Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333346
Identifier: 194333346
GI number: 194333346
Start: 541491
End: 542033
Strand: Reverse
Name: 194333346
Synonym: Paes_0503
Alternate gene names: NA
Gene position: 542033-541491 (Counterclockwise)
Preceding gene: 194333347
Following gene: 194333343
Centisome position: 21.57
GC content: 49.91
Gene sequence:
>543_bases ATGCGATATCTTGTAGGCCTTGCAATCATGCTTCTTGCACCGACGCTCATGCTGTCGGGCTGCAATAATTCAGGCTCAAT GGAGTCAAAGAAAGAATCTGCATCAACAACCCTCAAAGCAGCTGTTCTTGAAGCCTGCGGACTGATTTCAAAATCTGAAG CAGAAACGCTCCTCGGCGAACCGGTTATGGATGCGGAAAAGAGCCAACAGGAGGTTGTCGGGATGAAGCTGTGTCTGTAC AATCCTGTCAACACCGATTCCTGGGGCTTTCTGCAGGTCACACTGACCCAGCAGTCATTCATGCCGCCTGGCGGACTCGC TCCATCGGAACTTTTCCATTCCATACAGAAGGCAATGAGCGACTCGAGAACCGACATTGAGGGAATAGGAGACGAAGCCT TTATTGCAACAGGAGGTCTCTACATCCTGAAAGACGAATACTATATCACCATAGGAGCGGGAAATATCGATCGCCAGGAT ATTCAGCAACGCCTGAAAAGCGCTGGCTCGATAGCCATAAAAAACCTTGAGGCGCTTCGCTGA
Upstream 100 bases:
>100_bases ACTTATAAAGAAGCCGTCCCGGTCGATGATGACCGGGACGGCTTCTTTATGTATATTTTGCTGTAAAGAACTTTTCGATA GAACAACAGGAGGTGTATCC
Downstream 100 bases:
>100_bases CTACCATGCAACGCCAACACAGTCAGGAGTCACGGCTTACAGATACCGCACGGTTTGAAGCCGGCATCAATAGCCTTCTG TCGTGAGCTAAACTCCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MRYLVGLAIMLLAPTLMLSGCNNSGSMESKKESASTTLKAAVLEACGLISKSEAETLLGEPVMDAEKSQQEVVGMKLCLY NPVNTDSWGFLQVTLTQQSFMPPGGLAPSELFHSIQKAMSDSRTDIEGIGDEAFIATGGLYILKDEYYITIGAGNIDRQD IQQRLKSAGSIAIKNLEALR
Sequences:
>Translated_180_residues MRYLVGLAIMLLAPTLMLSGCNNSGSMESKKESASTTLKAAVLEACGLISKSEAETLLGEPVMDAEKSQQEVVGMKLCLY NPVNTDSWGFLQVTLTQQSFMPPGGLAPSELFHSIQKAMSDSRTDIEGIGDEAFIATGGLYILKDEYYITIGAGNIDRQD IQQRLKSAGSIAIKNLEALR >Mature_180_residues MRYLVGLAIMLLAPTLMLSGCNNSGSMESKKESASTTLKAAVLEACGLISKSEAETLLGEPVMDAEKSQQEVVGMKLCLY NPVNTDSWGFLQVTLTQQSFMPPGGLAPSELFHSIQKAMSDSRTDIEGIGDEAFIATGGLYILKDEYYITIGAGNIDRQD IQQRLKSAGSIAIKNLEALR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19384; Mature: 19384
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYLVGLAIMLLAPTLMLSGCNNSGSMESKKESASTTLKAAVLEACGLISKSEAETLLGE CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC PVMDAEKSQQEVVGMKLCLYNPVNTDSWGFLQVTLTQQSFMPPGGLAPSELFHSIQKAMS CCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHC DSRTDIEGIGDEAFIATGGLYILKDEYYITIGAGNIDRQDIQQRLKSAGSIAIKNLEALR CCCCCHHCCCCCEEEEECCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCEEEHHHHHCC >Mature Secondary Structure MRYLVGLAIMLLAPTLMLSGCNNSGSMESKKESASTTLKAAVLEACGLISKSEAETLLGE CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC PVMDAEKSQQEVVGMKLCLYNPVNTDSWGFLQVTLTQQSFMPPGGLAPSELFHSIQKAMS CCCCHHHHHHHHHHHHHEEECCCCCCCCEEEEEEEEHHHCCCCCCCCHHHHHHHHHHHHC DSRTDIEGIGDEAFIATGGLYILKDEYYITIGAGNIDRQDIQQRLKSAGSIAIKNLEALR CCCCCHHCCCCCEEEEECCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCEEEHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA