BacMap

Definition	Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession	NC_011059
Length	2,512,923

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The map label for this gene is ucpA [C]

Identifier: 194333567

GI number: 194333567

Start: 783136

End: 783867

Strand: Reverse

Name: ucpA [C]

Synonym: Paes_0733

Alternate gene names: 194333567

Gene position: 783867-783136 (Counterclockwise)

Preceding gene: 194333569

Following gene: 194333566

Centisome position: 31.19

GC content: 48.36

Gene sequence:

>732_bases
ATGAAAGAGATCATTATCATCACCGGTGCCGGCAAAGGGATCGGACGTGCCATAGCCATTGATTTTGCCCGCCGTGCAAA
AGAAAAAGAGCAGTGTAATCCCATACTCATCCTCTCTTCACGAACCAGAAGTGACCTTGAAAAGGTCGCAGAAATCTGTC
GTGATCTGGGAACAGAAACAGTGATAACTGAAACCGATATTGCTGACACAAAAGCCACACGAAACCTTATCGAGATGGTC
ATGGAACGGTTTGGCCACATTGACTGTCTTATCAACAATGCCGGTGTGGGAAGGTTCAAGTCGCTCTTCGAGATGACAGA
AGAGGATTTTGACGACACCATGAATATCAATGCGAAAGGAACATTTTTCCTGACCCAGAAGGTTTTTCCGATTATGGAGC
AACAGCGATCCGGCCATATCTTCTTCATCAGTTCAATCGCAGCCGAAACCGCCTTCAAGAGTTCGTCGGTATATTCCATG
TCAAAATTCGCGCAAAACGGTCTTATCGCCTCCCTCAGACTCTATGCCCGGGAGTGCAATGTTCGGGTTACCAATATCAT
GCCGGGAGCGGTCTACACCCCCATGTGGGGAGAGAGCGGCGAGCATTTTAAAAATGTCATGATGATGCCTGAAGACATTG
CCTCAGCGACCGTCGATGCCTACCTGCAACCAGGCAGAACATGCGTTGAAGAAATCGTTATCCGGCCGACAGGAGGCGAT
ATTAACAGCTGA

Upstream 100 bases:

>100_bases
CACAACAAAGCGCTCGCCTTTTTTTCAACACAATTACCGCATTTCCACGCACCACACTATCATTCAAAACACATAACCAT
CACCACCCGTCATTTTTTTC

Downstream 100 bases:

>100_bases
TCGCGGACTGACAGGGTCGCGGCACTACCTTTTACAGCCGAGGTCACGTACTTTTTGCCTTTTGACTTTACTCTTTTGAC
TTTATCTTGGCTGACAGCAA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKEIIIITGAGKGIGRAIAIDFARRAKEKEQCNPILILSSRTRSDLEKVAEICRDLGTETVITETDIADTKATRNLIEMV
MERFGHIDCLINNAGVGRFKSLFEMTEEDFDDTMNINAKGTFFLTQKVFPIMEQQRSGHIFFISSIAAETAFKSSSVYSM
SKFAQNGLIASLRLYARECNVRVTNIMPGAVYTPMWGESGEHFKNVMMMPEDIASATVDAYLQPGRTCVEEIVIRPTGGD
INS

Sequences:

>Translated_243_residues
MKEIIIITGAGKGIGRAIAIDFARRAKEKEQCNPILILSSRTRSDLEKVAEICRDLGTETVITETDIADTKATRNLIEMV
MERFGHIDCLINNAGVGRFKSLFEMTEEDFDDTMNINAKGTFFLTQKVFPIMEQQRSGHIFFISSIAAETAFKSSSVYSM
SKFAQNGLIASLRLYARECNVRVTNIMPGAVYTPMWGESGEHFKNVMMMPEDIASATVDAYLQPGRTCVEEIVIRPTGGD
INS
>Mature_243_residues
MKEIIIITGAGKGIGRAIAIDFARRAKEKEQCNPILILSSRTRSDLEKVAEICRDLGTETVITETDIADTKATRNLIEMV
MERFGHIDCLINNAGVGRFKSLFEMTEEDFDDTMNINAKGTFFLTQKVFPIMEQQRSGHIFFISSIAAETAFKSSSVYSM
SKFAQNGLIASLRLYARECNVRVTNIMPGAVYTPMWGESGEHFKNVMMMPEDIASATVDAYLQPGRTCVEEIVIRPTGGD
INS

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4504505, Length=230, Percent_Identity=27.3913043478261, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI32483357, Length=224, Percent_Identity=28.5714285714286, Blast_Score=88, Evalue=7e-18,
Organism=Homo sapiens, GI210032110, Length=166, Percent_Identity=29.5180722891566, Blast_Score=84, Evalue=8e-17,
Organism=Homo sapiens, GI142976729, Length=194, Percent_Identity=29.8969072164948, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI126723191, Length=182, Percent_Identity=30.7692307692308, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI31543615, Length=206, Percent_Identity=29.126213592233, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI7706318, Length=193, Percent_Identity=28.4974093264249, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI20149619, Length=200, Percent_Identity=29, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI7657478, Length=195, Percent_Identity=26.6666666666667, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI4503817, Length=202, Percent_Identity=29.2079207920792, Blast_Score=79, Evalue=3e-15,
Organism=Homo sapiens, GI33667109, Length=192, Percent_Identity=27.0833333333333, Blast_Score=78, Evalue=6e-15,
Organism=Homo sapiens, GI109715829, Length=253, Percent_Identity=24.901185770751, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI40807363, Length=198, Percent_Identity=26.7676767676768, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI5031737, Length=213, Percent_Identity=25.8215962441315, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI40254992, Length=208, Percent_Identity=28.8461538461538, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI15277342, Length=209, Percent_Identity=28.2296650717703, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI7705925, Length=192, Percent_Identity=29.1666666666667, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI38348362, Length=183, Percent_Identity=26.775956284153, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI223718074, Length=217, Percent_Identity=26.7281105990783, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI38424085, Length=183, Percent_Identity=26.775956284153, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI32455239, Length=183, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI5031765, Length=183, Percent_Identity=27.3224043715847, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI40254986, Length=168, Percent_Identity=26.7857142857143, Blast_Score=71, Evalue=7e-13,
Organism=Homo sapiens, GI310128830, Length=236, Percent_Identity=26.271186440678, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI310115468, Length=236, Percent_Identity=26.271186440678, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI59889578, Length=134, Percent_Identity=29.1044776119403, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI302344755, Length=106, Percent_Identity=38.6792452830189, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI126723750, Length=195, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI209862901, Length=204, Percent_Identity=26.9607843137255, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI19923983, Length=204, Percent_Identity=26.9607843137255, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI25282469, Length=222, Percent_Identity=27.027027027027, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI31542939, Length=198, Percent_Identity=27.7777777777778, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87082100, Length=191, Percent_Identity=35.0785340314136, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1787905, Length=188, Percent_Identity=33.5106382978723, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1787820, Length=244, Percent_Identity=25, Blast_Score=82, Evalue=2e-17,
Organism=Escherichia coli, GI1789208, Length=195, Percent_Identity=28.7179487179487, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1788459, Length=201, Percent_Identity=25.3731343283582, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787335, Length=196, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI87082160, Length=188, Percent_Identity=27.1276595744681, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI1790717, Length=191, Percent_Identity=25.130890052356, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786812, Length=191, Percent_Identity=27.2251308900524, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1789378, Length=197, Percent_Identity=27.9187817258883, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1787526, Length=196, Percent_Identity=28.0612244897959, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71994600, Length=228, Percent_Identity=30.7017543859649, Blast_Score=97, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI71994604, Length=201, Percent_Identity=29.8507462686567, Blast_Score=90, Evalue=9e-19,
Organism=Caenorhabditis elegans, GI17567345, Length=196, Percent_Identity=29.5918367346939, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17560676, Length=191, Percent_Identity=27.2251308900524, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17561402, Length=195, Percent_Identity=28.2051282051282, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI193203115, Length=224, Percent_Identity=25.4464285714286, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=229, Percent_Identity=26.2008733624454, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI193203117, Length=224, Percent_Identity=25.4464285714286, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17508895, Length=199, Percent_Identity=27.1356783919598, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17544670, Length=236, Percent_Identity=27.1186440677966, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17564282, Length=195, Percent_Identity=27.6923076923077, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=225, Percent_Identity=26.2222222222222, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI193204405, Length=207, Percent_Identity=29.4685990338164, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=235, Percent_Identity=28.5106382978723, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17560332, Length=206, Percent_Identity=29.6116504854369, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17559104, Length=219, Percent_Identity=28.7671232876712, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71982365, Length=256, Percent_Identity=24.21875, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17538480, Length=199, Percent_Identity=26.6331658291457, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17562906, Length=224, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=234, Percent_Identity=28.2051282051282, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17555706, Length=199, Percent_Identity=27.6381909547739, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562908, Length=222, Percent_Identity=29.2792792792793, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI115534694, Length=211, Percent_Identity=25.5924170616114, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI72000259, Length=203, Percent_Identity=26.1083743842365, Blast_Score=64, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=252, Percent_Identity=30.952380952381, Blast_Score=101, Evalue=9e-23,
Organism=Saccharomyces cerevisiae, GI6322861, Length=189, Percent_Identity=27.5132275132275, Blast_Score=75, Evalue=8e-15,
Organism=Drosophila melanogaster, GI23397609, Length=191, Percent_Identity=31.413612565445, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI21358495, Length=198, Percent_Identity=29.7979797979798, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24641232, Length=254, Percent_Identity=27.1653543307087, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI116007236, Length=247, Percent_Identity=27.1255060728745, Blast_Score=85, Evalue=6e-17,
Organism=Drosophila melanogaster, GI28571387, Length=255, Percent_Identity=27.4509803921569, Blast_Score=84, Evalue=8e-17,
Organism=Drosophila melanogaster, GI24639444, Length=254, Percent_Identity=28.740157480315, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24644339, Length=227, Percent_Identity=27.3127753303965, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24643142, Length=193, Percent_Identity=29.5336787564767, Blast_Score=82, Evalue=2e-16,
Organism=Drosophila melanogaster, GI18859837, Length=191, Percent_Identity=30.3664921465969, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI281364892, Length=239, Percent_Identity=25.5230125523013, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355319, Length=193, Percent_Identity=26.9430051813472, Blast_Score=79, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28571526, Length=199, Percent_Identity=27.1356783919598, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21357041, Length=199, Percent_Identity=27.1356783919598, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24580925, Length=205, Percent_Identity=29.2682926829268, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24640492, Length=237, Percent_Identity=25.3164556962025, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI281364494, Length=252, Percent_Identity=25.3968253968254, Blast_Score=71, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24649181, Length=200, Percent_Identity=26, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355631, Length=186, Percent_Identity=24.1935483870968, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21357673, Length=193, Percent_Identity=23.8341968911917, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007234, Length=247, Percent_Identity=24.2914979757085, Blast_Score=67, Evalue=8e-12,
Organism=Drosophila melanogaster, GI17737361, Length=216, Percent_Identity=25.462962962963, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24641388, Length=253, Percent_Identity=22.9249011857708, Blast_Score=66, Evalue=3e-11,
Organism=Drosophila melanogaster, GI21356301, Length=192, Percent_Identity=26.5625, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27013; Mature: 27013

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEIIIITGAGKGIGRAIAIDFARRAKEKEQCNPILILSSRTRSDLEKVAEICRDLGTET
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCE
VITETDIADTKATRNLIEMVMERFGHIDCLINNAGVGRFKSLFEMTEEDFDDTMNINAKG
EEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCE
TFFLTQKVFPIMEQQRSGHIFFISSIAAETAFKSSSVYSMSKFAQNGLIASLRLYARECN
EEEEHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCC
VRVTNIMPGAVYTPMWGESGEHFKNVMMMPEDIASATVDAYLQPGRTCVEEIVIRPTGGD
EEEEEECCCCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHEECCCCCC
INS
CCC
>Mature Secondary Structure
MKEIIIITGAGKGIGRAIAIDFARRAKEKEQCNPILILSSRTRSDLEKVAEICRDLGTET
CCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCE
VITETDIADTKATRNLIEMVMERFGHIDCLINNAGVGRFKSLFEMTEEDFDDTMNINAKG
EEECCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCE
TFFLTQKVFPIMEQQRSGHIFFISSIAAETAFKSSSVYSMSKFAQNGLIASLRLYARECN
EEEEHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHCC
VRVTNIMPGAVYTPMWGESGEHFKNVMMMPEDIASATVDAYLQPGRTCVEEIVIRPTGGD
EEEEEECCCCEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHEECCCCCC
INS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA