Definition Prosthecochloris aestuarii DSM 271 chromosome, complete genome.
Accession NC_011059
Length 2,512,923

Click here to switch to the map view.

The map label for this gene is 194333265

Identifier: 194333265

GI number: 194333265

Start: 456199

End: 456597

Strand: Reverse

Name: 194333265

Synonym: Paes_0421

Alternate gene names: NA

Gene position: 456597-456199 (Counterclockwise)

Preceding gene: 194333266

Following gene: 194333264

Centisome position: 18.17

GC content: 47.37

Gene sequence:

>399_bases
ATGTCGCATTTTTTCAGCAGAGAAAAACAAAAGCCGGCAACCGGCAGGGATGAGCCCGGCATTGCCGAACTCATCAGCAA
CACTATAACTGAAAGCTACGATGATCTGCTCGACATTATCGACGCAAAAGCAGAGCTCATAAAAATCGAGCTCACCGAAA
AACTTGCCATTGTGGGCGCGCTGCTGATCATGGCGATCCTGCTTCTGGCAGGAATCATCTATCTCTTCACATCGATTGCT
CTTCTCGTCGGGGAACTGCTCGGCCATATGTATCTGGGCTACCTTATACTCAGCTCCTGTTTCCTGCTGTGCGTCCTGTT
TTTCACAAAAATCAGACCATCACTGCTCAAAAACATGATCCATAAAATTCTTCTCTCAACCCATGGCACAAGACACTGA

Upstream 100 bases:

>100_bases
CATCAAAGACAACCCCGTCGAATCCGTGCTGTACTCGCTTGGCGCAGGCGTTGTTCTTGGTTTTATTCTTCACAAAAAGC
GCTAAAACGTATCGCTCATC

Downstream 100 bases:

>100_bases
ACCGTTCACGAACATCGAAGCCCGGATACAGCACCTGCAGGACAGCATTGCACAACACAGCCAACAGCTGAAAACACGCG
CGTCGCGCCTGAAGGATGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGALLIMAILLLAGIIYLFTSIA
LLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMIHKILLSTHGTRH

Sequences:

>Translated_132_residues
MSHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGALLIMAILLLAGIIYLFTSIA
LLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMIHKILLSTHGTRH
>Mature_131_residues
SHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGALLIMAILLLAGIIYLFTSIAL
LVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMIHKILLSTHGTRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14729; Mature: 14598

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGA
CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIMAILLLAGIIYLFTSIALLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKILLSTHGTRH
HHHHHHHCCCCC
>Mature Secondary Structure 
SHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGA
CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLIMAILLLAGIIYLFTSIALLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HKILLSTHGTRH
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA