Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213062
Identifier: 193213062
GI number: 193213062
Start: 1545621
End: 1546961
Strand: Direct
Name: 193213062
Synonym: Cpar_1415
Alternate gene names: NA
Gene position: 1545621-1546961 (Clockwise)
Preceding gene: 193213061
Following gene: 193213063
Centisome position: 67.52
GC content: 59.66
Gene sequence:
>1341_bases ATGCACGCTGAAAAACACCTTTTCTCCACGAACGCGTTTTTAGGCAAGTTCCTCAGAAAAAAAGCCGTGGAGCGCCTTTT TGCAAGCAAAACCCGCGAGGCTGCGGTAGCTCTGGCAGAAGCGGTTGAAAAGGCGCATCCGGAAGCAGATGAGATCTTCA AGCGCCTGCTGAACCTGCGGCACAGCAGCGAAACAGTGATGCACACAGCGGTGTGGAACTACTGGAAATCGCGGCGTTTC GAGGAGCTGCTGAAAAGAACGGAAGCATCGAAATCGTTTGAGTCGGACTTATTGCAAGCGCTCGAAGCCATGCCGAAGAA CGACTGGGGCAGCGGCTTGCTGTTCGCGCTCTGGAGCCAGCTCGACCGTGATGACATCGCCGCGATGATCGAGGCACAGG GCCGCCATGCGCCCGCGCTGGAAATGGATGCGCTGTTCGGGCTGGTGCGCGGCAACCCGGAGCGCTACCTGAACTTCGAA GACCCCGACTACTCCATTTTCGAAAAAGCCTGGCTCGCCGCATCGAGCGTTCAGCGGCAGCGCATCAGCCTGACGGTGCT CAACAGCCAGCAGTCCCGCCTGATTGCGGCCTACGACCACGCCGTCCGCGACGAGCACGATCCACAGCTGGTCATCGAAG CCCTCAAGCTCTGCGGAGACCACGACGCGCTGTTCGACCGCTTGCGGGGATTGCCGTTCAACGGCGCACTCGAAGTGATC GCGTTCTGGGCGGAAAGCAGTAGCAGGCCGAAAGCTCCCGCCAAAGCCGCCATTGTCGGGCAGGCAGTCGCGCTGTTCCG TGAAGTTACCGAGCTGCTTCCGGAAGCCCGCCGGTCCACACCTCCGGGGACACGAGAGATTTTTGAGTTCTGGACGGAGC GTTATCAGAGCGACGAATCGATCCGGCAGGATTTGTCAAGCCCCGATCCATTCCGACGTGCTGGAGCGCTCTACTGCGGT GCGCAGCGGAATTTGATCCCTCGCAGTCAACTTAGGGAGATTTCGGTGAACGGCACGTGGCCTGAAAAGCTCGCCGTGCA ATACCTGTTCAACGCACCGGATGAAAGCGCGCGAAATGAGCATGTGTTGTGGCTTCGTCCGCAGGACAACGTCGTGGCGG GCATCCTCTCGATGCGCCTGCCCGGAACGCTTGAAGAGAGCAGCCGGTTGACTGATCAGCTCCGAAGCGCGTCCGAAGAG GACTATCGGCACAAGCTCCTGCAACTGCTCACGCTCTTTCAAAGCTACTTCCTGCGTGGCCTCATCACCGTTGACAGCAG CGACGACGCCACGGAAAGCAACGCGGTGGAGACGGAGGAGGTGACCGATGTGGAGTGGTAG
Upstream 100 bases:
>100_bases CTCGCTGCGCATCACCATCAAAACCTTCCTCCGGCTTGATAAAAAGTGATCTATGTATCATCTTTTGCATCAACCATTTT TAGACGCCGGACAAAGAGTC
Downstream 100 bases:
>100_bases GGGCATCTTGCAACGCCTTTTTGCAGCCCTGAAAGGTGACGATCGCGCTGAAACCCAGGCCATCGCCACGTTGCGACTCG AACTTGCCGAACGTGATGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 446; Mature: 446
Protein sequence:
>446_residues MHAEKHLFSTNAFLGKFLRKKAVERLFASKTREAAVALAEAVEKAHPEADEIFKRLLNLRHSSETVMHTAVWNYWKSRRF EELLKRTEASKSFESDLLQALEAMPKNDWGSGLLFALWSQLDRDDIAAMIEAQGRHAPALEMDALFGLVRGNPERYLNFE DPDYSIFEKAWLAASSVQRQRISLTVLNSQQSRLIAAYDHAVRDEHDPQLVIEALKLCGDHDALFDRLRGLPFNGALEVI AFWAESSSRPKAPAKAAIVGQAVALFREVTELLPEARRSTPPGTREIFEFWTERYQSDESIRQDLSSPDPFRRAGALYCG AQRNLIPRSQLREISVNGTWPEKLAVQYLFNAPDESARNEHVLWLRPQDNVVAGILSMRLPGTLEESSRLTDQLRSASEE DYRHKLLQLLTLFQSYFLRGLITVDSSDDATESNAVETEEVTDVEW
Sequences:
>Translated_446_residues MHAEKHLFSTNAFLGKFLRKKAVERLFASKTREAAVALAEAVEKAHPEADEIFKRLLNLRHSSETVMHTAVWNYWKSRRF EELLKRTEASKSFESDLLQALEAMPKNDWGSGLLFALWSQLDRDDIAAMIEAQGRHAPALEMDALFGLVRGNPERYLNFE DPDYSIFEKAWLAASSVQRQRISLTVLNSQQSRLIAAYDHAVRDEHDPQLVIEALKLCGDHDALFDRLRGLPFNGALEVI AFWAESSSRPKAPAKAAIVGQAVALFREVTELLPEARRSTPPGTREIFEFWTERYQSDESIRQDLSSPDPFRRAGALYCG AQRNLIPRSQLREISVNGTWPEKLAVQYLFNAPDESARNEHVLWLRPQDNVVAGILSMRLPGTLEESSRLTDQLRSASEE DYRHKLLQLLTLFQSYFLRGLITVDSSDDATESNAVETEEVTDVEW >Mature_446_residues MHAEKHLFSTNAFLGKFLRKKAVERLFASKTREAAVALAEAVEKAHPEADEIFKRLLNLRHSSETVMHTAVWNYWKSRRF EELLKRTEASKSFESDLLQALEAMPKNDWGSGLLFALWSQLDRDDIAAMIEAQGRHAPALEMDALFGLVRGNPERYLNFE DPDYSIFEKAWLAASSVQRQRISLTVLNSQQSRLIAAYDHAVRDEHDPQLVIEALKLCGDHDALFDRLRGLPFNGALEVI AFWAESSSRPKAPAKAAIVGQAVALFREVTELLPEARRSTPPGTREIFEFWTERYQSDESIRQDLSSPDPFRRAGALYCG AQRNLIPRSQLREISVNGTWPEKLAVQYLFNAPDESARNEHVLWLRPQDNVVAGILSMRLPGTLEESSRLTDQLRSASEE DYRHKLLQLLTLFQSYFLRGLITVDSSDDATESNAVETEEVTDVEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50744; Mature: 50744
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAEKHLFSTNAFLGKFLRKKAVERLFASKTREAAVALAEAVEKAHPEADEIFKRLLNLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC HSSETVMHTAVWNYWKSRRFEELLKRTEASKSFESDLLQALEAMPKNDWGSGLLFALWSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LDRDDIAAMIEAQGRHAPALEMDALFGLVRGNPERYLNFEDPDYSIFEKAWLAASSVQRQ CCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH RISLTVLNSQQSRLIAAYDHAVRDEHDPQLVIEALKLCGDHDALFDRLRGLPFNGALEVI HEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH AFWAESSSRPKAPAKAAIVGQAVALFREVTELLPEARRSTPPGTREIFEFWTERYQSDES HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHH IRQDLSSPDPFRRAGALYCGAQRNLIPRSQLREISVNGTWPEKLAVQYLFNAPDESARNE HHHHCCCCCHHHHHCCEEECCCCCCCCHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCCC HVLWLRPQDNVVAGILSMRLPGTLEESSRLTDQLRSASEEDYRHKLLQLLTLFQSYFLRG CEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LITVDSSDDATESNAVETEEVTDVEW EEEECCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MHAEKHLFSTNAFLGKFLRKKAVERLFASKTREAAVALAEAVEKAHPEADEIFKRLLNLR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHC HSSETVMHTAVWNYWKSRRFEELLKRTEASKSFESDLLQALEAMPKNDWGSGLLFALWSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH LDRDDIAAMIEAQGRHAPALEMDALFGLVRGNPERYLNFEDPDYSIFEKAWLAASSVQRQ CCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHH RISLTVLNSQQSRLIAAYDHAVRDEHDPQLVIEALKLCGDHDALFDRLRGLPFNGALEVI HEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHH AFWAESSSRPKAPAKAAIVGQAVALFREVTELLPEARRSTPPGTREIFEFWTERYQSDES HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHH IRQDLSSPDPFRRAGALYCGAQRNLIPRSQLREISVNGTWPEKLAVQYLFNAPDESARNE HHHHCCCCCHHHHHCCEEECCCCCCCCHHHHHEECCCCCCHHHHHHHHHHCCCCCCCCCC HVLWLRPQDNVVAGILSMRLPGTLEESSRLTDQLRSASEEDYRHKLLQLLTLFQSYFLRG CEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LITVDSSDDATESNAVETEEVTDVEW EEEECCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA