGAGGCGAAAAGAGCTCGCCGTCTACCGCTGTGGAGCTTACCTGTC GCTGCCGTGGTTATCGCCGCCGTCGCCACGCCTTTTTTCTGGCCATCTTCATCCGTTGACGGGGCCTCTCCTGTTCGCGC CGCGCCTGTCGCTACCGCGAAAACTGACGTTACCCCATTGCCTGAACTCACCGCGCATTTGCCGCTGCATCGCGCTGAGG TGACGCCCGCCCCCAAAGCGGCGCCGTTGCCGGAAGCGCCTGTTATTATTGCCGCTATCCCCAAAGACGCACTGGTGATG GACAGTACGCAGATGAAGCTTGGAACCACGCGCTTTTTAAACGGTAGCTGGCGGGTCAGCGTGGATGTCAAAGATCCGAT TACCGGCAAGCCGCCCTCTCTGCGTTATCAGATCCAAAATAACAAAGGTATCGCGCGCGTAGTACATGGCGATAACGTGG TTTGTCGGGCGGAAATTTTCTCTGGTCTGCATCAAACGGGCGAGCTGATGATTAAAAGTCGCGGCAATGCGCGCTGCACC GACGGTTCACGTTATCCGATGCCGGAAATTACCTGTAAAGCAGGCGTCAATGACGTCGCAACCTGTACCGCCCGTTATGG CGACCACGCGGCAATTCCGTTGACGTTTAAAAAGATAGGTGCCTGA
Upstream 100 bases:
>100_bases TAATAGACCGAGAATTCGCGCCTTTTTGCCTTTCTTCCGCCGTTTGCTTGCGTATAGACCCCGTAAAGTAGACGCGTGAA GAAGTCTAAGGGATAACAAC
Downstream 100 bases:
>100_bases TTTTATGTTGGTCAATCTGTGTGATTACAAACAGAGCGTCACGCTCATTGCAAACAGCGGCGTCCAGTTTCTTGATTTTG GCTTAACGCCGCAAGAGTCG
Product: ssrAB activated gene
Products: NA
Alternate protein names: SsrAB Activated Protein; SsrAB Activated Gene; Virulence Factor; Virulence Effector Protein SrfA; Myosin Light Chain Kinase Smooth
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MAKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETR SRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRIT EAIPDIPLVEPEPEPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPVAPPVIVSEPKPATPIPVAEAKRARRLPLWSLPV AAVVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAPLPEAPVIIAAIPKDALVM DSTQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCT DGSRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA
Sequences:
>Translated_441_residues MAKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETR SRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRIT EAIPDIPLVEPEPEPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPVAPPVIVSEPKPATPIPVAEAKRARRLPLWSLPV AAVVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAPLPEAPVIIAAIPKDALVM DSTQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCT DGSRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA >Mature_440_residues AKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVDWYSPIEGQAIAWKAADEETRS RALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKATQFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRITE AIPDIPLVEPEPEPEEKPLVEAAFSQADEPLLTSVIEPPKMPEEPVAPPVIVSEPKPATPIPVAEAKRARRLPLWSLPVA AVVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKAAPLPEAPVIIAAIPKDALVMD STQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQNNKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTD GSRYPMPEITCKAGVNDVATCTARYGDHAAIPLTFKKIGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47600; Mature: 47469
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVD CCHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE WYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKAT CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRITEAIPDIPLVEPEPEPEEKPL HCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH VEAAFSQADEPLLTSVIEPPKMPEEPVAPPVIVSEPKPATPIPVAEAKRARRLPLWSLPV HHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCHHHH AAVVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC APLPEAPVIIAAIPKDALVMDSTQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQN CCCCCCCEEEEECCCCCEEECCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEC NKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGSRYPMPEITCKAGVNDVA CCCEEEEEECCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEHHCCCCHHH TCTARYGDHAAIPLTFKKIGA HHHHHCCCCEEEEEEHHHHCC >Mature Secondary Structure AKSLLRSGNLDDYQAVGGGGQAVFESALQIRETLRLRKQQAMVDCLAIPQLNDNGDRVD CHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE WYSPIEGQAIAWKAADEETRSRALRYLASTFESAAALSRKSLQSGKTALQLFGSLLEKAT CCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH QFPGENHVFLVNGKPVITFWGFVNLNENTRDDVLDCLRITEAIPDIPLVEPEPEPEEKPL HCCCCCCEEEECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHH VEAAFSQADEPLLTSVIEPPKMPEEPVAPPVIVSEPKPATPIPVAEAKRARRLPLWSLPV HHHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCCHHHH AAVVIAAVATPFFWPSSSVDGASPVRAAPVATAKTDVTPLPELTAHLPLHRAEVTPAPKA HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC APLPEAPVIIAAIPKDALVMDSTQMKLGTTRFLNGSWRVSVDVKDPITGKPPSLRYQIQN CCCCCCCEEEEECCCCCEEECCCCCCCCCEEEECCCEEEEEEECCCCCCCCCCEEEEEEC NKGIARVVHGDNVVCRAEIFSGLHQTGELMIKSRGNARCTDGSRYPMPEITCKAGVNDVA CCCEEEEEECCCEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCEEHHCCCCHHH TCTARYGDHAAIPLTFKKIGA HHHHHCCCCEEEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA