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The map label for this gene is lpsE [H]

Identifier: 194333199

GI number: 194333199

Start: 390699

End: 391793

Strand: Reverse

Name: lpsE [H]

Synonym: Paes_0355

Alternate gene names: 194333199

Gene position: 391793-390699 (Counterclockwise)

Preceding gene: 194333200

Following gene: 194333198

Centisome position: 15.59

GC content: 51.14

Gene sequence:

>1095_bases
ATGAATATCGTCTTTATCAACTCTATCGGACGCAATAAATTCGGAGGCGGAGAAAAATGGATGACCAATGCGGCAGGAAA
CCTTGCCCGTAAAGGTCACCATGTCATCCTTGCTGGCAAAAAAAACTCCCGTATACTCAACTATGCCGCCCAACAGGGTA
TCGAAACAGCCGTTATTGAAATCCGTTCCGACATCAGTCCGCTGACAACAGCCCGTATTGCCCGATGGCTGAAAGAGCAC
AGAACCGATATTCTGATCTGCAACCTCAACAAGGACGTACGTGTCGCCGGCCTTGCCGCACGCATTGCCGGTACACCGGT
CGTATTGGCACGCCACGGGATGCTGCTCTGCAGTCGGAAATGGAAACACAAGCTTACGCTGACAAAACTGACCGATGGCA
TTATCACCAACAGCAGAACCATCCGGGAAACCTATTCCGGCTACGGCTGGTTTCCGACTGATTTTGTCAAGGTCATCTAC
AACGGGCTCACGATTCCCGAGAAGGTTGACGCTGTGGATTTTTCACAACGTTTCCCGGGAAAAAAAATCATCTGCAGTGC
CGGAAGGCTATCTGAACAGAAAGGGTTCGGCGACCTGATCGATACAGCGGCAATCATCAGGAAAAACCGCGACGATATTG
TCTTTCTGGTATCGGGTGAAGGAAAGCTGGAAAGTGAACTGAAGACGAAAGTCAGGGATCTCGGGCTGGAGGGATCATTC
ATTTTTGAAGGCTTTACACCGGATATTTTCCCTTGGCTCAAAGGATGTGACCTGTTTGTGCTGGCATCGCTCTTCGAAGG
CATGCCCAATGTGGTCATGGAGGCGATGGCGATGTCCAAACCCGTTATCACTACCGATGTCAACGGCGCACGCGAATTGA
TGGAAGACGAAAAAACCGGCCTTATCGTTCCCCCCTCGGATCCGGAGGCGATGGCCTCGGTCATTGTGTCGATCATCGAC
GACGATCGCCGTCTTGCAACGATGGGATCTCTGGGAAAGCAGCGTGTCGCAAAACACTTCACCACAGAAAAAATGGCCGA
AAACCTCGAGGCGCACCTTCTTGAAAAGCTCCGACGCAAAGGGATCAGAAAATGA

Upstream 100 bases:

>100_bases
CGGGCCGTCACAACCGTCATGGAACGCTATTCCATGCAGAAAATTCTCCATGAAATCATAGATTTCTGCCAAACAGCATA
AGGATAACAAAAGAAAATCG

Downstream 100 bases:

>100_bases
CCAGAGACTGGAAAAAAAAGAGGCGCTTCCGCAAAGCCCTGGCTCGATCCCTGCAAATAATTTCACGAAGAAATGAACGT
GTTCCGCCATACCAGGGCCC

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MNIVFINSIGRNKFGGGEKWMTNAAGNLARKGHHVILAGKKNSRILNYAAQQGIETAVIEIRSDISPLTTARIARWLKEH
RTDILICNLNKDVRVAGLAARIAGTPVVLARHGMLLCSRKWKHKLTLTKLTDGIITNSRTIRETYSGYGWFPTDFVKVIY
NGLTIPEKVDAVDFSQRFPGKKIICSAGRLSEQKGFGDLIDTAAIIRKNRDDIVFLVSGEGKLESELKTKVRDLGLEGSF
IFEGFTPDIFPWLKGCDLFVLASLFEGMPNVVMEAMAMSKPVITTDVNGARELMEDEKTGLIVPPSDPEAMASVIVSIID
DDRRLATMGSLGKQRVAKHFTTEKMAENLEAHLLEKLRRKGIRK

Sequences:

>Translated_364_residues
MNIVFINSIGRNKFGGGEKWMTNAAGNLARKGHHVILAGKKNSRILNYAAQQGIETAVIEIRSDISPLTTARIARWLKEH
RTDILICNLNKDVRVAGLAARIAGTPVVLARHGMLLCSRKWKHKLTLTKLTDGIITNSRTIRETYSGYGWFPTDFVKVIY
NGLTIPEKVDAVDFSQRFPGKKIICSAGRLSEQKGFGDLIDTAAIIRKNRDDIVFLVSGEGKLESELKTKVRDLGLEGSF
IFEGFTPDIFPWLKGCDLFVLASLFEGMPNVVMEAMAMSKPVITTDVNGARELMEDEKTGLIVPPSDPEAMASVIVSIID
DDRRLATMGSLGKQRVAKHFTTEKMAENLEAHLLEKLRRKGIRK
>Mature_364_residues
MNIVFINSIGRNKFGGGEKWMTNAAGNLARKGHHVILAGKKNSRILNYAAQQGIETAVIEIRSDISPLTTARIARWLKEH
RTDILICNLNKDVRVAGLAARIAGTPVVLARHGMLLCSRKWKHKLTLTKLTDGIITNSRTIRETYSGYGWFPTDFVKVIY
NGLTIPEKVDAVDFSQRFPGKKIICSAGRLSEQKGFGDLIDTAAIIRKNRDDIVFLVSGEGKLESELKTKVRDLGLEGSF
IFEGFTPDIFPWLKGCDLFVLASLFEGMPNVVMEAMAMSKPVITTDVNGARELMEDEKTGLIVPPSDPEAMASVIVSIID
DDRRLATMGSLGKQRVAKHFTTEKMAENLEAHLLEKLRRKGIRK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=203, Percent_Identity=30.5418719211823, Blast_Score=69, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 40395; Mature: 40395

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVFINSIGRNKFGGGEKWMTNAAGNLARKGHHVILAGKKNSRILNYAAQQGIETAVIE
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHH
IRSDISPLTTARIARWLKEHRTDILICNLNKDVRVAGLAARIAGTPVVLARHGMLLCSRK
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEHHCCHHEECCC
WKHKLTLTKLTDGIITNSRTIRETYSGYGWFPTDFVKVIYNGLTIPEKVDAVDFSQRFPG
HHHEEEHHHHHCCHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
KKIICSAGRLSEQKGFGDLIDTAAIIRKNRDDIVFLVSGEGKLESELKTKVRDLGLEGSF
CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
IFEGFTPDIFPWLKGCDLFVLASLFEGMPNVVMEAMAMSKPVITTDVNGARELMEDEKTG
EECCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCC
LIVPPSDPEAMASVIVSIIDDDRRLATMGSLGKQRVAKHFTTEKMAENLEAHLLEKLRRK
EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIRK
CCCC
>Mature Secondary Structure
MNIVFINSIGRNKFGGGEKWMTNAAGNLARKGHHVILAGKKNSRILNYAAQQGIETAVIE
CEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHH
IRSDISPLTTARIARWLKEHRTDILICNLNKDVRVAGLAARIAGTPVVLARHGMLLCSRK
HHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEHHCCHHEECCC
WKHKLTLTKLTDGIITNSRTIRETYSGYGWFPTDFVKVIYNGLTIPEKVDAVDFSQRFPG
HHHEEEHHHHHCCHHCCCHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHCCC
KKIICSAGRLSEQKGFGDLIDTAAIIRKNRDDIVFLVSGEGKLESELKTKVRDLGLEGSF
CEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCE
IFEGFTPDIFPWLKGCDLFVLASLFEGMPNVVMEAMAMSKPVITTDVNGARELMEDEKTG
EECCCCCHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCEEECCCHHHHHHHCCCCC
LIVPPSDPEAMASVIVSIIDDDRRLATMGSLGKQRVAKHFTTEKMAENLEAHLLEKLRRK
EEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GIRK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]