Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194333307

Identifier: 194333307

GI number: 194333307

Start: 498798

End: 499253

Strand: Reverse

Name: 194333307

Synonym: Paes_0464

Alternate gene names: NA

Gene position: 499253-498798 (Counterclockwise)

Preceding gene: 194333308

Following gene: 194333306

Centisome position: 19.87

GC content: 52.19

Gene sequence:

>456_bases
ATGAACATCGGTAAACTGCTTGGAGGCGCCATTGTCCTCCTCATTCTCATTCAGCTGGTCCCATACGGAAGAGACCACAG
CAATCCGCCCGTTACGGGTGAACCGGTATGGAACAGCGAAAGAACACAAGAGCTCTTTTCAAGATCGTGCCGTGACTGCC
ACTCCAATGAAACCGTCTGGCCGTGGTATACACATATAGCCCCTGCATCGTGGCTCGCACAGTTCGATGTGGAACACGGG
CGGGAGAAATTCAATGTTTCTGAGTGGGGACGGCCTGGAAAAAACGAAGGTGATGAGGCTGCCGAAGAAGTACGGAGCGG
GAAAATGCCCCCGTTTTTCTACTTTCCCCTCCATCCCGAGGCAAAGCTGAGCGAAACAGAACGTCAGGAACTGGTTGACG
GACTGATAGCGACCTTCGGTGAAGAACATGGCCACGACAATGAAGAAAAGGAATAA

Upstream 100 bases:

>100_bases
TTGCCTTTTATACATTAAGTTTACACCACAGCGTCCTCTTATCAAGGCAAACGGCTTTTGGAAAAAATACTTTTCTTCAT
CAACAACCAGGAGGTCACGT

Downstream 100 bases:

>100_bases
AAACGAGAGCATATCAGCGGGGGAAAGAAGCTTCTCCCCCGCTGTTTTCACCGATAGCAGCAGACACACATCATCAATTG
CACCTCAATGAGAGACAACC

Product: cytochrome c putative

Products: NA

Alternate protein names: Signal Peptide

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVWPWYTHIAPASWLAQFDVEHG
REKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPEAKLSETERQELVDGLIATFGEEHGHDNEEKE

Sequences:

>Translated_151_residues
MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVWPWYTHIAPASWLAQFDVEHG
REKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPEAKLSETERQELVDGLIATFGEEHGHDNEEKE
>Mature_151_residues
MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVWPWYTHIAPASWLAQFDVEHG
REKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPEAKLSETERQELVDGLIATFGEEHGHDNEEKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17198; Mature: 17198

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVW
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PWYTHIAPASWLAQFDVEHGREKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPE
CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCC
AKLSETERQELVDGLIATFGEEHGHDNEEKE
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVW
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PWYTHIAPASWLAQFDVEHGREKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPE
CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCC
AKLSETERQELVDGLIATFGEEHGHDNEEKE
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA