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The map label for this gene is dedA [H]

Identifier: 194333538

GI number: 194333538

Start: 750672

End: 751280

Strand: Reverse

Name: dedA [H]

Synonym: Paes_0704

Alternate gene names: 194333538

Gene position: 751280-750672 (Counterclockwise)

Preceding gene: 194333539

Following gene: 194333537

Centisome position: 29.9

GC content: 45.81

Gene sequence:

>609_bases
ATGAGTATTTTTTCCTCTCTTCAGCATGTTCAAACCCTCGACGAACTCATTCTCTGGGGAGGATACGCGCTTCTTTTTGC
CATTGTTTTTGCAGAAACAGGTCTCTTCGCCGGTTTTTTTCTGCCGGGCGACTCACTGCTTATCACTGCAGGCCTGATTG
CTGCGTCAGGCAAACTCGACATCTCGCTGGTCATAGCCACCCTCTGCTGTGGAGCTATCCTTGGAGACTCGACAGGCTAC
TTTATCGGTACGCGGCTTCAACGAGCATTTTTCAAAAAAAATGAAACGCTTTTTTTCAGAAAGGAACACGTGGAAAAAAC
AGAACGATTTTACGAAAAGCATGGTTCCAAGGCAGTTTTTCTTGCACGCTTCGTTCCTGTTGTCAGAAGCTTCACAACAA
CCCTTGCCGGTGTTGCCGCTATGCCCTATCCTGTTTTTCTTTTCTACAGCGTTACCGGGGCATCGACCTGGGTACTCTGT
TTTACCCTGATAGGCTATTTTCTTGCGACAATCTTTCCTGACCTTGTTGATTATGTTCACTATATTATTCTGGCTGGTAT
CGTTATCATTCTCATAAGCGCATTACGGCACCTCAGCAAAAAAACCTGA

Upstream 100 bases:

>100_bases
TACAACAAATTCCTCCTGCAGAACAACGCAGGAGGAAGACGTTTTTTTTCTCTTTCCATCGTTCTCCTGCTCCCTCGAAA
ACCTCTTTCACTGCCAGCGC

Downstream 100 bases:

>100_bases
ACATCCTGTAACACAATCATCCTCATACCATGCTCAACCGAGTCATTCAATATGCACCGGTCACTGCAAAAGGCATACTG
ATGGGAGCAGCCGATATCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSIFSSLQHVQTLDELILWGGYALLFAIVFAETGLFAGFFLPGDSLLITAGLIAASGKLDISLVIATLCCGAILGDSTGY
FIGTRLQRAFFKKNETLFFRKEHVEKTERFYEKHGSKAVFLARFVPVVRSFTTTLAGVAAMPYPVFLFYSVTGASTWVLC
FTLIGYFLATIFPDLVDYVHYIILAGIVIILISALRHLSKKT

Sequences:

>Translated_202_residues
MSIFSSLQHVQTLDELILWGGYALLFAIVFAETGLFAGFFLPGDSLLITAGLIAASGKLDISLVIATLCCGAILGDSTGY
FIGTRLQRAFFKKNETLFFRKEHVEKTERFYEKHGSKAVFLARFVPVVRSFTTTLAGVAAMPYPVFLFYSVTGASTWVLC
FTLIGYFLATIFPDLVDYVHYIILAGIVIILISALRHLSKKT
>Mature_201_residues
SIFSSLQHVQTLDELILWGGYALLFAIVFAETGLFAGFFLPGDSLLITAGLIAASGKLDISLVIATLCCGAILGDSTGYF
IGTRLQRAFFKKNETLFFRKEHVEKTERFYEKHGSKAVFLARFVPVVRSFTTTLAGVAAMPYPVFLFYSVTGASTWVLCF
TLIGYFLATIFPDLVDYVHYIILAGIVIILISALRHLSKKT

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=183, Percent_Identity=42.0765027322404, Blast_Score=139, Evalue=1e-34,
Organism=Escherichia coli, GI1789481, Length=148, Percent_Identity=32.4324324324324, Blast_Score=84, Evalue=7e-18,
Organism=Escherichia coli, GI1789384, Length=150, Percent_Identity=34, Blast_Score=81, Evalue=4e-17,
Organism=Escherichia coli, GI87082056, Length=154, Percent_Identity=27.9220779220779, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22315; Mature: 22183

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFSSLQHVQTLDELILWGGYALLFAIVFAETGLFAGFFLPGDSLLITAGLIAASGKLD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCH
ISLVIATLCCGAILGDSTGYFIGTRLQRAFFKKNETLFFRKEHVEKTERFYEKHGSKAVF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHH
LARFVPVVRSFTTTLAGVAAMPYPVFLFYSVTGASTWVLCFTLIGYFLATIFPDLVDYVH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIILAGIVIILISALRHLSKKT
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIFSSLQHVQTLDELILWGGYALLFAIVFAETGLFAGFFLPGDSLLITAGLIAASGKLD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHCCCCCH
ISLVIATLCCGAILGDSTGYFIGTRLQRAFFKKNETLFFRKEHVEKTERFYEKHGSKAVF
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHCCCCHHH
LARFVPVVRSFTTTLAGVAAMPYPVFLFYSVTGASTWVLCFTLIGYFLATIFPDLVDYVH
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YIILAGIVIILISALRHLSKKT
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]