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The map label for this gene is 194333367

Identifier: 194333367

GI number: 194333367

Start: 568763

End: 569560

Strand: Reverse

Name: 194333367

Synonym: Paes_0524

Alternate gene names: NA

Gene position: 569560-568763 (Counterclockwise)

Preceding gene: 194333368

Following gene: 194333357

Centisome position: 22.67

GC content: 55.89

Gene sequence:

>798_bases
ATGCGCATAACCCTCCAACTCTCCCACCGCTCCCGCCACCTCACCCTGCCGGTGAATATCAATCACCTGGTATCATCCCT
TATCTACAACATTGTCTCGAACAGCTCCAGCGAGTTTGCAGAGAAGCTTCATGAGCAGGGTTACAGGCTGGAGAAGCGGA
CGTTCAAGCTGTTTACGTTTTCGCCGCTGATTCCGGCGGGTCACCGGCGGTGGCGGATGAACGGGGACGGGACGATGACG
ACGGATGCGCAGAGCGTGTCGCTTTTGATTTCCTCAGGGAAAGCTGAGTTTGTGGAACATCTGGTTGTGGGGCTTTTGCA
TCAGCCGTTGGTGCAGATCGGGGCTCAGCGATTCAGGGTCGAGACGGTCAAGAAGCTTGATCCACCACAACTCTCCGACG
ATATGGCGTGTATCATGATGTCGCCTCTGGTCTGTTCGGCGAAACGTGATGGTGATAAGTACCCCCGGTTCCTGCTGCAG
GATGACGAAGAGTTTGAACGGGTGCTGCTGGAGAACCTGCTGGGCAAGTACGAGGCCATGCATGGCAAGCCCTATGAAGG
ACGTGCAGAACTTCATTTCGACGTTGCGAAAGAATATATCGAGCGAAGGAATGGCGCTATCACGAAACTGATCACCCTGA
AAGAGGGCTCACCCGACGAGACGAAAGTTCGTGGGACGCTTGCGCCGTTCCGGCTGCGCGTCGCACGGCCTCTGATGGAG
GTCGGCTATGACTGCGGCTTCGGGGGTCTGAACGCACAGGGGTTCGGCATGGTGAAAATGAGTAACCTTACCTCTTGA

Upstream 100 bases:

>100_bases
GTCCGGGGTCCACTTCAGGTGATGCCGGAACTACGCCAAGCTACCCTTTTAACCCCGTTTTTCCATTAACTTCTACGAAG
AGCCAAATAGATTATCATCC

Downstream 100 bases:

>100_bases
CAGCGACGCTATTGTCCCTCTACTCCCCTGCCTTTTGCCGATACGCTTCTGCTTTCTCCTCATCGCCAAGCGCTTTGTAA
ACCTCTGACAGATGCTGATA

Product: CRISPR-associated protein Cas6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRITLQLSHRSRHLTLPVNINHLVSSLIYNIVSNSSSEFAEKLHEQGYRLEKRTFKLFTFSPLIPAGHRRWRMNGDGTMT
TDAQSVSLLISSGKAEFVEHLVVGLLHQPLVQIGAQRFRVETVKKLDPPQLSDDMACIMMSPLVCSAKRDGDKYPRFLLQ
DDEEFERVLLENLLGKYEAMHGKPYEGRAELHFDVAKEYIERRNGAITKLITLKEGSPDETKVRGTLAPFRLRVARPLME
VGYDCGFGGLNAQGFGMVKMSNLTS

Sequences:

>Translated_265_residues
MRITLQLSHRSRHLTLPVNINHLVSSLIYNIVSNSSSEFAEKLHEQGYRLEKRTFKLFTFSPLIPAGHRRWRMNGDGTMT
TDAQSVSLLISSGKAEFVEHLVVGLLHQPLVQIGAQRFRVETVKKLDPPQLSDDMACIMMSPLVCSAKRDGDKYPRFLLQ
DDEEFERVLLENLLGKYEAMHGKPYEGRAELHFDVAKEYIERRNGAITKLITLKEGSPDETKVRGTLAPFRLRVARPLME
VGYDCGFGGLNAQGFGMVKMSNLTS
>Mature_265_residues
MRITLQLSHRSRHLTLPVNINHLVSSLIYNIVSNSSSEFAEKLHEQGYRLEKRTFKLFTFSPLIPAGHRRWRMNGDGTMT
TDAQSVSLLISSGKAEFVEHLVVGLLHQPLVQIGAQRFRVETVKKLDPPQLSDDMACIMMSPLVCSAKRDGDKYPRFLLQ
DDEEFERVLLENLLGKYEAMHGKPYEGRAELHFDVAKEYIERRNGAITKLITLKEGSPDETKVRGTLAPFRLRVARPLME
VGYDCGFGGLNAQGFGMVKMSNLTS

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010156
- InterPro:   IPR002743 [H]

Pfam domain/function: PF01881 DUF57 [H]

EC number: NA

Molecular weight: Translated: 29964; Mature: 29964

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRITLQLSHRSRHLTLPVNINHLVSSLIYNIVSNSSSEFAEKLHEQGYRLEKRTFKLFTF
CEEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHEEEEEEE
SPLIPAGHRRWRMNGDGTMTTDAQSVSLLISSGKAEFVEHLVVGLLHQPLVQIGAQRFRV
CCCCCCCCCEEEECCCCCEEECHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVKKLDPPQLSDDMACIMMSPLVCSAKRDGDKYPRFLLQDDEEFERVLLENLLGKYEAM
HHHHHCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH
HGKPYEGRAELHFDVAKEYIERRNGAITKLITLKEGSPDETKVRGTLAPFRLRVARPLME
CCCCCCCCHHEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHH
VGYDCGFGGLNAQGFGMVKMSNLTS
CCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MRITLQLSHRSRHLTLPVNINHLVSSLIYNIVSNSSSEFAEKLHEQGYRLEKRTFKLFTF
CEEEEEECCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEHHHEEEEEEE
SPLIPAGHRRWRMNGDGTMTTDAQSVSLLISSGKAEFVEHLVVGLLHQPLVQIGAQRFRV
CCCCCCCCCEEEECCCCCEEECHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETVKKLDPPQLSDDMACIMMSPLVCSAKRDGDKYPRFLLQDDEEFERVLLENLLGKYEAM
HHHHHCCCCCCCCCHHHHHHCCHHHCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHH
HGKPYEGRAELHFDVAKEYIERRNGAITKLITLKEGSPDETKVRGTLAPFRLRVARPLME
CCCCCCCCHHEEHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHH
VGYDCGFGGLNAQGFGMVKMSNLTS
CCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]