Definition | Prosthecochloris aestuarii DSM 271 chromosome, complete genome. |
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Accession | NC_011059 |
Length | 2,512,923 |
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The map label for this gene is 194332922
Identifier: 194332922
GI number: 194332922
Start: 79125
End: 79598
Strand: Reverse
Name: 194332922
Synonym: Paes_0074
Alternate gene names: NA
Gene position: 79598-79125 (Counterclockwise)
Preceding gene: 194332923
Following gene: 194332921
Centisome position: 3.17
GC content: 46.84
Gene sequence:
>474_bases ATGAAGAAATACAAAGTAAAGTTGACTCAAGAGGAACGCGAAGAGCTGGAGGCTATCAGCAGCAAGGGAAAGCATGCTGC CCAGACTGTCCTGAATGCGCTTATTCTTCTTGCATGCGACGAAGGGCAGTTCCAGAAGCAGCGTTCAATTAATGAAGAGA TCTCTCGGGTATTGAACGTAAGCATGAAAACCATTGACAGGGTTAAAAAACGCTTTGTTGAAGAGGGCTTTGAGGCCGTA CTCACCAGAAAACCATCGACGTACCAGTATCAAAGCAAAGTGGATGGCGATCTGGAAGCTCATTTGATTGCCTTATGTTG CTCAGACCCGCCAACCGGTTATAAGCGATGGTCCCTGCGTCTTTTGGCAGACAAGGCCGTTGAAATGGAATATGTTGATC GGATTTCCCATGAAACCGTCAGGCAGGCTTTAAAAAAAACGTCCTTAAGCCCTGGAAAACCGAAGGCTGGGTAA
Upstream 100 bases:
>100_bases ACGGCGGAGTTGGGAATACGACTAGCGTCATGTCAATAGCATAAAGTCGCATAAATATCTTATATTTCTTCATCGGTTTT CAACTCAAAAAGGAGTCGCG
Downstream 100 bases:
>100_bases TTCCGCCAGTACAGAATGGTGATTTTGTCGCACAAATGGAAGTGGTGCTGGACACCTACAAGTATCCGTATGATCCCTTG TATCGGGTACTCTGCATGGA
Product: transposase
Products: NA
Alternate protein names: Transposase And Inactivated Derivatives
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKKYKVKLTQEEREELEAISSKGKHAAQTVLNALILLACDEGQFQKQRSINEEISRVLNVSMKTIDRVKKRFVEEGFEAV LTRKPSTYQYQSKVDGDLEAHLIALCCSDPPTGYKRWSLRLLADKAVEMEYVDRISHETVRQALKKTSLSPGKPKAG
Sequences:
>Translated_157_residues MKKYKVKLTQEEREELEAISSKGKHAAQTVLNALILLACDEGQFQKQRSINEEISRVLNVSMKTIDRVKKRFVEEGFEAV LTRKPSTYQYQSKVDGDLEAHLIALCCSDPPTGYKRWSLRLLADKAVEMEYVDRISHETVRQALKKTSLSPGKPKAG >Mature_157_residues MKKYKVKLTQEEREELEAISSKGKHAAQTVLNALILLACDEGQFQKQRSINEEISRVLNVSMKTIDRVKKRFVEEGFEAV LTRKPSTYQYQSKVDGDLEAHLIALCCSDPPTGYKRWSLRLLADKAVEMEYVDRISHETVRQALKKTSLSPGKPKAG
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17840; Mature: 17840
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKYKVKLTQEEREELEAISSKGKHAAQTVLNALILLACDEGQFQKQRSINEEISRVLNV CCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SMKTIDRVKKRFVEEGFEAVLTRKPSTYQYQSKVDGDLEAHLIALCCSDPPTGYKRWSLR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHEECCCCCCCHHHHHHH LLADKAVEMEYVDRISHETVRQALKKTSLSPGKPKAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MKKYKVKLTQEEREELEAISSKGKHAAQTVLNALILLACDEGQFQKQRSINEEISRVLNV CCCEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH SMKTIDRVKKRFVEEGFEAVLTRKPSTYQYQSKVDGDLEAHLIALCCSDPPTGYKRWSLR HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHEECCCCCCCHHHHHHH LLADKAVEMEYVDRISHETVRQALKKTSLSPGKPKAG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA