Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is 193213032
Identifier: 193213032
GI number: 193213032
Start: 1508870
End: 1509487
Strand: Direct
Name: 193213032
Synonym: Cpar_1384
Alternate gene names: NA
Gene position: 1508870-1509487 (Clockwise)
Preceding gene: 193213031
Following gene: 193213036
Centisome position: 65.91
GC content: 37.7
Gene sequence:
>618_bases ATGCACCTTTTGCGAATCAATCTTATTAATGTTAGACGTATGGATAAGCAAGTACCGAGAGAATGGCGTAGGTATGAATA CTTTAATCCGAAAATAGTACTACCAAAGCTTCGGAAAATCCGAGAAGAAATATCAATAACGAACACACCTGATAAAATAA AGGCACTACGAACAAATAAGCTAAAACGAGAACGTGAAAGTTGGGATGCAGCAATATTTTGCCAACTACTTTCACTGACA TTAAAAAAAGATATTTTATTTTCGCGCGAGGAGCACTCGGATTTCGATTCAATATTCACATGGAATGATGGGGAAGTACA GAGTTTCGCACCTATCCAGCTTAAAGAGCTTGTTCCGGCATATGCAAACCCAAATGCCAACCTCCAAAATATCATCAATA GTTTGTCGAAATATTCTGGAAGCGATGATCTTATAGTAGGTATTAAAATAAATCGAAGGGAAAGAATAGAATTTTCAGAT ATTGATACGGATGGCTTAAAAATTCGTGAGCTTTGGATGTTTGGAGCCACAACGGAAAGTCAAAGTCATTGGAGTTTGTT AGGTGAGGTAATGTCAGGGAAGGTGCATCAGTATGAGTACGAGCTACCATACATCTAA
Upstream 100 bases:
>100_bases GCGATCTGGTAAAGTTCAGACAATTCCGGGTGATGAGGTCTTTGCGAAGGTTTGGAAAAGGTTTGAAGCATGAACTTTTC TTTTCACCCTATCAAAAAAA
Downstream 100 bases:
>100_bases CACATCACCCCAGTCGGACGGCCTCACCGCCCCTAGTGTCATGTCTCCGCAAAACTGTCTCATCAAAGACCAGAAATCCT TTATTAAATCATTTACTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MHLLRINLINVRRMDKQVPREWRRYEYFNPKIVLPKLRKIREEISITNTPDKIKALRTNKLKRERESWDAAIFCQLLSLT LKKDILFSREEHSDFDSIFTWNDGEVQSFAPIQLKELVPAYANPNANLQNIINSLSKYSGSDDLIVGIKINRRERIEFSD IDTDGLKIRELWMFGATTESQSHWSLLGEVMSGKVHQYEYELPYI
Sequences:
>Translated_205_residues MHLLRINLINVRRMDKQVPREWRRYEYFNPKIVLPKLRKIREEISITNTPDKIKALRTNKLKRERESWDAAIFCQLLSLT LKKDILFSREEHSDFDSIFTWNDGEVQSFAPIQLKELVPAYANPNANLQNIINSLSKYSGSDDLIVGIKINRRERIEFSD IDTDGLKIRELWMFGATTESQSHWSLLGEVMSGKVHQYEYELPYI >Mature_205_residues MHLLRINLINVRRMDKQVPREWRRYEYFNPKIVLPKLRKIREEISITNTPDKIKALRTNKLKRERESWDAAIFCQLLSLT LKKDILFSREEHSDFDSIFTWNDGEVQSFAPIQLKELVPAYANPNANLQNIINSLSKYSGSDDLIVGIKINRRERIEFSD IDTDGLKIRELWMFGATTESQSHWSLLGEVMSGKVHQYEYELPYI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24202; Mature: 24202
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLLRINLINVRRMDKQVPREWRRYEYFNPKIVLPKLRKIREEISITNTPDKIKALRTNK CEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHH LKRERESWDAAIFCQLLSLTLKKDILFSREEHSDFDSIFTWNDGEVQSFAPIQLKELVPA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEHHHHCCC YANPNANLQNIINSLSKYSGSDDLIVGIKINRRERIEFSDIDTDGLKIRELWMFGATTES CCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCEEEEEEEECCCCCC QSHWSLLGEVMSGKVHQYEYELPYI CHHHHHHHHHHCCCEEEEEECCCCC >Mature Secondary Structure MHLLRINLINVRRMDKQVPREWRRYEYFNPKIVLPKLRKIREEISITNTPDKIKALRTNK CEEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHCCCCCHHHHHHHHHHH LKRERESWDAAIFCQLLSLTLKKDILFSREEHSDFDSIFTWNDGEVQSFAPIQLKELVPA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCEEHHHHCCC YANPNANLQNIINSLSKYSGSDDLIVGIKINRRERIEFSDIDTDGLKIRELWMFGATTES CCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEECCCCCCCCEEEEEEEECCCCCC QSHWSLLGEVMSGKVHQYEYELPYI CHHHHHHHHHHCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA