Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
---|---|
Accession | NC_011059 |
Length | 2,512,923 |
Click here to switch to the map view.
The map label for this gene is 194333265
Identifier: 194333265
GI number: 194333265
Start: 456199
End: 456597
Strand: Reverse
Name: 194333265
Synonym: Paes_0421
Alternate gene names: NA
Gene position: 456597-456199 (Counterclockwise)
Preceding gene: 194333266
Following gene: 194333264
Centisome position: 18.17
GC content: 47.37
Gene sequence:
>399_bases ATGTCGCATTTTTTCAGCAGAGAAAAACAAAAGCCGGCAACCGGCAGGGATGAGCCCGGCATTGCCGAACTCATCAGCAA CACTATAACTGAAAGCTACGATGATCTGCTCGACATTATCGACGCAAAAGCAGAGCTCATAAAAATCGAGCTCACCGAAA AACTTGCCATTGTGGGCGCGCTGCTGATCATGGCGATCCTGCTTCTGGCAGGAATCATCTATCTCTTCACATCGATTGCT CTTCTCGTCGGGGAACTGCTCGGCCATATGTATCTGGGCTACCTTATACTCAGCTCCTGTTTCCTGCTGTGCGTCCTGTT TTTCACAAAAATCAGACCATCACTGCTCAAAAACATGATCCATAAAATTCTTCTCTCAACCCATGGCACAAGACACTGA
Upstream 100 bases:
>100_bases CATCAAAGACAACCCCGTCGAATCCGTGCTGTACTCGCTTGGCGCAGGCGTTGTTCTTGGTTTTATTCTTCACAAAAAGC GCTAAAACGTATCGCTCATC
Downstream 100 bases:
>100_bases ACCGTTCACGAACATCGAAGCCCGGATACAGCACCTGCAGGACAGCATTGCACAACACAGCCAACAGCTGAAAACACGCG CGTCGCGCCTGAAGGATGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGALLIMAILLLAGIIYLFTSIA LLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMIHKILLSTHGTRH
Sequences:
>Translated_132_residues MSHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGALLIMAILLLAGIIYLFTSIA LLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMIHKILLSTHGTRH >Mature_131_residues SHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGALLIMAILLLAGIIYLFTSIAL LVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMIHKILLSTHGTRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14729; Mature: 14598
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGA CCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIMAILLLAGIIYLFTSIALLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKILLSTHGTRH HHHHHHHCCCCC >Mature Secondary Structure SHFFSREKQKPATGRDEPGIAELISNTITESYDDLLDIIDAKAELIKIELTEKLAIVGA CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIMAILLLAGIIYLFTSIALLVGELLGHMYLGYLILSSCFLLCVLFFTKIRPSLLKNMI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HKILLSTHGTRH HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA