Click here to switch to the map view.

The map label for this gene is korA [H]

Identifier: 194333140

GI number: 194333140

Start: 315580

End: 317463

Strand: Reverse

Name: korA [H]

Synonym: Paes_0296

Alternate gene names: 194333140

Gene position: 317463-315580 (Counterclockwise)

Preceding gene: 194333141

Following gene: 194333139

Centisome position: 12.63

GC content: 51.65

Gene sequence:

>1884_bases
ATGAGTGACACTTCAATCTTAAACAACAAAGATATGGTAACTTCAAAAACTAGCGTGTCCGTTCTTTTTGCGGGCGACTC
TGGTGACGGTATGCAACTTACCGGTACCCAGTTTGCGAACACGGTCGCGGTCTACGGTACCGACCTTAATACGTTCCCGA
ACTTCCCGTCAGAAATCCGCGCTCCTGCAGGCACCATCTCCGGTGTTTCCGGCTTCCAGCTTCAGTTTGGCAGCAAGGCG
GTCTATACCCCTGGCGCTAAATTCGATGTCATGATCGCGATGAATGCAGCGGCTCTTAAAGCCAACCTGCATAACCTGCA
CCATGGCGGTCTCATTATCGCCAATACCGACGGGTTCGATGCAAAAAACCTCAAGCTGGCTGGTTATGGAGAAGAGAACA
ATCCGCTTGAAAACGGCACCGTAAAAGATTATACGGTTTTCGAGGTGCCTGTTGTCTCACTGACCCGTGCGGCGCTTGCC
GATACAGGACTCAGCACAAAAAACATAGATCGATGCAAAAATATGTTTGTGCTGGGCATTCTCTACTGGCTCTACAGCCT
TCCAATCGACACCACGATTGAAACCCTCCGCACCAAGTTCAGAAAAAAAGCTGACGTTGCTGAAGCAAATATCAAAGCAG
TTAAAGCCGGTTACAATTTCGGTGATGAAACAGAGATGTTTTCACAGCACGGCCGTTACAGTGTCGACCCCGCAGAAAAG
AAACCCGGTGTCTATCGCCGTGTTACAGGAAACGAAGCTTCTGCTATCGGCCTGACTGCAGCCGCAAAGAAAGCCGGTCT
TCAGCTCTTTCTGGGATCCTATCCGATTACCCCTGCGTCTGAAATCCTTCAGACCCTTGCAGGACTCAAAAAATGGGGTG
TCAAGACATTCCAGGCAGAAGATGAAATTGCAGGCGTTCTGACAAGTATCGGCGCATCATACGGCGGTGCACTTGCCGCG
ACCAACACCTCAGGACCGGGCCTTGCGCTGAAAGCCGAAGGTCTCGGACTGGCCATGATACTCGAAGTCCCTCTGGTAGT
CATAAACGTGCAGAGAGGCGGACCGTCAACCGGCCTGCCGACCAAGCCCGAACAGTCGGACCTCTTTATCGCCATGTACG
GCCGTCACGGCGACGCTCCGGTTCCGGTTATAGCCGCAACTTCACCGGTAGACTGTTTCTATGCCGCCTATGAAGCCGCA
AAAATCGCGGTAGAATATATGACGCCTGTCATTTGCCTTACCGATGGCTATCTCGCATTGAGTTCCGAACCCATGCGGGT
TCCTTCACCGGACGAACTGGCTTCCATTACAGCGAAATTCGCGAAAGAACGAAAAGCCGACGATCCCCCCTATCTTCCGT
ACAAGCGCGACGAACGTTGCGTGCGCGAATGGGCCAAGCCCGGCACTCCAGGCCTTGAGCACAGAATCGGTGGCCTTGAA
AAAGAGAATGAAACCGGTAACGTCTCGCACGATCCTGAAAACCATGCACTGATGACCCGACTTCGTGCAGAAAAAGTAGA
ACGTGTCGCCGATATCATTCCTCCGCTCGCGATCGATAACGGGCCTGAAAAAGGCGATCTGCTCGTCCTTGGCTGGGGCT
CTACCTACGGTGCGATCAAAATCGCGGTTGAACAGGCCATCGACAAAGGCTATAACGTTGCTCATGCGCATCTGCGCCAT
CTCAATCCATTCCCGAAAAATCTCGGAGAGGTTCTTGGCAACTACAAAAAGATTCTCATGCCTGAAAACAACAGCGGCCA
GCTCATTCATATGATCAGGGACAAGTTCCAGATCGAGCCTGTCGGCTTCAGCAAGGTTGAGGGTCTGCCGTTCAACGAGA
TGGAAATCGAAGCTAAAATCACTGATATTTTAAAGGAGCTTTAA

Upstream 100 bases:

>100_bases
ATATCACCACAGTCAATACCATGCTTAGAAATGAAGGTAACGATTCATTGGCTGGGGGATTTTTCGCGTTTTACTTTTTC
GAATCGCAAGAACACGAGTA

Downstream 100 bases:

>100_bases
ACTATGACCGATACACTGTCTAAACTGACTGCAAAAGACTTTACGTCAAATCAGGAACCCAAATGGTGTCCGGGCTGTGG
AGACTATTCCGTTCTGCATC

Product: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein

Products: NA

Alternate protein names: 2-ketoglutarate oxidoreductase alpha chain; KOR; 2-oxoglutarate-ferredoxin oxidoreductase subunit alpha [H]

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MSDTSILNNKDMVTSKTSVSVLFAGDSGDGMQLTGTQFANTVAVYGTDLNTFPNFPSEIRAPAGTISGVSGFQLQFGSKA
VYTPGAKFDVMIAMNAAALKANLHNLHHGGLIIANTDGFDAKNLKLAGYGEENNPLENGTVKDYTVFEVPVVSLTRAALA
DTGLSTKNIDRCKNMFVLGILYWLYSLPIDTTIETLRTKFRKKADVAEANIKAVKAGYNFGDETEMFSQHGRYSVDPAEK
KPGVYRRVTGNEASAIGLTAAAKKAGLQLFLGSYPITPASEILQTLAGLKKWGVKTFQAEDEIAGVLTSIGASYGGALAA
TNTSGPGLALKAEGLGLAMILEVPLVVINVQRGGPSTGLPTKPEQSDLFIAMYGRHGDAPVPVIAATSPVDCFYAAYEAA
KIAVEYMTPVICLTDGYLALSSEPMRVPSPDELASITAKFAKERKADDPPYLPYKRDERCVREWAKPGTPGLEHRIGGLE
KENETGNVSHDPENHALMTRLRAEKVERVADIIPPLAIDNGPEKGDLLVLGWGSTYGAIKIAVEQAIDKGYNVAHAHLRH
LNPFPKNLGEVLGNYKKILMPENNSGQLIHMIRDKFQIEPVGFSKVEGLPFNEMEIEAKITDILKEL

Sequences:

>Translated_627_residues
MSDTSILNNKDMVTSKTSVSVLFAGDSGDGMQLTGTQFANTVAVYGTDLNTFPNFPSEIRAPAGTISGVSGFQLQFGSKA
VYTPGAKFDVMIAMNAAALKANLHNLHHGGLIIANTDGFDAKNLKLAGYGEENNPLENGTVKDYTVFEVPVVSLTRAALA
DTGLSTKNIDRCKNMFVLGILYWLYSLPIDTTIETLRTKFRKKADVAEANIKAVKAGYNFGDETEMFSQHGRYSVDPAEK
KPGVYRRVTGNEASAIGLTAAAKKAGLQLFLGSYPITPASEILQTLAGLKKWGVKTFQAEDEIAGVLTSIGASYGGALAA
TNTSGPGLALKAEGLGLAMILEVPLVVINVQRGGPSTGLPTKPEQSDLFIAMYGRHGDAPVPVIAATSPVDCFYAAYEAA
KIAVEYMTPVICLTDGYLALSSEPMRVPSPDELASITAKFAKERKADDPPYLPYKRDERCVREWAKPGTPGLEHRIGGLE
KENETGNVSHDPENHALMTRLRAEKVERVADIIPPLAIDNGPEKGDLLVLGWGSTYGAIKIAVEQAIDKGYNVAHAHLRH
LNPFPKNLGEVLGNYKKILMPENNSGQLIHMIRDKFQIEPVGFSKVEGLPFNEMEIEAKITDILKEL
>Mature_626_residues
SDTSILNNKDMVTSKTSVSVLFAGDSGDGMQLTGTQFANTVAVYGTDLNTFPNFPSEIRAPAGTISGVSGFQLQFGSKAV
YTPGAKFDVMIAMNAAALKANLHNLHHGGLIIANTDGFDAKNLKLAGYGEENNPLENGTVKDYTVFEVPVVSLTRAALAD
TGLSTKNIDRCKNMFVLGILYWLYSLPIDTTIETLRTKFRKKADVAEANIKAVKAGYNFGDETEMFSQHGRYSVDPAEKK
PGVYRRVTGNEASAIGLTAAAKKAGLQLFLGSYPITPASEILQTLAGLKKWGVKTFQAEDEIAGVLTSIGASYGGALAAT
NTSGPGLALKAEGLGLAMILEVPLVVINVQRGGPSTGLPTKPEQSDLFIAMYGRHGDAPVPVIAATSPVDCFYAAYEAAK
IAVEYMTPVICLTDGYLALSSEPMRVPSPDELASITAKFAKERKADDPPYLPYKRDERCVREWAKPGTPGLEHRIGGLEK
ENETGNVSHDPENHALMTRLRAEKVERVADIIPPLAIDNGPEKGDLLVLGWGSTYGAIKIAVEQAIDKGYNVAHAHLRHL
NPFPKNLGEVLGNYKKILMPENNSGQLIHMIRDKFQIEPVGFSKVEGLPFNEMEIEAKITDILKEL

Specific function: Unknown

COG id: COG0674

COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002880
- InterPro:   IPR009014
- InterPro:   IPR015941
- InterPro:   IPR005476 [H]

Pfam domain/function: PF01855 POR_N; PF02780 Transketolase_C [H]

EC number: =1.2.7.3 [H]

Molecular weight: Translated: 67534; Mature: 67403

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTSILNNKDMVTSKTSVSVLFAGDSGDGMQLTGTQFANTVAVYGTDLNTFPNFPSEIR
CCCCCCCCCCCCEEECCEEEEEEECCCCCCEEEECCHHCCEEEEEECCCCCCCCCCHHHC
APAGTISGVSGFQLQFGSKAVYTPGAKFDVMIAMNAAALKANLHNLHHGGLIIANTDGFD
CCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEECHHHHHHHHHHCCCCCEEEEECCCCC
AKNLKLAGYGEENNPLENGTVKDYTVFEVPVVSLTRAALADTGLSTKNIDRCKNMFVLGI
CCCEEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LYWLYSLPIDTTIETLRTKFRKKADVAEANIKAVKAGYNFGDETEMFSQHGRYSVDPAEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHC
KPGVYRRVTGNEASAIGLTAAAKKAGLQLFLGSYPITPASEILQTLAGLKKWGVKTFQAE
CCCEEEEECCCCCCEEEEHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEECCH
DEIAGVLTSIGASYGGALAATNTSGPGLALKAEGLGLAMILEVPLVVINVQRGGPSTGLP
HHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCCCC
TKPEQSDLFIAMYGRHGDAPVPVIAATSPVDCFYAAYEAAKIAVEYMTPVICLTDGYLAL
CCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEE
SSEPMRVPSPDELASITAKFAKERKADDPPYLPYKRDERCVREWAKPGTPGLEHRIGGLE
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC
KENETGNVSHDPENHALMTRLRAEKVERVADIIPPLAIDNGPEKGDLLVLGWGSTYGAIK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCCEEE
IAVEQAIDKGYNVAHAHLRHLNPFPKNLGEVLGNYKKILMPENNSGQLIHMIRDKFQIEP
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHHEECC
VGFSKVEGLPFNEMEIEAKITDILKEL
CCCHHCCCCCCCCEEHHHHHHHHHHHC
>Mature Secondary Structure 
SDTSILNNKDMVTSKTSVSVLFAGDSGDGMQLTGTQFANTVAVYGTDLNTFPNFPSEIR
CCCCCCCCCCCEEECCEEEEEEECCCCCCEEEECCHHCCEEEEEECCCCCCCCCCHHHC
APAGTISGVSGFQLQFGSKAVYTPGAKFDVMIAMNAAALKANLHNLHHGGLIIANTDGFD
CCCCCCCCCCCEEEEECCEEEECCCCCEEEEEEECHHHHHHHHHHCCCCCEEEEECCCCC
AKNLKLAGYGEENNPLENGTVKDYTVFEVPVVSLTRAALADTGLSTKNIDRCKNMFVLGI
CCCEEEEECCCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LYWLYSLPIDTTIETLRTKFRKKADVAEANIKAVKAGYNFGDETEMFSQHGRYSVDPAEK
HHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHCCCCCCCHHHC
KPGVYRRVTGNEASAIGLTAAAKKAGLQLFLGSYPITPASEILQTLAGLKKWGVKTFQAE
CCCEEEEECCCCCCEEEEHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHHHHCCEEECCH
DEIAGVLTSIGASYGGALAATNTSGPGLALKAEGLGLAMILEVPLVVINVQRGGPSTGLP
HHHHHHHHHHHHCCCCEEEECCCCCCCEEEEECCCCEEEEEECCEEEEEEECCCCCCCCC
TKPEQSDLFIAMYGRHGDAPVPVIAATSPVDCFYAAYEAAKIAVEYMTPVICLTDGYLAL
CCCCCCCEEEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCEEEEECCEEEE
SSEPMRVPSPDELASITAKFAKERKADDPPYLPYKRDERCVREWAKPGTPGLEHRIGGLE
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCHHHHHCCCC
KENETGNVSHDPENHALMTRLRAEKVERVADIIPPLAIDNGPEKGDLLVLGWGSTYGAIK
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCEEEEECCCCCCEEE
IAVEQAIDKGYNVAHAHLRHLNPFPKNLGEVLGNYKKILMPENNSGQLIHMIRDKFQIEP
HHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCCCEEEEEHHHHEECC
VGFSKVEGLPFNEMEIEAKITDILKEL
CCCHHCCCCCCCCEEHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]