Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333385
Identifier: 194333385
GI number: 194333385
Start: 585124
End: 586194
Strand: Reverse
Name: 194333385
Synonym: Paes_0542
Alternate gene names: NA
Gene position: 586194-585124 (Counterclockwise)
Preceding gene: 194333386
Following gene: 194333383
Centisome position: 23.33
GC content: 52.1
Gene sequence:
>1071_bases ATGGCAGATCATATGCAGAGCCCACCCACAAAAGCTCCTGATAGCAGCACAACCAGACCGCCCAGAAAAAAACCCAGCCT GCTGGTTATCACCGTCATTCTGGGAACCATCGGTCTCGTCACTCAGATGCTCTGGGTCAACTGGCCCAAACAAAAAGCCC AACCCGAGCCGCTCAGCGCAGAACTTCGTGAAGTGATTGATCGGCTGCCCGGCATTTCAGACGCTCTTATCTACATCGGA CTCAAGGATATCCGCCAGACACCGTTCTGGAGCACCATGGTGCCGGACTCCATAAAACAGGTCAACTGGCTGCAGTTCGA TACGACCCTCACACGGGTCATGAACGAATCCGGTTTTCAGCCATCACGCGATATCGATACGCTCCTTGTTGAATTCCAGA GCAAGAACTCCAGAAGACACAAATATATGAGCGTGATCTGGGGAACCTTTCCCGCCGGGCTCGACGAAAACCACCTCATA GAGCAATCCGGGAAAAAGGAAATCATTGCAGGACAAACCTGTATCGGTCTGAGCGATGAACTCTGGATCTGCCGACCGTC TGAACGCATGGCACTGGTAGCCAGTTCAGCCGATATTATGGAACGCTTTCTGCAACCCCATTCAAGTTTTCTCGAAAGGG ATTCGACGACAACAGCGCTCATCGACAAAGCCATCTATAAATCCCATCTCTGGTTCACGCTTTCATCCCCCAACTGGACA ATCGGCGCACTCCAGAGCCTGACATCGGGCAACAAAGATATCAACACGCTCGGCAACCTCAACAGAATTCGTCAGCTTGC ACTCTCCCTGCGTTTCGATGACGGGATCAGCGGGCAGACCGAATGGGTCTACAAGGACCGTCAGACCGCCTATTTTGCCT CAACATTCCTCTGGAGCGCCATAAAGCTGTCAAGTACAGCAGGAACAAGAACATCGGAACCCGTCAAGGCTCTGCTGAAA AGGCTCCATGTCATGCAGAACCTGAACTCCGTTGTCATAAAAACAGAGCTGCCTCTCGATATTTTCACTCCCGGCAACCA GGACACAGCCGAAAAACCGGTGGCGCAATAA
Upstream 100 bases:
>100_bases TGCACAACGTAACGTTCCACAAGGTCAAGGGCCATAGCGACAACGAATACAACAACCGCTGCGACTATCTCGCCCGACAG GCCATCAAAAACAACCGGTA
Downstream 100 bases:
>100_bases CCTCTCAGGGTTACAAAGGCTGACCAAAAGGTCAGCCCTTCTCCGCATCGCTCTTTGCTGGTGGATGAAAACAGATCAAC TTCCCTTTCCATACCGCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MADHMQSPPTKAPDSSTTRPPRKKPSLLVITVILGTIGLVTQMLWVNWPKQKAQPEPLSAELREVIDRLPGISDALIYIG LKDIRQTPFWSTMVPDSIKQVNWLQFDTTLTRVMNESGFQPSRDIDTLLVEFQSKNSRRHKYMSVIWGTFPAGLDENHLI EQSGKKEIIAGQTCIGLSDELWICRPSERMALVASSADIMERFLQPHSSFLERDSTTTALIDKAIYKSHLWFTLSSPNWT IGALQSLTSGNKDINTLGNLNRIRQLALSLRFDDGISGQTEWVYKDRQTAYFASTFLWSAIKLSSTAGTRTSEPVKALLK RLHVMQNLNSVVIKTELPLDIFTPGNQDTAEKPVAQ
Sequences:
>Translated_356_residues MADHMQSPPTKAPDSSTTRPPRKKPSLLVITVILGTIGLVTQMLWVNWPKQKAQPEPLSAELREVIDRLPGISDALIYIG LKDIRQTPFWSTMVPDSIKQVNWLQFDTTLTRVMNESGFQPSRDIDTLLVEFQSKNSRRHKYMSVIWGTFPAGLDENHLI EQSGKKEIIAGQTCIGLSDELWICRPSERMALVASSADIMERFLQPHSSFLERDSTTTALIDKAIYKSHLWFTLSSPNWT IGALQSLTSGNKDINTLGNLNRIRQLALSLRFDDGISGQTEWVYKDRQTAYFASTFLWSAIKLSSTAGTRTSEPVKALLK RLHVMQNLNSVVIKTELPLDIFTPGNQDTAEKPVAQ >Mature_355_residues ADHMQSPPTKAPDSSTTRPPRKKPSLLVITVILGTIGLVTQMLWVNWPKQKAQPEPLSAELREVIDRLPGISDALIYIGL KDIRQTPFWSTMVPDSIKQVNWLQFDTTLTRVMNESGFQPSRDIDTLLVEFQSKNSRRHKYMSVIWGTFPAGLDENHLIE QSGKKEIIAGQTCIGLSDELWICRPSERMALVASSADIMERFLQPHSSFLERDSTTTALIDKAIYKSHLWFTLSSPNWTI GALQSLTSGNKDINTLGNLNRIRQLALSLRFDDGISGQTEWVYKDRQTAYFASTFLWSAIKLSSTAGTRTSEPVKALLKR LHVMQNLNSVVIKTELPLDIFTPGNQDTAEKPVAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40025; Mature: 39894
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHMQSPPTKAPDSSTTRPPRKKPSLLVITVILGTIGLVTQMLWVNWPKQKAQPEPLSA CCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHH ELREVIDRLPGISDALIYIGLKDIRQTPFWSTMVPDSIKQVNWLQFDTTLTRVMNESGFQ HHHHHHHHCCCCCHHHEEEEHHHHHCCCCCCCCCCHHHHHCCEEEHHHHHHHHHHHCCCC PSRDIDTLLVEFQSKNSRRHKYMSVIWGTFPAGLDENHLIEQSGKKEIIAGQTCIGLSDE CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCEEECCCCC LWICRPSERMALVASSADIMERFLQPHSSFLERDSTTTALIDKAIYKSHLWFTLSSPNWT EEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCH IGALQSLTSGNKDINTLGNLNRIRQLALSLRFDDGISGQTEWVYKDRQTAYFASTFLWSA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHH IKLSSTAGTRTSEPVKALLKRLHVMQNLNSVVIKTELPLDIFTPGNQDTAEKPVAQ HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCCC >Mature Secondary Structure ADHMQSPPTKAPDSSTTRPPRKKPSLLVITVILGTIGLVTQMLWVNWPKQKAQPEPLSA CCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHH ELREVIDRLPGISDALIYIGLKDIRQTPFWSTMVPDSIKQVNWLQFDTTLTRVMNESGFQ HHHHHHHHCCCCCHHHEEEEHHHHHCCCCCCCCCCHHHHHCCEEEHHHHHHHHHHHCCCC PSRDIDTLLVEFQSKNSRRHKYMSVIWGTFPAGLDENHLIEQSGKKEIIAGQTCIGLSDE CCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEECCEEECCCCC LWICRPSERMALVASSADIMERFLQPHSSFLERDSTTTALIDKAIYKSHLWFTLSSPNWT EEEECCCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEEECCCCCH IGALQSLTSGNKDINTLGNLNRIRQLALSLRFDDGISGQTEWVYKDRQTAYFASTFLWSA HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHH IKLSSTAGTRTSEPVKALLKRLHVMQNLNSVVIKTELPLDIFTPGNQDTAEKPVAQ HHHCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA