Definition | Chlorobaculum parvum NCIB 8327 chromosome, complete genome. |
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Accession | NC_011027 |
Length | 2,289,249 |
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The map label for this gene is ygaP [C]
Identifier: 193213024
GI number: 193213024
Start: 1495546
End: 1495935
Strand: Direct
Name: ygaP [C]
Synonym: Cpar_1376
Alternate gene names: 193213024
Gene position: 1495546-1495935 (Clockwise)
Preceding gene: 193213022
Following gene: 193213025
Centisome position: 65.33
GC content: 51.79
Gene sequence:
>390_bases ATGGCCAAGGCAAACAGGAACAATGTCAAAAATATCGCCCCGTCAGAAGCGCTCTCCATGATCAGAAAAGGGGCTTTGCT GGTCGATGTCCGGGAAAACCGTGAAATTGACCGAAAGGCGTTCGATGTGGAAGAGTTCATGTCGGTGCCGATGAGCAAGT TCCAGAGCCAGCTTCATGAAATCCCAACTGGACGCAAGGTCATTATTGCCTGCCACAGCGGTAGCCGAAGCGGGATGGCC TCGAAAATGCTGGCAAACCAGGGTCATAAAAAAGTGCACAATATGCAGAGCGGCCTCATCCGCTGGGAACGCGAAGGGCT GCCGGTAAAGAAAAAGCCCTCACAGAGCCCATTCGCATGGATTACGAAGATGTTTCGCCGGAAATCATAA
Upstream 100 bases:
>100_bases TTGCTCTTCCCGCCGATATTTTGTAATATCTCTGCCCATAAACGAAACCGTACTGTCAAAACGCGAGCCTCACCAAACAT TCAATCCAAGCAGTTACATT
Downstream 100 bases:
>100_bases CTGACGAAGTAAGCATTTTCTATGACCCGCCTCTGCGCCCCTCTTTTGCCGTGGCCGAGCTTGACGTGAGCAATTCTTTT TTTGAGGTCATTGTCTATAG
Product: Rhodanese domain-containing protein
Products: NA
Alternate protein names: Rhodanese Domain Protein; Rhodanese-Like Protein; Thiosulfate Sulfurtransferase; Transferase/Hydrolase; Rhodanese-Like Domain-Containing Protein; Metallo-Beta-Lactamase Domain Protein
Number of amino acids: Translated: 129; Mature: 128
Protein sequence:
>129_residues MAKANRNNVKNIAPSEALSMIRKGALLVDVRENREIDRKAFDVEEFMSVPMSKFQSQLHEIPTGRKVIIACHSGSRSGMA SKMLANQGHKKVHNMQSGLIRWEREGLPVKKKPSQSPFAWITKMFRRKS
Sequences:
>Translated_129_residues MAKANRNNVKNIAPSEALSMIRKGALLVDVRENREIDRKAFDVEEFMSVPMSKFQSQLHEIPTGRKVIIACHSGSRSGMA SKMLANQGHKKVHNMQSGLIRWEREGLPVKKKPSQSPFAWITKMFRRKS >Mature_128_residues AKANRNNVKNIAPSEALSMIRKGALLVDVRENREIDRKAFDVEEFMSVPMSKFQSQLHEIPTGRKVIIACHSGSRSGMAS KMLANQGHKKVHNMQSGLIRWEREGLPVKKKPSQSPFAWITKMFRRKS
Specific function: Unknown
COG id: COG0607
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14675; Mature: 14544
Theoretical pI: Translated: 11.40; Mature: 11.40
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 6.2 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKANRNNVKNIAPSEALSMIRKGALLVDVRENREIDRKAFDVEEFMSVPMSKFQSQLHE CCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHHHCCHHHHHHHHHH IPTGRKVIIACHSGSRSGMASKMLANQGHKKVHNMQSGLIRWEREGLPVKKKPSQSPFAW CCCCCEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH ITKMFRRKS HHHHHHCCC >Mature Secondary Structure AKANRNNVKNIAPSEALSMIRKGALLVDVRENREIDRKAFDVEEFMSVPMSKFQSQLHE CCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHCCHHHHHHCCHHHHHHHHHH IPTGRKVIIACHSGSRSGMASKMLANQGHKKVHNMQSGLIRWEREGLPVKKKPSQSPFAW CCCCCEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH ITKMFRRKS HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA