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The map label for this gene is recO

Identifier: 194333040

GI number: 194333040

Start: 200249

End: 201043

Strand: Reverse

Name: recO

Synonym: Paes_0194

Alternate gene names: 194333040

Gene position: 201043-200249 (Counterclockwise)

Preceding gene: 194333042

Following gene: 194333039

Centisome position: 8.0

GC content: 54.47

Gene sequence:

>795_bases
GTGCTCGTCAAAACAAGGGGCGTTATCCTCAAAGAGATCAAATTCAGGGACCAATCGAAGATCTGCCCTGTTTTCACCGA
ACATTTCGGAAAAATCTCGGTTATCCTCAAAGGCGTACGAAACCCCAAAAACAAACTCTCGGGAGTGTTCAGCACAGGCA
ACATGGTCGAGCTTGTCATCTACAAAAAACAGAACCGCGACCTGCACCTTGTCAGCGACGCGCTGCTCTTGCAAAGCCCG
ATGAGCGCCAGGCCCGATATGGAACGCTTTACCACAATCTATCAGCTCATTGAAACACTGAAGCAGGTGACCGGCAGCGA
GGAGCCTCATCCCGTGCTGTTCAGATTTCTGGCAGCTACGATTGAAGAGCTGTGCAAACCCGAAAGGGACTATCAGTTAG
TGCTCGCCTGGTTTCTGATCCGCCTTGTCACCGTTCTCGGCTTTGAGCCGGAGCTCGAACAATGCGTCATCTCCGGCGAA
CCGCTCATCCCTGCTGCCGAAGCCATGGCTCCCGATGAAAATCTCTACTTCCTTTTTGACCCTGGCGGCATCGCATTTGC
TGGCCCCTCCGCTTTGATCAGATCGGAGAAAAGGGCTCTTCCCGCACTCTCCTTCCGGCTGTTGCGCTGGCTGTCGCGCC
AGAACATCGACGCACTGCCCGACATCCGCATCCCCGAAGAACATCCTCGCCGCCTTTGCGAACTCCTGCAGGACTACTGC
GCTGTTCATATTGATCATAACCCGCCTGTCAGAAACCGCCGCATCATCTCCCAGATCCGTCCGGACAACACCTGA

Upstream 100 bases:

>100_bases
ATGAAGAAGCAACCCCGGGAGTTTGCTCCTCTATAAACATTCCTTTTGGAATCAAAGTTTAGTATATAGCTATATTTTCA
AAAATAAAAAAGCAGGCGCT

Downstream 100 bases:

>100_bases
TATCGCGATTTTCGCCGACACTCCCGACAATACAGTCTGACGGACATGTACCATTGATTGTTCAACGAATTCCTTTCCGT
CTCAAATCCCGTTGCAGTGA

Product: DNA repair protein RecO

Products: NA

Alternate protein names: Recombination protein O

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MLVKTRGVILKEIKFRDQSKICPVFTEHFGKISVILKGVRNPKNKLSGVFSTGNMVELVIYKKQNRDLHLVSDALLLQSP
MSARPDMERFTTIYQLIETLKQVTGSEEPHPVLFRFLAATIEELCKPERDYQLVLAWFLIRLVTVLGFEPELEQCVISGE
PLIPAAEAMAPDENLYFLFDPGGIAFAGPSALIRSEKRALPALSFRLLRWLSRQNIDALPDIRIPEEHPRRLCELLQDYC
AVHIDHNPPVRNRRIISQIRPDNT

Sequences:

>Translated_264_residues
MLVKTRGVILKEIKFRDQSKICPVFTEHFGKISVILKGVRNPKNKLSGVFSTGNMVELVIYKKQNRDLHLVSDALLLQSP
MSARPDMERFTTIYQLIETLKQVTGSEEPHPVLFRFLAATIEELCKPERDYQLVLAWFLIRLVTVLGFEPELEQCVISGE
PLIPAAEAMAPDENLYFLFDPGGIAFAGPSALIRSEKRALPALSFRLLRWLSRQNIDALPDIRIPEEHPRRLCELLQDYC
AVHIDHNPPVRNRRIISQIRPDNT
>Mature_264_residues
MLVKTRGVILKEIKFRDQSKICPVFTEHFGKISVILKGVRNPKNKLSGVFSTGNMVELVIYKKQNRDLHLVSDALLLQSP
MSARPDMERFTTIYQLIETLKQVTGSEEPHPVLFRFLAATIEELCKPERDYQLVLAWFLIRLVTVLGFEPELEQCVISGE
PLIPAAEAMAPDENLYFLFDPGGIAFAGPSALIRSEKRALPALSFRLLRWLSRQNIDALPDIRIPEEHPRRLCELLQDYC
AVHIDHNPPVRNRRIISQIRPDNT

Specific function: Involved in DNA repair and recF pathway recombination

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECO_PROA2 (B4S3Q7)

Other databases:

- EMBL:   CP001108
- RefSeq:   YP_002014900.1
- GeneID:   6459606
- GenomeReviews:   CP001108_GR
- KEGG:   paa:Paes_0194
- HOGENOM:   HBG405049
- OMA:   RDQSKIC
- ProtClustDB:   CLSK638084
- HAMAP:   MF_00201
- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717
- TIGRFAMs:   TIGR00613

Pfam domain/function: PF02565 RecO; PF11967 RecO_N; SSF57863 ArfGAP; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 30179; Mature: 30179

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVKTRGVILKEIKFRDQSKICPVFTEHFGKISVILKGVRNPKNKLSGVFSTGNMVELVI
CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCEEECCCCEEEEEE
YKKQNRDLHLVSDALLLQSPMSARPDMERFTTIYQLIETLKQVTGSEEPHPVLFRFLAAT
EECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IEELCKPERDYQLVLAWFLIRLVTVLGFEPELEQCVISGEPLIPAAEAMAPDENLYFLFD
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHCCCCCCEEEEEC
PGGIAFAGPSALIRSEKRALPALSFRLLRWLSRQNIDALPDIRIPEEHPRRLCELLQDYC
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
AVHIDHNPPVRNRRIISQIRPDNT
EEECCCCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MLVKTRGVILKEIKFRDQSKICPVFTEHFGKISVILKGVRNPKNKLSGVFSTGNMVELVI
CCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCEEECCCCEEEEEE
YKKQNRDLHLVSDALLLQSPMSARPDMERFTTIYQLIETLKQVTGSEEPHPVLFRFLAAT
EECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
IEELCKPERDYQLVLAWFLIRLVTVLGFEPELEQCVISGEPLIPAAEAMAPDENLYFLFD
HHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCHHHHCCCCCCEEEEEC
PGGIAFAGPSALIRSEKRALPALSFRLLRWLSRQNIDALPDIRIPEEHPRRLCELLQDYC
CCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH
AVHIDHNPPVRNRRIISQIRPDNT
EEECCCCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA