Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333307
Identifier: 194333307
GI number: 194333307
Start: 498798
End: 499253
Strand: Reverse
Name: 194333307
Synonym: Paes_0464
Alternate gene names: NA
Gene position: 499253-498798 (Counterclockwise)
Preceding gene: 194333308
Following gene: 194333306
Centisome position: 19.87
GC content: 52.19
Gene sequence:
>456_bases ATGAACATCGGTAAACTGCTTGGAGGCGCCATTGTCCTCCTCATTCTCATTCAGCTGGTCCCATACGGAAGAGACCACAG CAATCCGCCCGTTACGGGTGAACCGGTATGGAACAGCGAAAGAACACAAGAGCTCTTTTCAAGATCGTGCCGTGACTGCC ACTCCAATGAAACCGTCTGGCCGTGGTATACACATATAGCCCCTGCATCGTGGCTCGCACAGTTCGATGTGGAACACGGG CGGGAGAAATTCAATGTTTCTGAGTGGGGACGGCCTGGAAAAAACGAAGGTGATGAGGCTGCCGAAGAAGTACGGAGCGG GAAAATGCCCCCGTTTTTCTACTTTCCCCTCCATCCCGAGGCAAAGCTGAGCGAAACAGAACGTCAGGAACTGGTTGACG GACTGATAGCGACCTTCGGTGAAGAACATGGCCACGACAATGAAGAAAAGGAATAA
Upstream 100 bases:
>100_bases TTGCCTTTTATACATTAAGTTTACACCACAGCGTCCTCTTATCAAGGCAAACGGCTTTTGGAAAAAATACTTTTCTTCAT CAACAACCAGGAGGTCACGT
Downstream 100 bases:
>100_bases AAACGAGAGCATATCAGCGGGGGAAAGAAGCTTCTCCCCCGCTGTTTTCACCGATAGCAGCAGACACACATCATCAATTG CACCTCAATGAGAGACAACC
Product: cytochrome c putative
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVWPWYTHIAPASWLAQFDVEHG REKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPEAKLSETERQELVDGLIATFGEEHGHDNEEKE
Sequences:
>Translated_151_residues MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVWPWYTHIAPASWLAQFDVEHG REKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPEAKLSETERQELVDGLIATFGEEHGHDNEEKE >Mature_151_residues MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVWPWYTHIAPASWLAQFDVEHG REKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPEAKLSETERQELVDGLIATFGEEHGHDNEEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17198; Mature: 17198
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVW CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC PWYTHIAPASWLAQFDVEHGREKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPE CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCC AKLSETERQELVDGLIATFGEEHGHDNEEKE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNIGKLLGGAIVLLILIQLVPYGRDHSNPPVTGEPVWNSERTQELFSRSCRDCHSNETVW CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC PWYTHIAPASWLAQFDVEHGREKFNVSEWGRPGKNEGDEAAEEVRSGKMPPFFYFPLHPE CHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHHCCCCCCEEEECCCCC AKLSETERQELVDGLIATFGEEHGHDNEEKE CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA