Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194334567
Identifier: 194334567
GI number: 194334567
Start: 1926752
End: 1928095
Strand: Reverse
Name: 194334567
Synonym: Paes_1767
Alternate gene names: NA
Gene position: 1928095-1926752 (Counterclockwise)
Preceding gene: 194334568
Following gene: 194334566
Centisome position: 76.73
GC content: 43.08
Gene sequence:
>1344_bases ATGGAAAAAGTAGTTGAGTTTATATTGAACAGGTTTCCATCGGTTAGGGACAGGATTGATGTGCATATGATGGAGGTGAT TAATGGGGCGGCGGTTGCTCTTGTGCTGAAGGTTCTTGGAGCGGGGTTGACTTTTCTGTTCAATTTAGTGCTCGCAAGAA CTCTTGGGGCCGATGGGGCGGGTCACTACTTCCTGGCGCTCACTGTAACGACAATTGCTACGGTTTTCGGGCGCATGGGG CTCGATAATACGCTGCTGCGCTTTACTGCTGCAAATGCAGCTGTCAATGACTGGGTAGCAGTTAAGGGTGCTTATGTGAA AGGAATGAAACTGGCATTCATTGCCTCATCCCTTTCTACAGTTGCGGTGTTTGTTTTTGCCCCGGTTCTGGCGGACAAGG TTTTTCAAAAGCCTGAACTTTCAATTCCAATGCGCTGGATGTCAGTGGCTGTAGTTCCGATGACTTTTGTCATGTTGCAT GCAGAGGGACTTAAAGGGCTAAAGCGGATCAGGGATTCGTTTATTGTTTTTGGTGTGGGTGTTCCTGCGATTTCATTGAC AGTTCTCTTGTTGTTTGGTGCAAGGTATGGCGTTAATGGAGCGATTTGGGCATATGCGTCAGGTGCGATATTCACTTCGT TATTAGGTGTTATTCTCTGGAACATTGCAACGCCTAAGTTGCGGAAAGTGTCTGGTGTTTTTCGAACAAACGATTTGTTC AAGAGCAGCATGCCGCTTTTCTGGATTGCTTCGTTGAGCATGATGATTAATTGGACAGCTACATTTGCTCTTGGTGTATG GGGTACACAGGAGGATGTTGGGATATTCAGTATGGCTTCAAGAACAGCTATGCTAACAAGTCTCATTTTGACATCAGTTA ACAGTATATCGGCTCCCAAATTTGCTGAATTGTATAAGAAAAAAGAAATAGCTGCATTGGGGGCGACTGCAAGAAATACA GCTAAACTGATGACAATTATTGCCAGTCCATTGTTATTGCTCTTTCTAGTTGCGCCACAGTGGGTAATGGGGATGTTTGG TGAAGAATTTCCAAAAGGCGGTATTCTACTGTCGATTCTTGCAATTGGCCAGTTTGTCAATGTTGTAACGGGTTCTGTTG GATATTTACTGATAATGAGTGGGAATGAAAAAGATATGAGAAATACAGTTGTTGTTGTTTCAGGTATCAGTGTATTACTA AACGTGATTTTAGTGAAAGAATTTGGCCTAATAGGCGCTGCAATTGCTACAGCAACTTGTTTTTCGATGCAAAATATTAT TGCAACATATATTGTCTGGAGAAAGCTAAAGATATTAACAACGCCGTTATGGTATAAGGCATAG
Upstream 100 bases:
>100_bases AATAGTTTGCCATCTTAAAATATCACTAAGAACTATTCTGCTATATGGTTATCAAGCTATTCAACAACGTACTGTAATGT CTATCCTCTAACCCACCTTC
Downstream 100 bases:
>100_bases AGGTTGTTATAATAATAAATATTATGATAGATAAAAGACCAAATTTTTTATTAGTCGGTGCACCTAAGGCCGGGACTACA TCTATAGCTAAATATTTAGG
Product: polysaccharide biosynthesis protein
Products: NA
Alternate protein names: Polysaccharide Efflux Transporter; Polysaccharide Biosynthesis Related Protein; Polysaccharide Biosynthesis-Like Protein; Heteropolysaccharide Repeat-Containing Protein; Capsular Polysaccharide Biosynthesis Protein; Polysaccharide Export Protein Translocase; MatE Family; Cell Surface Polysaccharide Transporter; Multi Antimicrobial Extrusion Protein MatE; EpsJ Protein; Polysaccharide Biosynthesis Associated Protein; Lipopolysaccharide Biosynthesis Protein
Number of amino acids: Translated: 447; Mature: 447
Protein sequence:
>447_residues MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGAGHYFLALTVTTIATVFGRMG LDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLSTVAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLH AEGLKGLKRIRDSFIVFGVGVPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPKFAELYKKKEIAALGATARNT AKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSILAIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLL NVILVKEFGLIGAAIATATCFSMQNIIATYIVWRKLKILTTPLWYKA
Sequences:
>Translated_447_residues MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGAGHYFLALTVTTIATVFGRMG LDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLSTVAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLH AEGLKGLKRIRDSFIVFGVGVPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPKFAELYKKKEIAALGATARNT AKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSILAIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLL NVILVKEFGLIGAAIATATCFSMQNIIATYIVWRKLKILTTPLWYKA >Mature_447_residues MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGAGHYFLALTVTTIATVFGRMG LDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLSTVAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLH AEGLKGLKRIRDSFIVFGVGVPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPKFAELYKKKEIAALGATARNT AKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSILAIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLL NVILVKEFGLIGAAIATATCFSMQNIIATYIVWRKLKILTTPLWYKA
Specific function: Unknown
COG id: COG2244
COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48387; Mature: 48387
Theoretical pI: Translated: 10.59; Mature: 10.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GHYFLALTVTTIATVFGRMGLDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLST CCEEHHHHHHHHHHHHHHCCCCCHHHHEEECCHHHHHHHEECCHHHCCHHHHHHHHHHHH VAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLHAEGLKGLKRIRDSFIVFGVG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC VPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF CHHHHHHHHHHHHHHCCCCCEEEHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPK HHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH FAELYKKKEIAALGATARNTAKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLLNVILVKEFGLIGAAIATATC HHHHHHHHHHCCCCEEEEECCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH FSMQNIIATYIVWRKLKILTTPLWYKA HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGA CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GHYFLALTVTTIATVFGRMGLDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLST CCEEHHHHHHHHHHHHHHCCCCCHHHHEEECCHHHHHHHEECCHHHCCHHHHHHHHHHHH VAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLHAEGLKGLKRIRDSFIVFGVG HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC VPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF CHHHHHHHHHHHHHHCCCCCEEEHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPK HHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH FAELYKKKEIAALGATARNTAKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSIL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH AIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLLNVILVKEFGLIGAAIATATC HHHHHHHHHHCCCCEEEEECCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH FSMQNIIATYIVWRKLKILTTPLWYKA HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA