Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194332940
Identifier: 194332940
GI number: 194332940
Start: 91813
End: 92808
Strand: Reverse
Name: 194332940
Synonym: Paes_0093
Alternate gene names: NA
Gene position: 92808-91813 (Counterclockwise)
Preceding gene: 194332948
Following gene: 194332937
Centisome position: 3.69
GC content: 53.11
Gene sequence:
>996_bases ATGCCATTTCGTACCGGGCATTATCTTTTCCGCCTCCTCAACCAATCACTCAACCATACCGACATGAGAAAATTCATTGT TTCAGCGACCTTTGCGCTGCTGCTGCTCCTGCATCAGTCCGCATGTTTCGCGGCCATCAACCAGTTTACGGGAACATGGG CGAACACCGACCAGAACACGAGAGGCATCACCAGACTTGAAATCAAACAGCAGGGATCAGCCATCAAACTGCACGCATGG GGCAAATGCCACCCGCAGGATTGCGACTGGGGCGAAGTCATGGCCAACGCCTATGCACCCAATGTCTCGTCGGACCTCAT GCAGTCCGCCCAGGCCATCTCGGCCGTGTTCAATACCAGTTTCAGCCAGACGCTGGTCATCGTCAGACCGAACGGAAAAA ACAAAGTGCGCGCAAACGTTTTCACACGATTCACCGACGGCAGCAAGCGCGCCAACTACACCTCCAGCTACACCTTCAAA CGGCAGTTCCAGGTAGCTCCGCTCGCGCCCCTGACGCCGATGCCGATGCCTGCTCCCGCAATTCAGGAAGACTGCATATC CTTCAATCCGGCAACGACAACGGTCAAATACATCAGCGGCAACTGGAAAATCGTCGATGGCAACCACTGGATGTTTGATT TCGGCAGCAAAAAAAACGAGGCGCTTAAAGCGCTTCAGATCATCAAACACTACCAGATGAACCGCTCATGTTTCGTCGGC CGTCCCGATCCGAGCTTCCAGTACATGCTTGTTTCCGGCAACGCACCTCAGGGGGGAATGCAGGGTGAAGACTGCGTCAG CTTCAACCCGAACACCATTCAGGTCAAAAACATCAACGGCAGATGGAAAATCGTCGACGGCAATCACTGGGTGTTTGATT TCGACACCAAGGAAGACGAAGCAAGAAAAGCCTTTGCCATCATCAAAAAATACGGATTTACCCGCTCATGCTTTGTCGGT CGTCCCGACCCGAGCTTCCAGTACCTCAGAAAGTAA
Upstream 100 bases:
>100_bases ACCAGACACCAGTCTAAGAGGTTCCTGCTCAAAGCTATATGCTTTTCTCCGCCACAACAAATTAATTGTTTTTAAGCGTA TGATACCCTAATTTTTCACT
Downstream 100 bases:
>100_bases AACAGCACCTCGCTGAGTCAGCGTCAACCGGGTTCCTGCATCGTCAGAGACCCGGTTTTTTATTGCCCGCCATCGTCTGA GTCAAACTCGAGAACGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 331; Mature: 330
Protein sequence:
>331_residues MPFRTGHYLFRLLNQSLNHTDMRKFIVSATFALLLLLHQSACFAAINQFTGTWANTDQNTRGITRLEIKQQGSAIKLHAW GKCHPQDCDWGEVMANAYAPNVSSDLMQSAQAISAVFNTSFSQTLVIVRPNGKNKVRANVFTRFTDGSKRANYTSSYTFK RQFQVAPLAPLTPMPMPAPAIQEDCISFNPATTTVKYISGNWKIVDGNHWMFDFGSKKNEALKALQIIKHYQMNRSCFVG RPDPSFQYMLVSGNAPQGGMQGEDCVSFNPNTIQVKNINGRWKIVDGNHWVFDFDTKEDEARKAFAIIKKYGFTRSCFVG RPDPSFQYLRK
Sequences:
>Translated_331_residues MPFRTGHYLFRLLNQSLNHTDMRKFIVSATFALLLLLHQSACFAAINQFTGTWANTDQNTRGITRLEIKQQGSAIKLHAW GKCHPQDCDWGEVMANAYAPNVSSDLMQSAQAISAVFNTSFSQTLVIVRPNGKNKVRANVFTRFTDGSKRANYTSSYTFK RQFQVAPLAPLTPMPMPAPAIQEDCISFNPATTTVKYISGNWKIVDGNHWMFDFGSKKNEALKALQIIKHYQMNRSCFVG RPDPSFQYMLVSGNAPQGGMQGEDCVSFNPNTIQVKNINGRWKIVDGNHWVFDFDTKEDEARKAFAIIKKYGFTRSCFVG RPDPSFQYLRK >Mature_330_residues PFRTGHYLFRLLNQSLNHTDMRKFIVSATFALLLLLHQSACFAAINQFTGTWANTDQNTRGITRLEIKQQGSAIKLHAWG KCHPQDCDWGEVMANAYAPNVSSDLMQSAQAISAVFNTSFSQTLVIVRPNGKNKVRANVFTRFTDGSKRANYTSSYTFKR QFQVAPLAPLTPMPMPAPAIQEDCISFNPATTTVKYISGNWKIVDGNHWMFDFGSKKNEALKALQIIKHYQMNRSCFVGR PDPSFQYMLVSGNAPQGGMQGEDCVSFNPNTIQVKNINGRWKIVDGNHWVFDFDTKEDEARKAFAIIKKYGFTRSCFVGR PDPSFQYLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37454; Mature: 37323
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRTGHYLFRLLNQSLNHTDMRKFIVSATFALLLLLHQSACFAAINQFTGTWANTDQNT CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RGITRLEIKQQGSAIKLHAWGKCHPQDCDWGEVMANAYAPNVSSDLMQSAQAISAVFNTS CCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC FSQTLVIVRPNGKNKVRANVFTRFTDGSKRANYTSSYTFKRQFQVAPLAPLTPMPMPAPA CCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCH IQEDCISFNPATTTVKYISGNWKIVDGNHWMFDFGSKKNEALKALQIIKHYQMNRSCFVG HHHHHHCCCCCCEEEEEEECCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEC RPDPSFQYMLVSGNAPQGGMQGEDCVSFNPNTIQVKNINGRWKIVDGNHWVFDFDTKEDE CCCCCEEEEEEECCCCCCCCCCCCEEECCCCEEEEEECCCEEEEEECCEEEEEECCCCHH ARKAFAIIKKYGFTRSCFVGRPDPSFQYLRK HHHHHHHHHHCCCCCEEECCCCCCCHHHHCC >Mature Secondary Structure PFRTGHYLFRLLNQSLNHTDMRKFIVSATFALLLLLHQSACFAAINQFTGTWANTDQNT CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC RGITRLEIKQQGSAIKLHAWGKCHPQDCDWGEVMANAYAPNVSSDLMQSAQAISAVFNTS CCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC FSQTLVIVRPNGKNKVRANVFTRFTDGSKRANYTSSYTFKRQFQVAPLAPLTPMPMPAPA CCCEEEEECCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCH IQEDCISFNPATTTVKYISGNWKIVDGNHWMFDFGSKKNEALKALQIIKHYQMNRSCFVG HHHHHHCCCCCCEEEEEEECCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEC RPDPSFQYMLVSGNAPQGGMQGEDCVSFNPNTIQVKNINGRWKIVDGNHWVFDFDTKEDE CCCCCEEEEEEECCCCCCCCCCCCEEECCCCEEEEEECCCEEEEEECCEEEEEECCCCHH ARKAFAIIKKYGFTRSCFVGRPDPSFQYLRK HHHHHHHHHHCCCCCEEECCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA