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The map label for this gene is ttuB [H]

Identifier: 194734011

GI number: 194734011

Start: 2383752

End: 2385077

Strand: Reverse

Name: ttuB [H]

Synonym: SeSA_A2500

Alternate gene names: 194734011

Gene position: 2385077-2383752 (Counterclockwise)

Preceding gene: 194737051

Following gene: 194735769

Centisome position: 50.65

GC content: 42.08

Gene sequence:

>1326_bases
ATGAGTAGTCCACAAGAAAATTTATACGATGCAATTCGTATTGTAAAAAGGAAAATCATTCCTTTGGCCTTTATTCTTTA
CTTTTTTAACTATATGGATCGTGTCAATATTGGGTTTGCTGCATTACGCATGAATGAATCTCTTGGTATTACGCCTGAGG
ATTTCGCTAATATTTCTTCTATATTCTTCATATCATATTTAATCTTTCAAATTCCGAGTAGCATTGGCTTGCAAAAGCTT
GGCGCAAGAAAATGGATTAGTTCCATTATTATCGGCTGGGGAGCGGTAACTGGGCTGATTTTTTTTGCTAAAGATACTCA
ACATATTTTGCTGGCTCGCATTTTTTTGGGGGTATTTGAAGCTGGCTTTTTCCCGGGCATGGTTTATTATCTTGCATGCT
GGTTCCCGGCTCGTGAACGCGGAAAAGTCAATAGTTTCTTCATGTTATCTATTGCTGTTGCATCGGTATTGGCTGCACCG
ATGTCTGGTTGGATCATCGAGCATTTGAATACCCCGGATTATGAAGGCTGGCGCTGGCTTTTTGCTATTGAAGGTATCCC
AACCGTATTCCTTGGCATCCTGACATTTTATTTACTGCCTGACAGTCCAGAAAAGGCTAAATGGCTTACGCCACAGCAGA
TATCGGCCTTAGTTAATAAATTACGCACTGACAATGAAACCGCAGCTGCATTAAATAAAAATACCAACTCATCCTTTCTT
TCCGTAATCAAAAATCCAGTTTTGCTTCAGCTTTCTTTCGCCTACATGTTGATTCAGGCGGCTGCTCTGGCGGCAAACTA
CTGGTTGCCGGGGTTGGTGAAGGGATTTTCAGCTGATTTTACGGATACTGACGTTGGTTTAATCATGAGTATTCCGTTTA
TTTTCGCTATGTTCAGCATGCCCTGGTGGGGCTGGCATTCCGATAAAAAGAATGAACGAAAATGGCATGCTGCATTACCC
ATGTTTCTGGCGGGCTGTGGTTTTCTGATGATTGCTCTTGTCCCCTCAATGTCGTTGAGAATGCTGGGGCTAACGTTCTA
TGGTGTTGGGATCCTCAGCTATTACGGACCTTACTGGGCGCTGCCTTCTGCATTATTGTCGCCGTCAGGGTTGGCTATCA
GCATTGCGTTTATTAACTCATGTTCAAGTCTTGGCGGATTCCTGATTAATAAATCACTGGGATTCGTTTCTACTCATTAT
GGTGCGACAGGAATATTTATTGTAGAGGCAATACTTTGCTTCGCTGCGGTAGCCGTTCTGGCGTTAATGAAAATTGATGT
GAAAAAAGAAAAAAGCCAACAAACAAATGTTGTATCACGAACCTGA

Upstream 100 bases:

>100_bases
TATTAGATATGACACATTAGCTTTTGAATTGTATTGTTTTTTACGTAACATCGATTCCGGTCAATACCCTTATTCATTGA
ATCATAAAAGGTGATGCAAA

Downstream 100 bases:

>100_bases
AAAATGGAGAAATTATGAAAATTACGTCTATTGAAGTTTTTGACTGTGAATTAAAAAAAAGAGATCAAACGATGTCCTCC
TATAATCCAGTACTTATTCG

Product: putative permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 441; Mature: 440

Protein sequence:

>441_residues
MSSPQENLYDAIRIVKRKIIPLAFILYFFNYMDRVNIGFAALRMNESLGITPEDFANISSIFFISYLIFQIPSSIGLQKL
GARKWISSIIIGWGAVTGLIFFAKDTQHILLARIFLGVFEAGFFPGMVYYLACWFPARERGKVNSFFMLSIAVASVLAAP
MSGWIIEHLNTPDYEGWRWLFAIEGIPTVFLGILTFYLLPDSPEKAKWLTPQQISALVNKLRTDNETAAALNKNTNSSFL
SVIKNPVLLQLSFAYMLIQAAALAANYWLPGLVKGFSADFTDTDVGLIMSIPFIFAMFSMPWWGWHSDKKNERKWHAALP
MFLAGCGFLMIALVPSMSLRMLGLTFYGVGILSYYGPYWALPSALLSPSGLAISIAFINSCSSLGGFLINKSLGFVSTHY
GATGIFIVEAILCFAAVAVLALMKIDVKKEKSQQTNVVSRT

Sequences:

>Translated_441_residues
MSSPQENLYDAIRIVKRKIIPLAFILYFFNYMDRVNIGFAALRMNESLGITPEDFANISSIFFISYLIFQIPSSIGLQKL
GARKWISSIIIGWGAVTGLIFFAKDTQHILLARIFLGVFEAGFFPGMVYYLACWFPARERGKVNSFFMLSIAVASVLAAP
MSGWIIEHLNTPDYEGWRWLFAIEGIPTVFLGILTFYLLPDSPEKAKWLTPQQISALVNKLRTDNETAAALNKNTNSSFL
SVIKNPVLLQLSFAYMLIQAAALAANYWLPGLVKGFSADFTDTDVGLIMSIPFIFAMFSMPWWGWHSDKKNERKWHAALP
MFLAGCGFLMIALVPSMSLRMLGLTFYGVGILSYYGPYWALPSALLSPSGLAISIAFINSCSSLGGFLINKSLGFVSTHY
GATGIFIVEAILCFAAVAVLALMKIDVKKEKSQQTNVVSRT
>Mature_440_residues
SSPQENLYDAIRIVKRKIIPLAFILYFFNYMDRVNIGFAALRMNESLGITPEDFANISSIFFISYLIFQIPSSIGLQKLG
ARKWISSIIIGWGAVTGLIFFAKDTQHILLARIFLGVFEAGFFPGMVYYLACWFPARERGKVNSFFMLSIAVASVLAAPM
SGWIIEHLNTPDYEGWRWLFAIEGIPTVFLGILTFYLLPDSPEKAKWLTPQQISALVNKLRTDNETAAALNKNTNSSFLS
VIKNPVLLQLSFAYMLIQAAALAANYWLPGLVKGFSADFTDTDVGLIMSIPFIFAMFSMPWWGWHSDKKNERKWHAALPM
FLAGCGFLMIALVPSMSLRMLGLTFYGVGILSYYGPYWALPSALLSPSGLAISIAFINSCSSLGGFLINKSLGFVSTHYG
ATGIFIVEAILCFAAVAVLALMKIDVKKEKSQQTNVVSRT

Specific function: Component of the tartrate utilization system and may allow entry of tartrate and tartrate dehydrogenase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Escherichia coli, GI87082071, Length=383, Percent_Identity=31.8537859007833, Blast_Score=213, Evalue=2e-56,
Organism=Escherichia coli, GI87082320, Length=438, Percent_Identity=22.1461187214612, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI2367379, Length=310, Percent_Identity=24.8387096774194, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI1789152, Length=170, Percent_Identity=32.9411764705882, Blast_Score=71, Evalue=1e-13,
Organism=Escherichia coli, GI1789515, Length=290, Percent_Identity=25.8620689655172, Blast_Score=64, Evalue=2e-11,
Organism=Saccharomyces cerevisiae, GI6319876, Length=208, Percent_Identity=27.8846153846154, Blast_Score=85, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319250, Length=210, Percent_Identity=28.0952380952381, Blast_Score=84, Evalue=6e-17,
Organism=Saccharomyces cerevisiae, GI6322612, Length=234, Percent_Identity=25.6410256410256, Blast_Score=77, Evalue=7e-15,
Organism=Saccharomyces cerevisiae, GI6322025, Length=248, Percent_Identity=23.3870967741935, Blast_Score=75, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6323032, Length=227, Percent_Identity=23.7885462555066, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6321502, Length=178, Percent_Identity=26.4044943820225, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 48973; Mature: 48842

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSPQENLYDAIRIVKRKIIPLAFILYFFNYMDRVNIGFAALRMNESLGITPEDFANISS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
IFFISYLIFQIPSSIGLQKLGARKWISSIIIGWGAVTGLIFFAKDTQHILLARIFLGVFE
HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
AGFFPGMVYYLACWFPARERGKVNSFFMLSIAVASVLAAPMSGWIIEHLNTPDYEGWRWL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEE
FAIEGIPTVFLGILTFYLLPDSPEKAKWLTPQQISALVNKLRTDNETAAALNKNTNSSFL
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHH
SVIKNPVLLQLSFAYMLIQAAALAANYWLPGLVKGFSADFTDTDVGLIMSIPFIFAMFSM
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PWWGWHSDKKNERKWHAALPMFLAGCGFLMIALVPSMSLRMLGLTFYGVGILSYYGPYWA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH
LPSALLSPSGLAISIAFINSCSSLGGFLINKSLGFVSTHYGATGIFIVEAILCFAAVAVL
CHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
ALMKIDVKKEKSQQTNVVSRT
HHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SSPQENLYDAIRIVKRKIIPLAFILYFFNYMDRVNIGFAALRMNESLGITPEDFANISS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHH
IFFISYLIFQIPSSIGLQKLGARKWISSIIIGWGAVTGLIFFAKDTQHILLARIFLGVFE
HHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHH
AGFFPGMVYYLACWFPARERGKVNSFFMLSIAVASVLAAPMSGWIIEHLNTPDYEGWRWL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCEEEE
FAIEGIPTVFLGILTFYLLPDSPEKAKWLTPQQISALVNKLRTDNETAAALNKNTNSSFL
EEECCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCHHHH
SVIKNPVLLQLSFAYMLIQAAALAANYWLPGLVKGFSADFTDTDVGLIMSIPFIFAMFSM
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCC
PWWGWHSDKKNERKWHAALPMFLAGCGFLMIALVPSMSLRMLGLTFYGVGILSYYGPYWA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH
LPSALLSPSGLAISIAFINSCSSLGGFLINKSLGFVSTHYGATGIFIVEAILCFAAVAVL
CHHHHCCCCCCEEEEHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHHHHHHHHHH
ALMKIDVKKEKSQQTNVVSRT
HHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7592429 [H]