Click here to switch to the map view.

The map label for this gene is 193213272

Identifier: 193213272

GI number: 193213272

Start: 1780299

End: 1782500

Strand: Direct

Name: 193213272

Synonym: Cpar_1629

Alternate gene names: NA

Gene position: 1780299-1782500 (Clockwise)

Preceding gene: 193213271

Following gene: 193213273

Centisome position: 77.77

GC content: 58.76

Gene sequence:

>2202_bases
ATGAAAAAAACATCACTCATAGCCCTCCTTGCGCTGCTTTCCGCTACGGCAAAGGCAGAGGAAGAACCGACCCTGCTGGC
GCTCAACGTCTGGACGGGCCCGGAAATTACCGTCTCCGGCAAGAAAGGCGATCTGCTCAACAAGATCGCCGGAAAGGAGT
CCGAAGTGCTCAATCCGTCTCAAATGTCGGTTTATAAAATCATCAACATGATGCCATCGGTCAGCCAGCAGAGCGTCGAT
CCGTACGGACTGGCCGATACCGTGAACTACCACGAGGCGTTCCGCTTCCGCGGCGTCGAAGCGACCGCCGGCGGCGTTCC
GGCCACCACGGCCAACGTCGAGGGGCTGCCGGTCACCGGGCGGCCGGGCGGCGGCGCGACAATCTATGACCTCGAAAACA
TGGAGAACGTCGCGGTTTACAGCGGCGTCATGCCCGCGAACGTCGGCCTCGGCATCGCCGACGTGGGCGGCAAGATCGAC
ATGGAGATCAAGCGCCCCGAAAGTGAGTTCGGCGTGGCCTTCAAGCAGAGCATCGGCAGCCACAACTTCAGCCGCACCTA
CCTGCGCGTCGACACCGGCGATCTCGGCAGCGGCCTGAAAGCGTTCGTCTCGGGATCGACGAGCTATGCCGAAAAATGGA
AAGGATACGGCGCGAGCAACCGCAACAACCTGATGTTCGGCCTGACCGAGCAGTTCAGCGACAAGGTGAAACTCGAAGCC
TTCGCCACGTGGAGCAAGGGCAACATTCATCCATACAGAGCGCTGAGCTACGCGCAGATTCAGGATCTGGACAGCGCTTA
CGACACCGATTACAGCAACGACCCGACCGCCTACGACTACTACGGCTACAACAAAAACGAGTTCGAGGACTGGATGGTGA
TGGCCAACCTTGAAATCAAAACCGGCGAAAAGTCGAAGCTGAACGTCAAGCCCTACTACTGGAGCGACAAGGGCTACTAC
ATGGAAACCATCACGCTGCCGAACGGCTCGCCCAACATCCGCCGCTGGGACATCGACCACGACCTGAAGGGCATTCTGGC
CGAATACACCACCACCGTCGGCAACGTCGATCTCGACTTCGGCTACCTCTACCATACGCAGAAACGCCCCGGCCCGCCGA
ACTCGTGGAAGAACTACACGCTCAGCGGCAACACGCTCGTGTTCAGCAAATGGGCGATTCTCTCCAACGACTCCAGCCAC
GAGCTGCACGAGCCGTTCATCGAAGCGAAGTACCGTGTTGGCGACTGGACGCTCGAAGGCGGCGTAAAGTATGTCAACTA
CGCCCTGCCCTCGATCCTCACCTACACCACGACGGCAGGTGATGTCAGCTACGACGAAGCGATGGAATCGGCTACGCTCG
TCCCCTTCAAAAGCGCTGAAAGTACCAAAACCTTCAGCCGCCTGTTTCCCGATGCCCGGCTCACGCGCATGATCGGCAAC
AACACGTCACTCCACCTGGCTTATGGCGAGAGCTACGTCACGCACGTCGATATCTACCCCTACTACATCTCGCAGGCCGC
GCTGAACACGGTCATTCCGTTCGAGGAGCTGTGGGACAAGCGAGCCATGGAGATTTCCAGAAACGTCGAGCTCGGCATGA
AAATCACCGGCAACACCTGGAGTATCTCGCCCACGATTTACTACTCCAAACACAGCAACAAGCAGGCCGTCTTGTATGAT
ACTGACCTCGACGCGACCTACCCGATGAACAGCGCCGACGCCACCGGCTACGGCTTCGAGCTGGAGGGTGAATACAAGCC
GTCGAGCAAGCTCAAATGCTACGGATCGTTCTCGTGGAACCGCTTCTCGTTCGATCAGGCGATCTACTCCGACGCTACAG
GCTCGCTCATCGACGTCAAGGGAATGCAGGTACCCGACGCGCCGGAGTTCATGGCCAAGGGGCTGGTGAGCTACACGGTC
GGTGACGTCACCATCTCGCCGGTCGTGCGGTACATGTCATCGCGCTATGGCGACGTGCAGCACACCCAGAAGATCGACGG
CACGACGCTTTTCGACCTCGACCTCACCTGGAGCCGCCCGATTGCCGGACTGCGCAACGTGGACTGCTCGCTGTCGTTCA
TCAACCTGTTCGACACGAAATATGTCAGCATGATCAGCGCCTCCGACTACAAAACCCTGAAGACCTCCTACCAGCCCGGA
GCGCCCTTCACGGTGGTAGCATCGGTAGCGATCCATTACTGA

Upstream 100 bases:

>100_bases
CGGCTTTCACTCCGCCGGACTGCCCTGAATGAGAAGAGCAAAAGAGCATAACGGCATTTTTTTGTCCCCCGTTATAACCA
GAAATACACAACACACAACC

Downstream 100 bases:

>100_bases
TCGACGAACTTTTTTCGATGTGTTCTCCCCTGTTCTTTCTCCGTTACACTGCATCCCGGCGGCTGGTTCCCGCCGGGATT
TTATGCTTGAGGGTTCTATA

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Protein; Outer Membrane Receptor Protein; Nb-Dependent Receptor; NB-Dependent Receptor Domain Protein

Number of amino acids: Translated: 733; Mature: 733

Protein sequence:

>733_residues
MKKTSLIALLALLSATAKAEEEPTLLALNVWTGPEITVSGKKGDLLNKIAGKESEVLNPSQMSVYKIINMMPSVSQQSVD
PYGLADTVNYHEAFRFRGVEATAGGVPATTANVEGLPVTGRPGGGATIYDLENMENVAVYSGVMPANVGLGIADVGGKID
MEIKRPESEFGVAFKQSIGSHNFSRTYLRVDTGDLGSGLKAFVSGSTSYAEKWKGYGASNRNNLMFGLTEQFSDKVKLEA
FATWSKGNIHPYRALSYAQIQDLDSAYDTDYSNDPTAYDYYGYNKNEFEDWMVMANLEIKTGEKSKLNVKPYYWSDKGYY
METITLPNGSPNIRRWDIDHDLKGILAEYTTTVGNVDLDFGYLYHTQKRPGPPNSWKNYTLSGNTLVFSKWAILSNDSSH
ELHEPFIEAKYRVGDWTLEGGVKYVNYALPSILTYTTTAGDVSYDEAMESATLVPFKSAESTKTFSRLFPDARLTRMIGN
NTSLHLAYGESYVTHVDIYPYYISQAALNTVIPFEELWDKRAMEISRNVELGMKITGNTWSISPTIYYSKHSNKQAVLYD
TDLDATYPMNSADATGYGFELEGEYKPSSKLKCYGSFSWNRFSFDQAIYSDATGSLIDVKGMQVPDAPEFMAKGLVSYTV
GDVTISPVVRYMSSRYGDVQHTQKIDGTTLFDLDLTWSRPIAGLRNVDCSLSFINLFDTKYVSMISASDYKTLKTSYQPG
APFTVVASVAIHY

Sequences:

>Translated_733_residues
MKKTSLIALLALLSATAKAEEEPTLLALNVWTGPEITVSGKKGDLLNKIAGKESEVLNPSQMSVYKIINMMPSVSQQSVD
PYGLADTVNYHEAFRFRGVEATAGGVPATTANVEGLPVTGRPGGGATIYDLENMENVAVYSGVMPANVGLGIADVGGKID
MEIKRPESEFGVAFKQSIGSHNFSRTYLRVDTGDLGSGLKAFVSGSTSYAEKWKGYGASNRNNLMFGLTEQFSDKVKLEA
FATWSKGNIHPYRALSYAQIQDLDSAYDTDYSNDPTAYDYYGYNKNEFEDWMVMANLEIKTGEKSKLNVKPYYWSDKGYY
METITLPNGSPNIRRWDIDHDLKGILAEYTTTVGNVDLDFGYLYHTQKRPGPPNSWKNYTLSGNTLVFSKWAILSNDSSH
ELHEPFIEAKYRVGDWTLEGGVKYVNYALPSILTYTTTAGDVSYDEAMESATLVPFKSAESTKTFSRLFPDARLTRMIGN
NTSLHLAYGESYVTHVDIYPYYISQAALNTVIPFEELWDKRAMEISRNVELGMKITGNTWSISPTIYYSKHSNKQAVLYD
TDLDATYPMNSADATGYGFELEGEYKPSSKLKCYGSFSWNRFSFDQAIYSDATGSLIDVKGMQVPDAPEFMAKGLVSYTV
GDVTISPVVRYMSSRYGDVQHTQKIDGTTLFDLDLTWSRPIAGLRNVDCSLSFINLFDTKYVSMISASDYKTLKTSYQPG
APFTVVASVAIHY
>Mature_733_residues
MKKTSLIALLALLSATAKAEEEPTLLALNVWTGPEITVSGKKGDLLNKIAGKESEVLNPSQMSVYKIINMMPSVSQQSVD
PYGLADTVNYHEAFRFRGVEATAGGVPATTANVEGLPVTGRPGGGATIYDLENMENVAVYSGVMPANVGLGIADVGGKID
MEIKRPESEFGVAFKQSIGSHNFSRTYLRVDTGDLGSGLKAFVSGSTSYAEKWKGYGASNRNNLMFGLTEQFSDKVKLEA
FATWSKGNIHPYRALSYAQIQDLDSAYDTDYSNDPTAYDYYGYNKNEFEDWMVMANLEIKTGEKSKLNVKPYYWSDKGYY
METITLPNGSPNIRRWDIDHDLKGILAEYTTTVGNVDLDFGYLYHTQKRPGPPNSWKNYTLSGNTLVFSKWAILSNDSSH
ELHEPFIEAKYRVGDWTLEGGVKYVNYALPSILTYTTTAGDVSYDEAMESATLVPFKSAESTKTFSRLFPDARLTRMIGN
NTSLHLAYGESYVTHVDIYPYYISQAALNTVIPFEELWDKRAMEISRNVELGMKITGNTWSISPTIYYSKHSNKQAVLYD
TDLDATYPMNSADATGYGFELEGEYKPSSKLKCYGSFSWNRFSFDQAIYSDATGSLIDVKGMQVPDAPEFMAKGLVSYTV
GDVTISPVVRYMSSRYGDVQHTQKIDGTTLFDLDLTWSRPIAGLRNVDCSLSFINLFDTKYVSMISASDYKTLKTSYQPG
APFTVVASVAIHY

Specific function: Unknown

COG id: COG1629

COG function: function code P; Outer membrane receptor proteins, mostly Fe transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81358; Mature: 81358

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTSLIALLALLSATAKAEEEPTLLALNVWTGPEITVSGKKGDLLNKIAGKESEVLNPS
CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCCC
QMSVYKIINMMPSVSQQSVDPYGLADTVNYHEAFRFRGVEATAGGVPATTANVEGLPVTG
HHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCEEECC
RPGGGATIYDLENMENVAVYSGVMPANVGLGIADVGGKIDMEIKRPESEFGVAFKQSIGS
CCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHCCC
HNFSRTYLRVDTGDLGSGLKAFVSGSTSYAEKWKGYGASNRNNLMFGLTEQFSDKVKLEA
CCCCEEEEEEECCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEHHHCCCCEEEEE
FATWSKGNIHPYRALSYAQIQDLDSAYDTDYSNDPTAYDYYGYNKNEFEDWMVMANLEIK
EEEECCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEE
TGEKSKLNVKPYYWSDKGYYMETITLPNGSPNIRRWDIDHDLKGILAEYTTTVGNVDLDF
CCCCCEEEECCEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEECC
GYLYHTQKRPGPPNSWKNYTLSGNTLVFSKWAILSNDSSHELHEPFIEAKYRVGDWTLEG
EEEEECCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCCCHHHCHHHHCEEEECCEEECC
GVKYVNYALPSILTYTTTAGDVSYDEAMESATLVPFKSAESTKTFSRLFPDARLTRMIGN
CCEEEHHHHCHHEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHHHHCCCHHHHHHHCC
NTSLHLAYGESYVTHVDIYPYYISQAALNTVIPFEELWDKRAMEISRNVELGMKITGNTW
CCEEEEEECCCEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCEE
SISPTIYYSKHSNKQAVLYDTDLDATYPMNSADATGYGFELEGEYKPSSKLKCYGSFSWN
EECEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCC
RFSFDQAIYSDATGSLIDVKGMQVPDAPEFMAKGLVSYTVGDVTISPVVRYMSSRYGDVQ
EEEHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCHHEEEECCEEHHHHHHHHHHCCCCCH
HTQKIDGTTLFDLDLTWSRPIAGLRNVDCSLSFINLFDTKYVSMISASDYKTLKTSYQPG
HHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEHHCCHHHEEEECCCCHHHHCCCCCC
APFTVVASVAIHY
CCCEEEEEEEECC
>Mature Secondary Structure
MKKTSLIALLALLSATAKAEEEPTLLALNVWTGPEITVSGKKGDLLNKIAGKESEVLNPS
CCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEECCCCCCHHHHHCCCCCCCCCCC
QMSVYKIINMMPSVSQQSVDPYGLADTVNYHEAFRFRGVEATAGGVPATTANVEGLPVTG
HHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHHHHCCCCEECCCCCCCCCCCCCCEEECC
RPGGGATIYDLENMENVAVYSGVMPANVGLGIADVGGKIDMEIKRPESEFGVAFKQSIGS
CCCCCEEEEECCCCCCEEEECCCCCCCCCCEEEECCCEEEEEEECCCHHHHHHHHHHCCC
HNFSRTYLRVDTGDLGSGLKAFVSGSTSYAEKWKGYGASNRNNLMFGLTEQFSDKVKLEA
CCCCEEEEEEECCCCCCCHHHHHCCCCHHHHHHCCCCCCCCCCEEEEEHHHCCCCEEEEE
FATWSKGNIHPYRALSYAQIQDLDSAYDTDYSNDPTAYDYYGYNKNEFEDWMVMANLEIK
EEEECCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEEE
TGEKSKLNVKPYYWSDKGYYMETITLPNGSPNIRRWDIDHDLKGILAEYTTTVGNVDLDF
CCCCCEEEECCEEECCCCEEEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHCCCEEECC
GYLYHTQKRPGPPNSWKNYTLSGNTLVFSKWAILSNDSSHELHEPFIEAKYRVGDWTLEG
EEEEECCCCCCCCCCCCCEEECCCEEEEEEEEEECCCCCCHHHCHHHHCEEEECCEEECC
GVKYVNYALPSILTYTTTAGDVSYDEAMESATLVPFKSAESTKTFSRLFPDARLTRMIGN
CCEEEHHHHCHHEEEEECCCCCCHHHHHCCCEEEEECCCCCHHHHHHHCCCHHHHHHHCC
NTSLHLAYGESYVTHVDIYPYYISQAALNTVIPFEELWDKRAMEISRNVELGMKITGNTW
CCEEEEEECCCEEEEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCEE
SISPTIYYSKHSNKQAVLYDTDLDATYPMNSADATGYGFELEGEYKPSSKLKCYGSFSWN
EECEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCC
RFSFDQAIYSDATGSLIDVKGMQVPDAPEFMAKGLVSYTVGDVTISPVVRYMSSRYGDVQ
EEEHHHHHHCCCCCCEEEECCCCCCCCHHHHHCCHHEEEECCEEHHHHHHHHHHCCCCCH
HTQKIDGTTLFDLDLTWSRPIAGLRNVDCSLSFINLFDTKYVSMISASDYKTLKTSYQPG
HHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEHHCCHHHEEEECCCCHHHHCCCCCC
APFTVVASVAIHY
CCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA