Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is feoB [H]
Identifier: 193213078
GI number: 193213078
Start: 1564168
End: 1566522
Strand: Direct
Name: feoB [H]
Synonym: Cpar_1431
Alternate gene names: 193213078
Gene position: 1564168-1566522 (Clockwise)
Preceding gene: 193213077
Following gene: 193213079
Centisome position: 68.33
GC content: 63.99
Gene sequence:
>2355_bases ATGGAACTGGCTGCACAGAAACAACGGACGAGCGCGAAGGCTCTGGCCTCGCCGCTCCAGCGAATCGTGGCCGTGGTGGG CAATCCCAACTGTGGCAAGACGACGCTCTTCAACGCCCTGACCGGGCTGAACCAGCGGGTCGGCAACTGGCCGGGCGTGA CGGTCGATAAAAAGACAGGGCGCTTCCGCCACGACGGCGAGGAATACGAGCTGGTCGATCTGCCCGGCATCTACTCGCTC TCGTCGCTTTCGCAGGACGAAGAGGTGGCGCGAAGCTACATCCTCTCCGGGGAGGCGGGACTTGTCGTCAACATCGTCGA TGCCTCGAATCCCGACCGAAACCTCTACCTCACCAGCCGTCTGCTCGAAATGGGCGTGCCAGTAGTGGTGGCGCTCAACA TGGTCGATTCGGCGGAAGAGCGCGGCATTTCGGTCGATCCGGCGCGGCTCTCGTCGCTGCTCGGCTGTCCGGTCATTCCG ATGGTGGCGTCGCGCGGCGAAGGAGTCGCGGAGCTGAAAGCGGCCATCGCGAAAGGGTTTACGACCGGCGGGGCTTCCGC GCCTGGATCGAAGGTGCGCTTTCCAGCGGAGCTTGACGAGGCGATCCGACGGGTTGCCGAATCGACCGCCAACCACGCTC GCGCTTTCGGCTACGATCCCGGCTGGTTCGCCATGAAGCTGCTCGAACACGACCACGAGCTGGAGGCGCGGCTCGACGGT GCGACCCGTTCGTCGCTCGCCGAGGAGCGGGAGCGGACTGCCGATGCGCTTGGCGACGATCCCGACATCGTCATCGCCGA TGCGCACTACCGGCTCGTCTCCGACCTTTCGGCGGCAGCCATCACCCGCAAGGAGAGCACCGAAAAGTCGCTCTCCGACA AGATCGACTCGCTGGTGCTGAACCGCTTTCTCGGCATTCCGCTCTTCCTTGGCGTAATGTACCTGATGTTCCTCTTTACG ATCAATCTCGGCGGTGCGTTCATCGACTTTTTCGACATCGCCGCCGGTGCGCTCTTCGTCGATGGATTCGGTCGCGTACT CGGAGCGGTCGGTTCGCCCGAATGGCTCACGGTGCTGCTCGCCAGCGGCGTTGGCGGGGCGTTGCAGACGATGGCCACCT TCATTCCGCCCATCGGCTTCATGTTCATCTTCCTGTCGATTCTCGAAGACTCCGGCTACATGGCCCGCGCGGCATACGTG ATGGATCGCGGGATGCGGGCCGTCGGCCTGCCCGGCAAGGCGTTCATTCCGCTGCTGGTCGGCTTCGGCTGCAACGTTCC GGCGATCATGTCCGCCCGCACGATGAGCGACGAGCGCGACCGAATCATGACGGTGATGATGACGCCGTTCATGTCTTGCG GCGCGAGGATGCCGGTCTATGCGCTCTTTGCGGCGGCCTTCTTCCCGACCGGCGGGCAGAACCTTGTGTTTCTGCTCTAC CTGATGGGCATCGCCGTGGCGATCATGACCGGCTTCATCCTCAAAAAAACGCTGCTCAAAGGTGATCCGTCCCCCTTCAT CATGGAGATGCCGCCCTACCACCTGCCGACCTTCAAAGGCGTTGCGCTCCGCGTCGGCGACCGGCTCGGCTCGTTCCTTG TCAAGGCAGGCAAGGTGCTGGTACCGGTGATCGTGGTGCTCGGCTTCATGAACTCCATCGGCACCGACGGCAGCTTCGGC AACGAGGAGAGCGACAACTCCGTGCTTGCCGCCACCGGCAAGGCGCTCGTGCCGGTGTTCCAGCCCTTCGGCGTGCAGGA GGAGAACTGGCCCGCCGCCGTCGGTCTCTTCACCGGCGTCTTCGCCAAGGAGGCGGTGGTCGGCACGCTCGACAATCTCT ACGCGGCGATGGATGCGAACGACATGGCTGACGGTTCAGACGAAGGCTTCAGCCTCATGGCGAGCCTCGGCGAAGCGTTC GCCACGATTCCGGAGAATCTGGCGGGCATCGCCGGATCGCTGCTCGATCCGCTTGGCATCAACGTCGGCGACCGGGGCGC GGTGGCCGAGGAGCAGGGTGTCGGCTCATCGATCTTCGGCTCGATGGTCAATCTCTTCGACGGCACGGCGGGGGCGTTCG CCTACCTGGTGTTCATCCTGCTCTACTTCCCGTGCGTGGCGGCCATCGCAGCGGTCTATCGCGAAACCAACCTCGCCTGG ACGCTCTTCGCCGGAGCGTGGACGACAGGCCTGGCCTACGTCTTCGCCGTGCTCAGCTACCAGATCGGCACGTGGGGAGC GCACCCCGGCACCTCCGCCGCATGGGTCGCGGTGATGTTGTTGGTGCTTGCCGTCGCGGTGACGCTGATGTATCTGGCCG GGAACGGTGCATTTTCGAAGAGAGAAGGTGCGTGA
Upstream 100 bases:
>100_bases TCGCGCCGTTGGGTGATCCGGTCGAGATGACCGTTCGCCGCTATCGGCTGTCACTGCGCAAGTCCGACATCGAGAACATC ACGGTCGAGGAGGTGCGCTG
Downstream 100 bases:
>100_bases TTCTGATGACGATGGCGGGAGAATCTCCCACTCTCCCGCCATTGCAACCTTTTTACAACAGCCATAACCTTTTACAATCA TGAGCTTAACTGATATTCGA
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MELAAQKQRTSAKALASPLQRIVAVVGNPNCGKTTLFNALTGLNQRVGNWPGVTVDKKTGRFRHDGEEYELVDLPGIYSL SSLSQDEEVARSYILSGEAGLVVNIVDASNPDRNLYLTSRLLEMGVPVVVALNMVDSAEERGISVDPARLSSLLGCPVIP MVASRGEGVAELKAAIAKGFTTGGASAPGSKVRFPAELDEAIRRVAESTANHARAFGYDPGWFAMKLLEHDHELEARLDG ATRSSLAEERERTADALGDDPDIVIADAHYRLVSDLSAAAITRKESTEKSLSDKIDSLVLNRFLGIPLFLGVMYLMFLFT INLGGAFIDFFDIAAGALFVDGFGRVLGAVGSPEWLTVLLASGVGGALQTMATFIPPIGFMFIFLSILEDSGYMARAAYV MDRGMRAVGLPGKAFIPLLVGFGCNVPAIMSARTMSDERDRIMTVMMTPFMSCGARMPVYALFAAAFFPTGGQNLVFLLY LMGIAVAIMTGFILKKTLLKGDPSPFIMEMPPYHLPTFKGVALRVGDRLGSFLVKAGKVLVPVIVVLGFMNSIGTDGSFG NEESDNSVLAATGKALVPVFQPFGVQEENWPAAVGLFTGVFAKEAVVGTLDNLYAAMDANDMADGSDEGFSLMASLGEAF ATIPENLAGIAGSLLDPLGINVGDRGAVAEEQGVGSSIFGSMVNLFDGTAGAFAYLVFILLYFPCVAAIAAVYRETNLAW TLFAGAWTTGLAYVFAVLSYQIGTWGAHPGTSAAWVAVMLLVLAVAVTLMYLAGNGAFSKREGA
Sequences:
>Translated_784_residues MELAAQKQRTSAKALASPLQRIVAVVGNPNCGKTTLFNALTGLNQRVGNWPGVTVDKKTGRFRHDGEEYELVDLPGIYSL SSLSQDEEVARSYILSGEAGLVVNIVDASNPDRNLYLTSRLLEMGVPVVVALNMVDSAEERGISVDPARLSSLLGCPVIP MVASRGEGVAELKAAIAKGFTTGGASAPGSKVRFPAELDEAIRRVAESTANHARAFGYDPGWFAMKLLEHDHELEARLDG ATRSSLAEERERTADALGDDPDIVIADAHYRLVSDLSAAAITRKESTEKSLSDKIDSLVLNRFLGIPLFLGVMYLMFLFT INLGGAFIDFFDIAAGALFVDGFGRVLGAVGSPEWLTVLLASGVGGALQTMATFIPPIGFMFIFLSILEDSGYMARAAYV MDRGMRAVGLPGKAFIPLLVGFGCNVPAIMSARTMSDERDRIMTVMMTPFMSCGARMPVYALFAAAFFPTGGQNLVFLLY LMGIAVAIMTGFILKKTLLKGDPSPFIMEMPPYHLPTFKGVALRVGDRLGSFLVKAGKVLVPVIVVLGFMNSIGTDGSFG NEESDNSVLAATGKALVPVFQPFGVQEENWPAAVGLFTGVFAKEAVVGTLDNLYAAMDANDMADGSDEGFSLMASLGEAF ATIPENLAGIAGSLLDPLGINVGDRGAVAEEQGVGSSIFGSMVNLFDGTAGAFAYLVFILLYFPCVAAIAAVYRETNLAW TLFAGAWTTGLAYVFAVLSYQIGTWGAHPGTSAAWVAVMLLVLAVAVTLMYLAGNGAFSKREGA >Mature_784_residues MELAAQKQRTSAKALASPLQRIVAVVGNPNCGKTTLFNALTGLNQRVGNWPGVTVDKKTGRFRHDGEEYELVDLPGIYSL SSLSQDEEVARSYILSGEAGLVVNIVDASNPDRNLYLTSRLLEMGVPVVVALNMVDSAEERGISVDPARLSSLLGCPVIP MVASRGEGVAELKAAIAKGFTTGGASAPGSKVRFPAELDEAIRRVAESTANHARAFGYDPGWFAMKLLEHDHELEARLDG ATRSSLAEERERTADALGDDPDIVIADAHYRLVSDLSAAAITRKESTEKSLSDKIDSLVLNRFLGIPLFLGVMYLMFLFT INLGGAFIDFFDIAAGALFVDGFGRVLGAVGSPEWLTVLLASGVGGALQTMATFIPPIGFMFIFLSILEDSGYMARAAYV MDRGMRAVGLPGKAFIPLLVGFGCNVPAIMSARTMSDERDRIMTVMMTPFMSCGARMPVYALFAAAFFPTGGQNLVFLLY LMGIAVAIMTGFILKKTLLKGDPSPFIMEMPPYHLPTFKGVALRVGDRLGSFLVKAGKVLVPVIVVLGFMNSIGTDGSFG NEESDNSVLAATGKALVPVFQPFGVQEENWPAAVGLFTGVFAKEAVVGTLDNLYAAMDANDMADGSDEGFSLMASLGEAF ATIPENLAGIAGSLLDPLGINVGDRGAVAEEQGVGSSIFGSMVNLFDGTAGAFAYLVFILLYFPCVAAIAAVYRETNLAW TLFAGAWTTGLAYVFAVLSYQIGTWGAHPGTSAAWVAVMLLVLAVAVTLMYLAGNGAFSKREGA
Specific function: Fe(2+) uptake system, probably driven by GTP [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=767, Percent_Identity=42.503259452412, Blast_Score=587, Evalue=1e-169,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 83126; Mature: 83126
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELAAQKQRTSAKALASPLQRIVAVVGNPNCGKTTLFNALTGLNQRVGNWPGVTVDKKTG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCC RFRHDGEEYELVDLPGIYSLSSLSQDEEVARSYILSGEAGLVVNIVDASNPDRNLYLTSR CCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH LLEMGVPVVVALNMVDSAEERGISVDPARLSSLLGCPVIPMVASRGEGVAELKAAIAKGF HHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCC TTGGASAPGSKVRFPAELDEAIRRVAESTANHARAFGYDPGWFAMKLLEHDHELEARLDG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCC ATRSSLAEERERTADALGDDPDIVIADAHYRLVSDLSAAAITRKESTEKSLSDKIDSLVL HHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRFLGIPLFLGVMYLMFLFTINLGGAFIDFFDIAAGALFVDGFGRVLGAVGSPEWLTVLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ASGVGGALQTMATFIPPIGFMFIFLSILEDSGYMARAAYVMDRGMRAVGLPGKAFIPLLV HHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCHHHHHHHH GFGCNVPAIMSARTMSDERDRIMTVMMTPFMSCGARMPVYALFAAAFFPTGGQNLVFLLY HCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHH LMGIAVAIMTGFILKKTLLKGDPSPFIMEMPPYHLPTFKGVALRVGDRLGSFLVKAGKVL HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VPVIVVLGFMNSIGTDGSFGNEESDNSVLAATGKALVPVFQPFGVQEENWPAAVGLFTGV HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHH FAKEAVVGTLDNLYAAMDANDMADGSDEGFSLMASLGEAFATIPENLAGIAGSLLDPLGI HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NVGDRGAVAEEQGVGSSIFGSMVNLFDGTAGAFAYLVFILLYFPCVAAIAAVYRETNLAW CCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE TLFAGAWTTGLAYVFAVLSYQIGTWGAHPGTSAAWVAVMLLVLAVAVTLMYLAGNGAFSK EEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC REGA CCCC >Mature Secondary Structure MELAAQKQRTSAKALASPLQRIVAVVGNPNCGKTTLFNALTGLNQRVGNWPGVTVDKKTG CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCC RFRHDGEEYELVDLPGIYSLSSLSQDEEVARSYILSGEAGLVVNIVDASNPDRNLYLTSR CCCCCCCCEEEEECCCCCCHHHCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHH LLEMGVPVVVALNMVDSAEERGISVDPARLSSLLGCPVIPMVASRGEGVAELKAAIAKGF HHHHCCCCEEEHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHCC TTGGASAPGSKVRFPAELDEAIRRVAESTANHARAFGYDPGWFAMKLLEHDHELEARLDG CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHCC ATRSSLAEERERTADALGDDPDIVIADAHYRLVSDLSAAAITRKESTEKSLSDKIDSLVL HHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NRFLGIPLFLGVMYLMFLFTINLGGAFIDFFDIAAGALFVDGFGRVLGAVGSPEWLTVLL HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ASGVGGALQTMATFIPPIGFMFIFLSILEDSGYMARAAYVMDRGMRAVGLPGKAFIPLLV HHCCCHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCCHHHHHHHH GFGCNVPAIMSARTMSDERDRIMTVMMTPFMSCGARMPVYALFAAAFFPTGGQNLVFLLY HCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCHHHHHHH LMGIAVAIMTGFILKKTLLKGDPSPFIMEMPPYHLPTFKGVALRVGDRLGSFLVKAGKVL HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH VPVIVVLGFMNSIGTDGSFGNEESDNSVLAATGKALVPVFQPFGVQEENWPAAVGLFTGV HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCHHHHHHHHH FAKEAVVGTLDNLYAAMDANDMADGSDEGFSLMASLGEAFATIPENLAGIAGSLLDPLGI HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC NVGDRGAVAEEQGVGSSIFGSMVNLFDGTAGAFAYLVFILLYFPCVAAIAAVYRETNLAW CCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE TLFAGAWTTGLAYVFAVLSYQIGTWGAHPGTSAAWVAVMLLVLAVAVTLMYLAGNGAFSK EEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC REGA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA