Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
---|---|
Accession | NC_011059 |
Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194334621
Identifier: 194334621
GI number: 194334621
Start: 1986802
End: 1987440
Strand: Reverse
Name: 194334621
Synonym: Paes_1822
Alternate gene names: NA
Gene position: 1987440-1986802 (Counterclockwise)
Preceding gene: 194334622
Following gene: 194334620
Centisome position: 79.09
GC content: 48.67
Gene sequence:
>639_bases ATGAGCGATCCTGTATCGAAATTTCTCAAGCAACATGACCGTGATGCTATCGGCGAGCGAGTCCGGCTGGCTGAAGAACG GACATCGGGAGAGATTGTTGTCATGGTTGTTGCTTCCAGCCACCACTATCCTTTAGCAAATATTATCGGAGGGGTTCTGG CTGGCCTTCTTGCCGCAGTCGTGACGGCCTTGCTTACCGGAAGAGAGCATATGTGGGATTTTCTCGGGTTTTTTCTGCTG TTTTTCATACTCTTCAATGAACTTTTCAGGCGGGTCTGGTTCCTGAAAAAGCTGTTCGTTAGGCCGGGAGACATGGATGA AGAGGTTGAAGAGACCGCTATTGCATCGTTTTACAAAAAAGAGGTTTACAATACCCGTGACCACAGTGGTATTTTGCTCT ATATTTCGCTGTTCGAACACCGGGTACGGGTTGTGGCCGATAAGGGGATCAGTGCCGTTGTCAGTCAGGCGGAATGGGAT ACCATCGTTCAGCGCATTATTCAGGCAATACGAACCGGAAAGCAGGCGGAGGCAATCATGGAAGCGGTAGACATGTGCGG AGATATACTCTCAAAGCATTTTCCTTCAAAGCCGGATGACACCAACGAACTTGACAACTCCGTCATTATCGGTCATTAA
Upstream 100 bases:
>100_bases GGTGGCGGCGGGAGTTTCGGAGGTGGTGGATCATCAGGCAACTGGTAATGCTCAAGCGCACGGTAACAAGCTCAATAACG CAACAAATCAACAGTTCTCT
Downstream 100 bases:
>100_bases CCAGCCTTCAGGACAGGAGGGGAATATGAAAAAACTCTGTAAAATCAACAGGAAAGAGATCCGGCAGTCAATGCCGTTTG TTCTTTCCGTTGTTGCCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MSDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAVVTALLTGREHMWDFLGFFLL FFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKKEVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWD TIVQRIIQAIRTGKQAEAIMEAVDMCGDILSKHFPSKPDDTNELDNSVIIGH
Sequences:
>Translated_212_residues MSDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAVVTALLTGREHMWDFLGFFLL FFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKKEVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWD TIVQRIIQAIRTGKQAEAIMEAVDMCGDILSKHFPSKPDDTNELDNSVIIGH >Mature_211_residues SDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAVVTALLTGREHMWDFLGFFLLF FILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKKEVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWDT IVQRIIQAIRTGKQAEAIMEAVDMCGDILSKHFPSKPDDTNELDNSVIIGH
Specific function: Unknown
COG id: COG3762
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23976; Mature: 23845
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAV CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH VTALLTGREHMWDFLGFFLLFFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKK HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWDTIVQRIIQAIRTGKQAEAIM HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EAVDMCGDILSKHFPSKPDDTNELDNSVIIGH HHHHHHHHHHHHHCCCCCCCCHHHCCCEECCC >Mature Secondary Structure SDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH VTALLTGREHMWDFLGFFLLFFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKK HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH EVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWDTIVQRIIQAIRTGKQAEAIM HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH EAVDMCGDILSKHFPSKPDDTNELDNSVIIGH HHHHHHHHHHHHHCCCCCCCCHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA