| Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
|---|---|
| Accession | NC_011027 |
| Length | 2,289,249 |
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The map label for this gene is 193213513
Identifier: 193213513
GI number: 193213513
Start: 2063158
End: 2063421
Strand: Direct
Name: 193213513
Synonym: Cpar_1874
Alternate gene names: NA
Gene position: 2063158-2063421 (Clockwise)
Preceding gene: 193213509
Following gene: 193213514
Centisome position: 90.12
GC content: 50.76
Gene sequence:
>264_bases ATGAGCTGGGGAATCGAAGATCCGAAAAAGAGAAAAGACATCCTCGACCTGATGGACATCGGAATCAGGAAAAACATGGC CAATCCGAACCATGTCAACGAGGTGAAAAAGAGTGAGATCGGCTGCTGGATGGAGCAGATTTACGGCATCATGCGATGTG ACATCTGCGACCTGAGCAGCGAGTGCCCCGTCAGGGAGGAGCAGGAGTGGCAGGCCTGGCTGAAAGAGAACAATATGGTG GTCGAGAAGAAAAAAGAGCAATAG
Upstream 100 bases:
>100_bases GAGTGACAGGTAACAAGCGACATGGCCCAGGGAATCCACTCTATCCCAAAGGCTCCATCGTTACCATTCCTTCTCTCAAC CGTAAAGCGCAAGAGGCACC
Downstream 100 bases:
>100_bases CGCCCCCATCCTCTTGCATCAAGCCTTCAAGGACTTTATATTTAACAATTGGCAAAAATTTGCCTCGGGCTGAGCATTGT CTGCCCGAACCCTCCGTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSWGIEDPKKRKDILDLMDIGIRKNMANPNHVNEVKKSEIGCWMEQIYGIMRCDICDLSSECPVREEQEWQAWLKENNMV VEKKKEQ
Sequences:
>Translated_87_residues MSWGIEDPKKRKDILDLMDIGIRKNMANPNHVNEVKKSEIGCWMEQIYGIMRCDICDLSSECPVREEQEWQAWLKENNMV VEKKKEQ >Mature_86_residues SWGIEDPKKRKDILDLMDIGIRKNMANPNHVNEVKKSEIGCWMEQIYGIMRCDICDLSSECPVREEQEWQAWLKENNMVV EKKKEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10341; Mature: 10210
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 11.5 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 5.8 %Met (Mature Protein) 10.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWGIEDPKKRKDILDLMDIGIRKNMANPNHVNEVKKSEIGCWMEQIYGIMRCDICDLSS CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ECPVREEQEWQAWLKENNMVVEKKKEQ CCCCCCCHHHHHHHHCCCEEECCCCCC >Mature Secondary Structure SWGIEDPKKRKDILDLMDIGIRKNMANPNHVNEVKKSEIGCWMEQIYGIMRCDICDLSS CCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC ECPVREEQEWQAWLKENNMVVEKKKEQ CCCCCCCHHHHHHHHCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA