Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194334621

Identifier: 194334621

GI number: 194334621

Start: 1986802

End: 1987440

Strand: Reverse

Name: 194334621

Synonym: Paes_1822

Alternate gene names: NA

Gene position: 1987440-1986802 (Counterclockwise)

Preceding gene: 194334622

Following gene: 194334620

Centisome position: 79.09

GC content: 48.67

Gene sequence:

>639_bases
ATGAGCGATCCTGTATCGAAATTTCTCAAGCAACATGACCGTGATGCTATCGGCGAGCGAGTCCGGCTGGCTGAAGAACG
GACATCGGGAGAGATTGTTGTCATGGTTGTTGCTTCCAGCCACCACTATCCTTTAGCAAATATTATCGGAGGGGTTCTGG
CTGGCCTTCTTGCCGCAGTCGTGACGGCCTTGCTTACCGGAAGAGAGCATATGTGGGATTTTCTCGGGTTTTTTCTGCTG
TTTTTCATACTCTTCAATGAACTTTTCAGGCGGGTCTGGTTCCTGAAAAAGCTGTTCGTTAGGCCGGGAGACATGGATGA
AGAGGTTGAAGAGACCGCTATTGCATCGTTTTACAAAAAAGAGGTTTACAATACCCGTGACCACAGTGGTATTTTGCTCT
ATATTTCGCTGTTCGAACACCGGGTACGGGTTGTGGCCGATAAGGGGATCAGTGCCGTTGTCAGTCAGGCGGAATGGGAT
ACCATCGTTCAGCGCATTATTCAGGCAATACGAACCGGAAAGCAGGCGGAGGCAATCATGGAAGCGGTAGACATGTGCGG
AGATATACTCTCAAAGCATTTTCCTTCAAAGCCGGATGACACCAACGAACTTGACAACTCCGTCATTATCGGTCATTAA

Upstream 100 bases:

>100_bases
GGTGGCGGCGGGAGTTTCGGAGGTGGTGGATCATCAGGCAACTGGTAATGCTCAAGCGCACGGTAACAAGCTCAATAACG
CAACAAATCAACAGTTCTCT

Downstream 100 bases:

>100_bases
CCAGCCTTCAGGACAGGAGGGGAATATGAAAAAACTCTGTAAAATCAACAGGAAAGAGATCCGGCAGTCAATGCCGTTTG
TTCTTTCCGTTGTTGCCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAVVTALLTGREHMWDFLGFFLL
FFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKKEVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWD
TIVQRIIQAIRTGKQAEAIMEAVDMCGDILSKHFPSKPDDTNELDNSVIIGH

Sequences:

>Translated_212_residues
MSDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAVVTALLTGREHMWDFLGFFLL
FFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKKEVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWD
TIVQRIIQAIRTGKQAEAIMEAVDMCGDILSKHFPSKPDDTNELDNSVIIGH
>Mature_211_residues
SDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAVVTALLTGREHMWDFLGFFLLF
FILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKKEVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWDT
IVQRIIQAIRTGKQAEAIMEAVDMCGDILSKHFPSKPDDTNELDNSVIIGH

Specific function: Unknown

COG id: COG3762

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23976; Mature: 23845

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
VTALLTGREHMWDFLGFFLLFFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWDTIVQRIIQAIRTGKQAEAIM
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EAVDMCGDILSKHFPSKPDDTNELDNSVIIGH
HHHHHHHHHHHHHCCCCCCCCHHHCCCEECCC
>Mature Secondary Structure 
SDPVSKFLKQHDRDAIGERVRLAEERTSGEIVVMVVASSHHYPLANIIGGVLAGLLAAV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHH
VTALLTGREHMWDFLGFFLLFFILFNELFRRVWFLKKLFVRPGDMDEEVEETAIASFYKK
HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EVYNTRDHSGILLYISLFEHRVRVVADKGISAVVSQAEWDTIVQRIIQAIRTGKQAEAIM
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
EAVDMCGDILSKHFPSKPDDTNELDNSVIIGH
HHHHHHHHHHHHHCCCCCCCCHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA