Definition | Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633 chromosome, complete genome. |
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Accession | NC_011094 |
Length | 4,709,075 |
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The map label for this gene is dpiA [H]
Identifier: 194733943
GI number: 194733943
Start: 762983
End: 763663
Strand: Direct
Name: dpiA [H]
Synonym: SeSA_A0785
Alternate gene names: 194733943
Gene position: 762983-763663 (Clockwise)
Preceding gene: 194737782
Following gene: 194736997
Centisome position: 16.2
GC content: 53.45
Gene sequence:
>681_bases ATGACAGAACCATTAACCCTATTGATCGTTGAGGATGAAACGCTGCTGGCGGAGATGCACGCAGAATATATCCGCCATAT TCCTGGCTTTAAGCAGATATGGCTGGCGGGCAATCTGGCGCAGGCGAGAATGATGATTGACCGGTTCAAACCTGGATTAA TTCTGTTGGATAATTATCTGCCGGATGGGAAGGGGATTACGCTGCTGCATGAATTAATGCAGTCGCGCTATCCCGGCGGC GTCGTGTTTACGACCGCCGCCAGTGACATGGAGACGGTAGCGGAAGCGGTACGTAGCGGCGCGTTTGATTATCTGGTCAA ACCTATTGCTTATGAACGTTTGGGACAGACGCTGACCCGCTATCAACAGCGCAGACGTATGCTGGCGAGCGCGGATAGCG CAAGCCAGAAGCAGATAGATGAAATGTTCAACGCCTATGCGCGCGGCGAACCGAAAGGGGATTTGCCGACCGGTATTGAT GCCTTAACCCTTAATGCGGTGATGAAGCTGTTTGCCGATCCAACCGTACGCCACACGGCTGAAACGGTCGCGCAGGCCTT AACAATAAGCCGCACCACATCCCGACGCTACCTGGAATATTGCGCGAGTCAGCACCTGATTGTCGCAGAGATTATTCATG GCAAAGTGGGCAGGCCGCAGCGTATTTACCACGGCGGCTAA
Upstream 100 bases:
>100_bases GCAAGTTATGTGGGGCGCTGTGGCGGGGTCATTACGCTGGAAGACAATGATCCTTGTGGCACCTTATTTTCTTTATTCCT TCCGAAAGTGAAAAAAAACG
Downstream 100 bases:
>100_bases GCTTGGTTTAAGATGCCGGGGCGACGTTTTCCCTCGCCCCGGCTTACTGGCTATCAGCCGCCAGTAACGGCGGAAGAGGC GCCTGGCACCATAATTTCCG
Product: two-component response regulator DpiA
Products: NA
Alternate protein names: Destabilizer of plasmid inheritance [H]
Number of amino acids: Translated: 226; Mature: 225
Protein sequence:
>226_residues MTEPLTLLIVEDETLLAEMHAEYIRHIPGFKQIWLAGNLAQARMMIDRFKPGLILLDNYLPDGKGITLLHELMQSRYPGG VVFTTAASDMETVAEAVRSGAFDYLVKPIAYERLGQTLTRYQQRRRMLASADSASQKQIDEMFNAYARGEPKGDLPTGID ALTLNAVMKLFADPTVRHTAETVAQALTISRTTSRRYLEYCASQHLIVAEIIHGKVGRPQRIYHGG
Sequences:
>Translated_226_residues MTEPLTLLIVEDETLLAEMHAEYIRHIPGFKQIWLAGNLAQARMMIDRFKPGLILLDNYLPDGKGITLLHELMQSRYPGG VVFTTAASDMETVAEAVRSGAFDYLVKPIAYERLGQTLTRYQQRRRMLASADSASQKQIDEMFNAYARGEPKGDLPTGID ALTLNAVMKLFADPTVRHTAETVAQALTISRTTSRRYLEYCASQHLIVAEIIHGKVGRPQRIYHGG >Mature_225_residues TEPLTLLIVEDETLLAEMHAEYIRHIPGFKQIWLAGNLAQARMMIDRFKPGLILLDNYLPDGKGITLLHELMQSRYPGGV VFTTAASDMETVAEAVRSGAFDYLVKPIAYERLGQTLTRYQQRRRMLASADSASQKQIDEMFNAYARGEPKGDLPTGIDA LTLNAVMKLFADPTVRHTAETVAQALTISRTTSRRYLEYCASQHLIVAEIIHGKVGRPQRIYHGG
Specific function: Member of the two-component regulatory system DpiA/DpiB, which is essential for expression of citrate-specific fermentation genes and genes involved in plasmid inheritance. Could be involved in response to both the presence of citrate and external redox c
COG id: COG4565
COG function: function code KT; Response regulator of citrate/malate metabolism
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI1786838, Length=226, Percent_Identity=84.9557522123894, Blast_Score=402, Evalue=1e-114, Organism=Escherichia coli, GI1790566, Length=220, Percent_Identity=29.0909090909091, Blast_Score=109, Evalue=2e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 25293; Mature: 25161
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPLTLLIVEDETLLAEMHAEYIRHIPGFKQIWLAGNLAQARMMIDRFKPGLILLDNYL CCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCC PDGKGITLLHELMQSRYPGGVVFTTAASDMETVAEAVRSGAFDYLVKPIAYERLGQTLTR CCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YQQRRRMLASADSASQKQIDEMFNAYARGEPKGDLPTGIDALTLNAVMKLFADPTVRHTA HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH ETVAQALTISRTTSRRYLEYCASQHLIVAEIIHGKVGRPQRIYHGG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TEPLTLLIVEDETLLAEMHAEYIRHIPGFKQIWLAGNLAQARMMIDRFKPGLILLDNYL CCCEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCC PDGKGITLLHELMQSRYPGGVVFTTAASDMETVAEAVRSGAFDYLVKPIAYERLGQTLTR CCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH YQQRRRMLASADSASQKQIDEMFNAYARGEPKGDLPTGIDALTLNAVMKLFADPTVRHTA HHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHH ETVAQALTISRTTSRRYLEYCASQHLIVAEIIHGKVGRPQRIYHGG HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]