Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194333303
Identifier: 194333303
GI number: 194333303
Start: 492436
End: 493128
Strand: Reverse
Name: 194333303
Synonym: Paes_0460
Alternate gene names: NA
Gene position: 493128-492436 (Counterclockwise)
Preceding gene: 194333304
Following gene: 194333302
Centisome position: 19.62
GC content: 47.76
Gene sequence:
>693_bases ATGCTGAATAAACTTGTTCTCTTTGACATTGATGGCACCCTTCTGACAGTAGGCAATATTAACCGTCAGACGTTAATTGA TGCCCTTATTGAAGTCTATGATACCGAAGGAAGTGCCCGGCAACACAATTTTGCCGGCAAAATGGACAGCGTTATCATCT ACGAAGTTCTTCAGAGCACAGGCCTGACCGATAAAGAGATCGCTCTGGGTTTTGAACAGGTCAAACAAACCTATATCGAA CTTTTCCGTCAGCAGGCCAAAGCCGACGATATTATCCTGATGAACGGCATTCCGGAACTTCTTGCTTCGCTTTCAGAACG CGACGACATTCTTCTTGGCCTGCTGACAGGTAACTTTGAAGGCTCAGGGCGCCACAAGCTCCACCTTCCCTCGATCAACC ATTATTTTTCTTTTGGAGCGTTCGCTGATGATGCCAGGCATCGCAACGATCTCCCCGCCATAGCGGTCGAACGCGCCAGA AATATCACGGGAAAAACATTTACGCCACAAGAGGTCATCATCATCGGTGACACAGAACACGATATCAGGTGCGCCAGGGC AATCGAGGCCAGATGCATTGCCGTAGCAACCGGAAACTACTCCTCCGAAACCCTCCTGGAACACAAGCCTGATGCTCTTT TTGAAGATTTCAGCGATACAGAAAAGGTCATCAGAAGCATTGTCTCATTTTAA
Upstream 100 bases:
>100_bases TCCCGGGCACTCTATGGAGTGACAATGGAAGAAGAAGGGGTATCGAAACTCATTCCAGTCAAACTGGAAAAAAAACATGC GGAACGTTCATCAGGAAACG
Downstream 100 bases:
>100_bases TTAAATCAACTGCTCTTTTATGAAGGCTCATCGACGACACATACGCGAAAAAATTGTACAGGCGCTCTACACCCTTGACG TTCGCGATACCGATACCGCA
Product: Haloacid dehalogenase domain-containing protein hydrolase
Products: NA
Alternate protein names: Hydrolase; Haloacid Dehalogenase Domain-Containing Protein Hydrolase; HAD Superfamily Hydrolase; Phosphoglycolate Phosphatase; Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase-Like Hydrolase Domain Protein; HAD Family Hydrolase
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MLNKLVLFDIDGTLLTVGNINRQTLIDALIEVYDTEGSARQHNFAGKMDSVIIYEVLQSTGLTDKEIALGFEQVKQTYIE LFRQQAKADDIILMNGIPELLASLSERDDILLGLLTGNFEGSGRHKLHLPSINHYFSFGAFADDARHRNDLPAIAVERAR NITGKTFTPQEVIIIGDTEHDIRCARAIEARCIAVATGNYSSETLLEHKPDALFEDFSDTEKVIRSIVSF
Sequences:
>Translated_230_residues MLNKLVLFDIDGTLLTVGNINRQTLIDALIEVYDTEGSARQHNFAGKMDSVIIYEVLQSTGLTDKEIALGFEQVKQTYIE LFRQQAKADDIILMNGIPELLASLSERDDILLGLLTGNFEGSGRHKLHLPSINHYFSFGAFADDARHRNDLPAIAVERAR NITGKTFTPQEVIIIGDTEHDIRCARAIEARCIAVATGNYSSETLLEHKPDALFEDFSDTEKVIRSIVSF >Mature_230_residues MLNKLVLFDIDGTLLTVGNINRQTLIDALIEVYDTEGSARQHNFAGKMDSVIIYEVLQSTGLTDKEIALGFEQVKQTYIE LFRQQAKADDIILMNGIPELLASLSERDDILLGLLTGNFEGSGRHKLHLPSINHYFSFGAFADDARHRNDLPAIAVERAR NITGKTFTPQEVIIIGDTEHDIRCARAIEARCIAVATGNYSSETLLEHKPDALFEDFSDTEKVIRSIVSF
Specific function: Unknown
COG id: COG0546
COG function: function code R; Predicted phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25639; Mature: 25639
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: PS01228 COF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNKLVLFDIDGTLLTVGNINRQTLIDALIEVYDTEGSARQHNFAGKMDSVIIYEVLQST CCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHC GLTDKEIALGFEQVKQTYIELFRQQAKADDIILMNGIPELLASLSERDDILLGLLTGNFE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEEEEEEECCCC GSGRHKLHLPSINHYFSFGAFADDARHRNDLPAIAVERARNITGKTFTPQEVIIIGDTEH CCCCEEEECCCCHHHHCCCCHHCCHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCC DIRCARAIEARCIAVATGNYSSETLLEHKPDALFEDFSDTEKVIRSIVSF HHHHHHHHHCEEEEEEECCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MLNKLVLFDIDGTLLTVGNINRQTLIDALIEVYDTEGSARQHNFAGKMDSVIIYEVLQST CCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCHHCCCCCCHHHHHHHHHHHHC GLTDKEIALGFEQVKQTYIELFRQQAKADDIILMNGIPELLASLSERDDILLGLLTGNFE CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHCCCCCEEEEEEECCCC GSGRHKLHLPSINHYFSFGAFADDARHRNDLPAIAVERARNITGKTFTPQEVIIIGDTEH CCCCEEEECCCCHHHHCCCCHHCCHHCCCCCCHHHHHHHCCCCCCCCCCCEEEEECCCCC DIRCARAIEARCIAVATGNYSSETLLEHKPDALFEDFSDTEKVIRSIVSF HHHHHHHHHCEEEEEEECCCCCCHHHHCCCCHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA