Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213080
Identifier: 193213080
GI number: 193213080
Start: 1566876
End: 1567232
Strand: Direct
Name: 193213080
Synonym: Cpar_1433
Alternate gene names: NA
Gene position: 1566876-1567232 (Clockwise)
Preceding gene: 193213079
Following gene: 193213083
Centisome position: 68.44
GC content: 54.62
Gene sequence:
>357_bases ATGAAAGTTCTGATCCATCATATTTACGAATTCCGCAAAGGGCTGCGGAGTCTGGTAATGCACACCCTGCCCGTTGGAAA GATGGCCGAGGCGACAGCCAGATTGCGCAGGTTCGGCATCGACTACCACATTCATGCGGCTGGAACAAAGACGATCAACG TGTTTTTCGGCGCCCCGGAATGCGTGACGGTTGTCCGGTTGATCTGCGGGGAGAAGAAGCTCCGCGATCTGACACCGGAG GAGGATTTTGTGCTCGGCTCGATGCTCGGTTACGATATTCGCAAGCAGTGTGAACGGTATCTGAAAAAAAGCGCGATGGA CGCCACCAGCAAGCCGCTCATGCAGAAGTGCGCATGA
Upstream 100 bases:
>100_bases GGCAAGTGCGGCGGGATGAGGCACAAACGGTATGAGTGGATCAACTGACCCGGCCCTCCGGCATTCCCGCTCTTTCTCGA AAATTCACGAAACCACGACT
Downstream 100 bases:
>100_bases ACCCATTGAGTTGAGTGAATCTGCGCTTCATCGCCAGCATTATTTCTTCTGGCTGTTCTCCAGCGCCTTCTTCGAGATCG CCTCTTCGATGTCCGATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MKVLIHHIYEFRKGLRSLVMHTLPVGKMAEATARLRRFGIDYHIHAAGTKTINVFFGAPECVTVVRLICGEKKLRDLTPE EDFVLGSMLGYDIRKQCERYLKKSAMDATSKPLMQKCA
Sequences:
>Translated_118_residues MKVLIHHIYEFRKGLRSLVMHTLPVGKMAEATARLRRFGIDYHIHAAGTKTINVFFGAPECVTVVRLICGEKKLRDLTPE EDFVLGSMLGYDIRKQCERYLKKSAMDATSKPLMQKCA >Mature_118_residues MKVLIHHIYEFRKGLRSLVMHTLPVGKMAEATARLRRFGIDYHIHAAGTKTINVFFGAPECVTVVRLICGEKKLRDLTPE EDFVLGSMLGYDIRKQCERYLKKSAMDATSKPLMQKCA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13441; Mature: 13441
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 8.5 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 8.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLIHHIYEFRKGLRSLVMHTLPVGKMAEATARLRRFGIDYHIHAAGTKTINVFFGAPE CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEECCHH CVTVVRLICGEKKLRDLTPEEDFVLGSMLGYDIRKQCERYLKKSAMDATSKPLMQKCA HHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC >Mature Secondary Structure MKVLIHHIYEFRKGLRSLVMHTLPVGKMAEATARLRRFGIDYHIHAAGTKTINVFFGAPE CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEECCCCEEEEEEECCHH CVTVVRLICGEKKLRDLTPEEDFVLGSMLGYDIRKQCERYLKKSAMDATSKPLMQKCA HHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA