Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

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The map label for this gene is 194334567

Identifier: 194334567

GI number: 194334567

Start: 1926752

End: 1928095

Strand: Reverse

Name: 194334567

Synonym: Paes_1767

Alternate gene names: NA

Gene position: 1928095-1926752 (Counterclockwise)

Preceding gene: 194334568

Following gene: 194334566

Centisome position: 76.73

GC content: 43.08

Gene sequence:

>1344_bases
ATGGAAAAAGTAGTTGAGTTTATATTGAACAGGTTTCCATCGGTTAGGGACAGGATTGATGTGCATATGATGGAGGTGAT
TAATGGGGCGGCGGTTGCTCTTGTGCTGAAGGTTCTTGGAGCGGGGTTGACTTTTCTGTTCAATTTAGTGCTCGCAAGAA
CTCTTGGGGCCGATGGGGCGGGTCACTACTTCCTGGCGCTCACTGTAACGACAATTGCTACGGTTTTCGGGCGCATGGGG
CTCGATAATACGCTGCTGCGCTTTACTGCTGCAAATGCAGCTGTCAATGACTGGGTAGCAGTTAAGGGTGCTTATGTGAA
AGGAATGAAACTGGCATTCATTGCCTCATCCCTTTCTACAGTTGCGGTGTTTGTTTTTGCCCCGGTTCTGGCGGACAAGG
TTTTTCAAAAGCCTGAACTTTCAATTCCAATGCGCTGGATGTCAGTGGCTGTAGTTCCGATGACTTTTGTCATGTTGCAT
GCAGAGGGACTTAAAGGGCTAAAGCGGATCAGGGATTCGTTTATTGTTTTTGGTGTGGGTGTTCCTGCGATTTCATTGAC
AGTTCTCTTGTTGTTTGGTGCAAGGTATGGCGTTAATGGAGCGATTTGGGCATATGCGTCAGGTGCGATATTCACTTCGT
TATTAGGTGTTATTCTCTGGAACATTGCAACGCCTAAGTTGCGGAAAGTGTCTGGTGTTTTTCGAACAAACGATTTGTTC
AAGAGCAGCATGCCGCTTTTCTGGATTGCTTCGTTGAGCATGATGATTAATTGGACAGCTACATTTGCTCTTGGTGTATG
GGGTACACAGGAGGATGTTGGGATATTCAGTATGGCTTCAAGAACAGCTATGCTAACAAGTCTCATTTTGACATCAGTTA
ACAGTATATCGGCTCCCAAATTTGCTGAATTGTATAAGAAAAAAGAAATAGCTGCATTGGGGGCGACTGCAAGAAATACA
GCTAAACTGATGACAATTATTGCCAGTCCATTGTTATTGCTCTTTCTAGTTGCGCCACAGTGGGTAATGGGGATGTTTGG
TGAAGAATTTCCAAAAGGCGGTATTCTACTGTCGATTCTTGCAATTGGCCAGTTTGTCAATGTTGTAACGGGTTCTGTTG
GATATTTACTGATAATGAGTGGGAATGAAAAAGATATGAGAAATACAGTTGTTGTTGTTTCAGGTATCAGTGTATTACTA
AACGTGATTTTAGTGAAAGAATTTGGCCTAATAGGCGCTGCAATTGCTACAGCAACTTGTTTTTCGATGCAAAATATTAT
TGCAACATATATTGTCTGGAGAAAGCTAAAGATATTAACAACGCCGTTATGGTATAAGGCATAG

Upstream 100 bases:

>100_bases
AATAGTTTGCCATCTTAAAATATCACTAAGAACTATTCTGCTATATGGTTATCAAGCTATTCAACAACGTACTGTAATGT
CTATCCTCTAACCCACCTTC

Downstream 100 bases:

>100_bases
AGGTTGTTATAATAATAAATATTATGATAGATAAAAGACCAAATTTTTTATTAGTCGGTGCACCTAAGGCCGGGACTACA
TCTATAGCTAAATATTTAGG

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Polysaccharide Efflux Transporter; Polysaccharide Biosynthesis Related Protein; Polysaccharide Biosynthesis-Like Protein; Heteropolysaccharide Repeat-Containing Protein; Capsular Polysaccharide Biosynthesis Protein; Polysaccharide Export Protein Translocase; MatE Family; Cell Surface Polysaccharide Transporter; Multi Antimicrobial Extrusion Protein MatE; EpsJ Protein; Polysaccharide Biosynthesis Associated Protein; Lipopolysaccharide Biosynthesis Protein

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGAGHYFLALTVTTIATVFGRMG
LDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLSTVAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLH
AEGLKGLKRIRDSFIVFGVGVPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF
KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPKFAELYKKKEIAALGATARNT
AKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSILAIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLL
NVILVKEFGLIGAAIATATCFSMQNIIATYIVWRKLKILTTPLWYKA

Sequences:

>Translated_447_residues
MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGAGHYFLALTVTTIATVFGRMG
LDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLSTVAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLH
AEGLKGLKRIRDSFIVFGVGVPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF
KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPKFAELYKKKEIAALGATARNT
AKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSILAIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLL
NVILVKEFGLIGAAIATATCFSMQNIIATYIVWRKLKILTTPLWYKA
>Mature_447_residues
MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGAGHYFLALTVTTIATVFGRMG
LDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLSTVAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLH
AEGLKGLKRIRDSFIVFGVGVPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF
KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPKFAELYKKKEIAALGATARNT
AKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSILAIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLL
NVILVKEFGLIGAAIATATCFSMQNIIATYIVWRKLKILTTPLWYKA

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48387; Mature: 48387

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGA
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHYFLALTVTTIATVFGRMGLDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLST
CCEEHHHHHHHHHHHHHHCCCCCHHHHEEECCHHHHHHHEECCHHHCCHHHHHHHHHHHH
VAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLHAEGLKGLKRIRDSFIVFGVG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
VPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF
CHHHHHHHHHHHHHHCCCCCEEEHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPK
HHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
FAELYKKKEIAALGATARNTAKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSIL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLLNVILVKEFGLIGAAIATATC
HHHHHHHHHHCCCCEEEEECCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSMQNIIATYIVWRKLKILTTPLWYKA
HHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MEKVVEFILNRFPSVRDRIDVHMMEVINGAAVALVLKVLGAGLTFLFNLVLARTLGADGA
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GHYFLALTVTTIATVFGRMGLDNTLLRFTAANAAVNDWVAVKGAYVKGMKLAFIASSLST
CCEEHHHHHHHHHHHHHHCCCCCHHHHEEECCHHHHHHHEECCHHHCCHHHHHHHHHHHH
VAVFVFAPVLADKVFQKPELSIPMRWMSVAVVPMTFVMLHAEGLKGLKRIRDSFIVFGVG
HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECC
VPAISLTVLLLFGARYGVNGAIWAYASGAIFTSLLGVILWNIATPKLRKVSGVFRTNDLF
CHHHHHHHHHHHHHHCCCCCEEEHEECHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KSSMPLFWIASLSMMINWTATFALGVWGTQEDVGIFSMASRTAMLTSLILTSVNSISAPK
HHCCCHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCH
FAELYKKKEIAALGATARNTAKLMTIIASPLLLLFLVAPQWVMGMFGEEFPKGGILLSIL
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AIGQFVNVVTGSVGYLLIMSGNEKDMRNTVVVVSGISVLLNVILVKEFGLIGAAIATATC
HHHHHHHHHHCCCCEEEEECCCCCCHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSMQNIIATYIVWRKLKILTTPLWYKA
HHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA