Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194332965
Identifier: 194332965
GI number: 194332965
Start: 122295
End: 122906
Strand: Reverse
Name: 194332965
Synonym: Paes_0118
Alternate gene names: NA
Gene position: 122906-122295 (Counterclockwise)
Preceding gene: 194332966
Following gene: 194332964
Centisome position: 4.89
GC content: 46.57
Gene sequence:
>612_bases ATGGAAATGGAAGCGACCGGTAAAAGCAAAGGCGAATGGATCTTCCACGCAGAGTTTCATGAAACGATCGATTATCTGTC CGATCATGCCAGGATACTGGCATTCAATCCGTTTTGTCATAAGGTTGAAAAAACAGCCAAAACAAATGTTTACAAATGGC ATTTCCGGGTAACCGACCCGCAGAACAACCCGTTTGACGTCATATTCTACATCGAAGAGATCCAGGAACTGCTGGTTGAA CTCCCTGACGAGTATGACAACATCGACCCTGAAACCATTCCTGAAGATATCATCAGCAAGCATACCGTCGGCAGAAAAAT CACCTGGGCGCACCATCCCTGGGACAACACTATCGATGATCCGAAAAACTATATTTTCGAAGGAAGAGCATTTGCCGAAA TGTATGTCAAGCCACACAGCAACGCCCAGACCATGGTCGACTTCGATCTCCGGGTAGACGTCAAATTCACCCTGTACCCC GCCTTCCGGATCATCCCTGAAACCATCATCAGAAGCATGACCAACGCAGGAATGTCTTTTATCATGCAATCGGCAACCGA TAAAATGTTCAAAAGCATTTCTAAAGACTTCCGCCCGATTCAACAGGCCTGA
Upstream 100 bases:
>100_bases ACACAAGAACCAATGATATCCTGTCTGAATCGGAGAACGCAAGGTCTGATTCAGGCAGATGCCAAGTACGATACAACCCG GAGACCCTGGAGAGAGCACT
Downstream 100 bases:
>100_bases AGCCGACCGACGGGAATCCCCGATAACCAAACATCATCACGCTTCATTGGCAAAGGACACCCAACAGTTCATCACGCTTC GCCGCTTTTCGATATCCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MEMEATGKSKGEWIFHAEFHETIDYLSDHARILAFNPFCHKVEKTAKTNVYKWHFRVTDPQNNPFDVIFYIEEIQELLVE LPDEYDNIDPETIPEDIISKHTVGRKITWAHHPWDNTIDDPKNYIFEGRAFAEMYVKPHSNAQTMVDFDLRVDVKFTLYP AFRIIPETIIRSMTNAGMSFIMQSATDKMFKSISKDFRPIQQA
Sequences:
>Translated_203_residues MEMEATGKSKGEWIFHAEFHETIDYLSDHARILAFNPFCHKVEKTAKTNVYKWHFRVTDPQNNPFDVIFYIEEIQELLVE LPDEYDNIDPETIPEDIISKHTVGRKITWAHHPWDNTIDDPKNYIFEGRAFAEMYVKPHSNAQTMVDFDLRVDVKFTLYP AFRIIPETIIRSMTNAGMSFIMQSATDKMFKSISKDFRPIQQA >Mature_203_residues MEMEATGKSKGEWIFHAEFHETIDYLSDHARILAFNPFCHKVEKTAKTNVYKWHFRVTDPQNNPFDVIFYIEEIQELLVE LPDEYDNIDPETIPEDIISKHTVGRKITWAHHPWDNTIDDPKNYIFEGRAFAEMYVKPHSNAQTMVDFDLRVDVKFTLYP AFRIIPETIIRSMTNAGMSFIMQSATDKMFKSISKDFRPIQQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23867; Mature: 23867
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMEATGKSKGEWIFHAEFHETIDYLSDHARILAFNPFCHKVEKTAKTNVYKWHFRVTDP CCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEEEEEEEECC QNNPFDVIFYIEEIQELLVELPDEYDNIDPETIPEDIISKHTVGRKITWAHHPWDNTIDD CCCCEEEEEEHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCC PKNYIFEGRAFAEMYVKPHSNAQTMVDFDLRVDVKFTLYPAFRIIPETIIRSMTNAGMSF CHHHEECCCEEEEEEECCCCCCCEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHH IMQSATDKMFKSISKDFRPIQQA HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEMEATGKSKGEWIFHAEFHETIDYLSDHARILAFNPFCHKVEKTAKTNVYKWHFRVTDP CCCCCCCCCCCCEEEEHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCEEEEEEEEECC QNNPFDVIFYIEEIQELLVELPDEYDNIDPETIPEDIISKHTVGRKITWAHHPWDNTIDD CCCCEEEEEEHHHHHHHHHHCCHHHCCCCCCCCCHHHHHHHCCCCEEEEEECCCCCCCCC PKNYIFEGRAFAEMYVKPHSNAQTMVDFDLRVDVKFTLYPAFRIIPETIIRSMTNAGMSF CHHHEECCCEEEEEEECCCCCCCEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHHHHH IMQSATDKMFKSISKDFRPIQQA HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA